RNA–Protein interactions for RNA: ENST00000559148.1

AC073941.1-201, humanhuman

TSL 4 BASIC

Gene AC073941.1, Length 539 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC073941.1-201ENST00000559148 AEBP2Q6ZN18 517 aaPredicted RBP23.31■■□□□ 1.32
AC073941.1-201ENST00000559148 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
AC073941.1-201ENST00000559148 SENP3Q9H4L4 574 aaPredicted RBP19.48■□□□□ 0.71
AC073941.1-201ENST00000559148 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
AC073941.1-201ENST00000559148 FOXD1Q16676 465 aa18.45■□□□□ 0.54
AC073941.1-201ENST00000559148 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
AC073941.1-201ENST00000559148 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
AC073941.1-201ENST00000559148 ADRA2BP18089 450 aa17.2■□□□□ 0.34
AC073941.1-201ENST00000559148 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
AC073941.1-201ENST00000559148 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
AC073941.1-201ENST00000559148 MSH5O43196 834 aa16.96■□□□□ 0.31
AC073941.1-201ENST00000559148 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
AC073941.1-201ENST00000559148 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
AC073941.1-201ENST00000559148 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
AC073941.1-201ENST00000559148 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
AC073941.1-201ENST00000559148 HOXD11P31277 338 aaPredicted RBP14.93□□□□□ -0.02
AC073941.1-201ENST00000559148 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
AC073941.1-201ENST00000559148 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
AC073941.1-201ENST00000559148 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
AC073941.1-201ENST00000559148 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
AC073941.1-201ENST00000559148 RNF216Q9NWF9 866 aaPredicted RBP14.72□□□□□ -0.05
AC073941.1-201ENST00000559148 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
AC073941.1-201ENST00000559148 KCNA4P22459 653 aa14.48□□□□□ -0.09
AC073941.1-201ENST00000559148 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
AC073941.1-201ENST00000559148 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
AC073941.1-201ENST00000559148 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
AC073941.1-201ENST00000559148 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
AC073941.1-201ENST00000559148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.15□□□□□ -0.14
AC073941.1-201ENST00000559148 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
AC073941.1-201ENST00000559148 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
AC073941.1-201ENST00000559148 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
AC073941.1-201ENST00000559148 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
AC073941.1-201ENST00000559148 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
AC073941.1-201ENST00000559148 DSG3P32926 999 aa13.74□□□□□ -0.21
AC073941.1-201ENST00000559148 CAPN15O75808 1086 aa13.7□□□□□ -0.22
AC073941.1-201ENST00000559148 ABCB7O75027 752 aa13.54□□□□□ -0.24
AC073941.1-201ENST00000559148 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
AC073941.1-201ENST00000559148 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
AC073941.1-201ENST00000559148 ZBTB22O15209 634 aa13.32□□□□□ -0.28
AC073941.1-201ENST00000559148 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
AC073941.1-201ENST00000559148 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
AC073941.1-201ENST00000559148 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
AC073941.1-201ENST00000559148 ZNF219Q9P2Y4 722 aaPredicted RBP13.26□□□□□ -0.29
AC073941.1-201ENST00000559148 CCDC180Q9P1Z9 1646 aa13.24□□□□□ -0.29
AC073941.1-201ENST00000559148 POTEHQ6S545 545 aa13.24□□□□□ -0.29
AC073941.1-201ENST00000559148 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
AC073941.1-201ENST00000559148 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
AC073941.1-201ENST00000559148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
AC073941.1-201ENST00000559148 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
AC073941.1-201ENST00000559148 POLA2Q14181 598 aa13.14□□□□□ -0.31
AC073941.1-201ENST00000559148 APLP2Q06481 763 aa13.12□□□□□ -0.31
AC073941.1-201ENST00000559148 ABCC9O60706 1549 aa12.98□□□□□ -0.33
AC073941.1-201ENST00000559148 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
AC073941.1-201ENST00000559148 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
AC073941.1-201ENST00000559148 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
AC073941.1-201ENST00000559148 RBM42Q9BTD8 480 aaKnown RBP12.78□□□□□ -0.36
AC073941.1-201ENST00000559148 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
AC073941.1-201ENST00000559148 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
AC073941.1-201ENST00000559148 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
AC073941.1-201ENST00000559148 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
AC073941.1-201ENST00000559148 AKT1S1Q96B36 256 aa12.59□□□□□ -0.39
AC073941.1-201ENST00000559148 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
AC073941.1-201ENST00000559148 PIP4P2Q8N4L2 257 aa12.54□□□□□ -0.4
AC073941.1-201ENST00000559148 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
AC073941.1-201ENST00000559148 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
AC073941.1-201ENST00000559148 NACADO15069 1562 aa12.43□□□□□ -0.42
AC073941.1-201ENST00000559148 EVX2Q03828 476 aa12.41□□□□□ -0.42
AC073941.1-201ENST00000559148 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
AC073941.1-201ENST00000559148 ZCCHC6Q5VYS8 1495 aaKnown RBP12.37□□□□□ -0.43
AC073941.1-201ENST00000559148 DCAF8L2P0C7V8 631 aa12.36□□□□□ -0.43
AC073941.1-201ENST00000559148 MYO15BQ96JP2 1530 aa12.34□□□□□ -0.43
AC073941.1-201ENST00000559148 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
AC073941.1-201ENST00000559148 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
AC073941.1-201ENST00000559148 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
AC073941.1-201ENST00000559148 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
AC073941.1-201ENST00000559148 DCAF1Q9Y4B6 1507 aa12.27□□□□□ -0.44
AC073941.1-201ENST00000559148 FBLN2P98095 1184 aa12.27□□□□□ -0.45
AC073941.1-201ENST00000559148 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
AC073941.1-201ENST00000559148 UNC13AQ9UPW8 1703 aa12.24□□□□□ -0.45
AC073941.1-201ENST00000559148 HAX1O00165 279 aa12.23□□□□□ -0.45
AC073941.1-201ENST00000559148 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
AC073941.1-201ENST00000559148 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
AC073941.1-201ENST00000559148 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
AC073941.1-201ENST00000559148 PRKAR2AP13861 404 aaKnown RBP12.16□□□□□ -0.46
AC073941.1-201ENST00000559148 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
AC073941.1-201ENST00000559148 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
AC073941.1-201ENST00000559148 SCRIBQ14160 1630 aa12.08□□□□□ -0.48
AC073941.1-201ENST00000559148 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
AC073941.1-201ENST00000559148 FKBP8Q14318 412 aa12.01□□□□□ -0.49
AC073941.1-201ENST00000559148 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
AC073941.1-201ENST00000559148 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
AC073941.1-201ENST00000559148 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
AC073941.1-201ENST00000559148 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
AC073941.1-201ENST00000559148 GABBR2O75899 941 aa11.89□□□□□ -0.51
AC073941.1-201ENST00000559148 PRKCSHP14314 528 aaPredicted RBP11.89□□□□□ -0.51
AC073941.1-201ENST00000559148 POTEIP0CG38 1075 aa11.81□□□□□ -0.52
AC073941.1-201ENST00000559148 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
AC073941.1-201ENST00000559148 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
AC073941.1-201ENST00000559148 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
AC073941.1-201ENST00000559148 CC2D2AQ9P2K1 1620 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms