RNA–Protein interactions for RNA: ENST00000558934.1

SPPL2A-204, Transcript of signal peptide peptidase like 2A, humanhuman

TSL 5

Gene SPPL2A, Length 1,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-204ENST00000558934 AEBP2Q6ZN18 517 aaPredicted RBP23.05■■□□□ 1.28
SPPL2A-204ENST00000558934 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
SPPL2A-204ENST00000558934 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
SPPL2A-204ENST00000558934 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
SPPL2A-204ENST00000558934 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
SPPL2A-204ENST00000558934 FOXD1Q16676 465 aa18.57■□□□□ 0.56
SPPL2A-204ENST00000558934 NISCHQ9Y2I1 1504 aa18.25■□□□□ 0.51
SPPL2A-204ENST00000558934 MSH5O43196 834 aa17.74■□□□□ 0.43
SPPL2A-204ENST00000558934 PLPPR3Q6T4P5 718 aa17.7■□□□□ 0.42
SPPL2A-204ENST00000558934 PIAS4Q8N2W9 510 aaPredicted RBP17.15■□□□□ 0.34
SPPL2A-204ENST00000558934 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
SPPL2A-204ENST00000558934 ADRA2BP18089 450 aa17.05■□□□□ 0.32
SPPL2A-204ENST00000558934 CCDC180Q9P1Z9 1646 aa16.08■□□□□ 0.16
SPPL2A-204ENST00000558934 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
SPPL2A-204ENST00000558934 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
SPPL2A-204ENST00000558934 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
SPPL2A-204ENST00000558934 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
SPPL2A-204ENST00000558934 ABCC9O60706 1549 aa15.54■□□□□ 0.08
SPPL2A-204ENST00000558934 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.08
SPPL2A-204ENST00000558934 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.03
SPPL2A-204ENST00000558934 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
SPPL2A-204ENST00000558934 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
SPPL2A-204ENST00000558934 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0
SPPL2A-204ENST00000558934 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
SPPL2A-204ENST00000558934 NACADO15069 1562 aa15.04■□□□□ -0
SPPL2A-204ENST00000558934 MYO15BQ96JP2 1530 aa15.04■□□□□ -0
SPPL2A-204ENST00000558934 RNF39Q9H2S5 420 aa15.03■□□□□ -0
SPPL2A-204ENST00000558934 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
SPPL2A-204ENST00000558934 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
SPPL2A-204ENST00000558934 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
SPPL2A-204ENST00000558934 RNF216Q9NWF9 866 aaPredicted RBP14.98□□□□□ -0.01
SPPL2A-204ENST00000558934 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
SPPL2A-204ENST00000558934 UNC13AQ9UPW8 1703 aa14.77□□□□□ -0.04
SPPL2A-204ENST00000558934 NPM3O75607 178 aaKnown RBP14.77□□□□□ -0.04
SPPL2A-204ENST00000558934 SCRIBQ14160 1630 aa14.74□□□□□ -0.05
SPPL2A-204ENST00000558934 KCNA4P22459 653 aa14.73□□□□□ -0.05
SPPL2A-204ENST00000558934 BICRAQ9NZM4 1560 aa14.65□□□□□ -0.06
SPPL2A-204ENST00000558934 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
SPPL2A-204ENST00000558934 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
SPPL2A-204ENST00000558934 POTEHQ6S545 545 aa14.52□□□□□ -0.08
SPPL2A-204ENST00000558934 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
SPPL2A-204ENST00000558934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.33□□□□□ -0.11
SPPL2A-204ENST00000558934 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
SPPL2A-204ENST00000558934 EIF4G1Q04637 1599 aaKnown RBP14.18□□□□□ -0.14
SPPL2A-204ENST00000558934 SMARCA4P51532 1647 aa14.11□□□□□ -0.15
SPPL2A-204ENST00000558934 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
SPPL2A-204ENST00000558934 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
SPPL2A-204ENST00000558934 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.16
SPPL2A-204ENST00000558934 RSF1Q96T23 1441 aaPredicted RBP14.02□□□□□ -0.17
SPPL2A-204ENST00000558934 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
SPPL2A-204ENST00000558934 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
SPPL2A-204ENST00000558934 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
SPPL2A-204ENST00000558934 ATAD2BQ9ULI0 1458 aa13.98□□□□□ -0.17
SPPL2A-204ENST00000558934 WIZO95785 1651 aa13.97□□□□□ -0.17
SPPL2A-204ENST00000558934 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.17
SPPL2A-204ENST00000558934 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
SPPL2A-204ENST00000558934 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
SPPL2A-204ENST00000558934 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
SPPL2A-204ENST00000558934 BAZ1BQ9UIG0 1483 aaKnown RBP13.83□□□□□ -0.2
SPPL2A-204ENST00000558934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
SPPL2A-204ENST00000558934 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
SPPL2A-204ENST00000558934 DSG3P32926 999 aa13.8□□□□□ -0.2
SPPL2A-204ENST00000558934 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
SPPL2A-204ENST00000558934 TOP2AP11388 1531 aaKnown RBP13.79□□□□□ -0.2
SPPL2A-204ENST00000558934 APLP2Q06481 763 aa13.76□□□□□ -0.21
SPPL2A-204ENST00000558934 CAPN15O75808 1086 aa13.73□□□□□ -0.21
SPPL2A-204ENST00000558934 SPINK5Q9NQ38 1064 aaPredicted RBP13.72□□□□□ -0.21
SPPL2A-204ENST00000558934 MYCNP04198 464 aaPredicted RBP13.71□□□□□ -0.22
SPPL2A-204ENST00000558934 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.22
SPPL2A-204ENST00000558934 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
SPPL2A-204ENST00000558934 CCDC88BA6NC98 1476 aa13.65□□□□□ -0.22
SPPL2A-204ENST00000558934 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
SPPL2A-204ENST00000558934 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
SPPL2A-204ENST00000558934 NESP48681 1621 aa13.56□□□□□ -0.24
SPPL2A-204ENST00000558934 ZBTB22O15209 634 aa13.51□□□□□ -0.25
SPPL2A-204ENST00000558934 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
SPPL2A-204ENST00000558934 CFTRP13569 1480 aa13.5□□□□□ -0.25
SPPL2A-204ENST00000558934 LAMC3Q9Y6N6 1575 aa13.47□□□□□ -0.25
SPPL2A-204ENST00000558934 ABCB7O75027 752 aa13.41□□□□□ -0.26
SPPL2A-204ENST00000558934 PRDM2Q13029 1718 aa13.41□□□□□ -0.26
SPPL2A-204ENST00000558934 KIF21AQ7Z4S6 1674 aa13.39□□□□□ -0.27
SPPL2A-204ENST00000558934 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
SPPL2A-204ENST00000558934 PDS5BQ9NTI5 1447 aa13.34□□□□□ -0.27
SPPL2A-204ENST00000558934 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
SPPL2A-204ENST00000558934 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
SPPL2A-204ENST00000558934 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
SPPL2A-204ENST00000558934 THOC2Q8NI27 1593 aaKnown RBP13.28□□□□□ -0.28
SPPL2A-204ENST00000558934 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
SPPL2A-204ENST00000558934 POLA2Q14181 598 aa13.26□□□□□ -0.29
SPPL2A-204ENST00000558934 URB2Q14146 1524 aaKnown RBP13.26□□□□□ -0.29
SPPL2A-204ENST00000558934 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
SPPL2A-204ENST00000558934 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
SPPL2A-204ENST00000558934 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
SPPL2A-204ENST00000558934 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
SPPL2A-204ENST00000558934 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
SPPL2A-204ENST00000558934 WDR62O43379 1518 aa13.21□□□□□ -0.29
SPPL2A-204ENST00000558934 CUX1P39880 1505 aa13.21□□□□□ -0.29
SPPL2A-204ENST00000558934 SYNJ1O43426 1573 aa13.19□□□□□ -0.3
SPPL2A-204ENST00000558934 TOPBP1Q92547 1522 aa13.19□□□□□ -0.3
SPPL2A-204ENST00000558934 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms