RNA–Protein interactions for RNA: ENST00000558755.1

AC009562.1-202, humanhuman

TSL 4 BASIC

Gene AC009562.1, Length 565 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009562.1-202ENST00000558755 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
AC009562.1-202ENST00000558755 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
AC009562.1-202ENST00000558755 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
AC009562.1-202ENST00000558755 SENP3Q9H4L4 574 aaPredicted RBP13.48□□□□□ -0.25
AC009562.1-202ENST00000558755 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.36
AC009562.1-202ENST00000558755 FOXD1Q16676 465 aa12.58□□□□□ -0.4
AC009562.1-202ENST00000558755 PPP6R1Q9UPN7 881 aa12.29□□□□□ -0.44
AC009562.1-202ENST00000558755 ADRA2BP18089 450 aa12.25□□□□□ -0.45
AC009562.1-202ENST00000558755 PIAS4Q8N2W9 510 aaPredicted RBP11.84□□□□□ -0.51
AC009562.1-202ENST00000558755 NISCHQ9Y2I1 1504 aa11.45□□□□□ -0.58
AC009562.1-202ENST00000558755 MSH5O43196 834 aa11.43□□□□□ -0.58
AC009562.1-202ENST00000558755 PPP4R3CPQ6ZMV5 832 aa11.37□□□□□ -0.59
AC009562.1-202ENST00000558755 KCNA4P22459 653 aa11.32□□□□□ -0.6
AC009562.1-202ENST00000558755 MAPK8IP2Q13387 824 aaPredicted RBP11.1□□□□□ -0.63
AC009562.1-202ENST00000558755 SCAF1Q9H7N4 1312 aaKnown RBP11.08□□□□□ -0.64
AC009562.1-202ENST00000558755 NCBP3Q53F19 620 aaKnown RBP11.04□□□□□ -0.64
AC009562.1-202ENST00000558755 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
AC009562.1-202ENST00000558755 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
AC009562.1-202ENST00000558755 DMRT2Q9Y5R5 561 aa10.82□□□□□ -0.68
AC009562.1-202ENST00000558755 SLC4A1APQ9BWU0 796 aaKnown RBP10.75□□□□□ -0.69
AC009562.1-202ENST00000558755 RNF216Q9NWF9 866 aaPredicted RBP10.73□□□□□ -0.69
AC009562.1-202ENST00000558755 HOXD11P31277 338 aaPredicted RBP10.67□□□□□ -0.7
AC009562.1-202ENST00000558755 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
AC009562.1-202ENST00000558755 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
AC009562.1-202ENST00000558755 CSRNP3Q8WYN3 585 aa10.51□□□□□ -0.73
AC009562.1-202ENST00000558755 ZBTB22O15209 634 aa10.46□□□□□ -0.73
AC009562.1-202ENST00000558755 SLC4A2P04920 1241 aa10.36□□□□□ -0.75
AC009562.1-202ENST00000558755 DCAF8L1A6NGE4 600 aa10.31□□□□□ -0.76
AC009562.1-202ENST00000558755 FOXD4L1Q9NU39 408 aa10.3□□□□□ -0.76
AC009562.1-202ENST00000558755 POTEDQ86YR6 584 aa10.21□□□□□ -0.77
AC009562.1-202ENST00000558755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.13□□□□□ -0.79
AC009562.1-202ENST00000558755 CCDC180Q9P1Z9 1646 aa10.11□□□□□ -0.79
AC009562.1-202ENST00000558755 MYCNP04198 464 aaPredicted RBP10.07□□□□□ -0.8
AC009562.1-202ENST00000558755 U3KPZ7 1027 aaPredicted RBP10.03□□□□□ -0.8
AC009562.1-202ENST00000558755 ATXN8OSP0DMR3 200 aa9.91□□□□□ -0.82
AC009562.1-202ENST00000558755 ATF5Q9Y2D1 282 aaPredicted RBP9.91□□□□□ -0.82
AC009562.1-202ENST00000558755 RNF39Q9H2S5 420 aa9.87□□□□□ -0.83
AC009562.1-202ENST00000558755 SAMD1Q6SPF0 538 aaPredicted RBP9.85□□□□□ -0.83
AC009562.1-202ENST00000558755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.84□□□□□ -0.83
AC009562.1-202ENST00000558755 HNRNPUL2Q1KMD3 747 aaKnown RBP9.84□□□□□ -0.83
AC009562.1-202ENST00000558755 SPINK5Q9NQ38 1064 aaPredicted RBP9.73□□□□□ -0.85
AC009562.1-202ENST00000558755 C1QBPQ07021 282 aaKnown RBP9.72□□□□□ -0.85
AC009562.1-202ENST00000558755 APLP2Q06481 763 aa9.67□□□□□ -0.86
AC009562.1-202ENST00000558755 ZNF219Q9P2Y4 722 aaPredicted RBP9.66□□□□□ -0.86
AC009562.1-202ENST00000558755 CAPN15O75808 1086 aa9.62□□□□□ -0.87
AC009562.1-202ENST00000558755 TRHP20396 242 aaPredicted RBP9.62□□□□□ -0.87
AC009562.1-202ENST00000558755 ZCCHC6Q5VYS8 1495 aaKnown RBP9.6□□□□□ -0.87
AC009562.1-202ENST00000558755 ABCC9O60706 1549 aa9.55□□□□□ -0.88
AC009562.1-202ENST00000558755 POLA2Q14181 598 aa9.53□□□□□ -0.88
AC009562.1-202ENST00000558755 DCAF8L2P0C7V8 631 aa9.51□□□□□ -0.89
AC009562.1-202ENST00000558755 ABCB7O75027 752 aa9.49□□□□□ -0.89
AC009562.1-202ENST00000558755 DCAF1Q9Y4B6 1507 aa9.47□□□□□ -0.89
AC009562.1-202ENST00000558755 CACNB1Q02641 598 aaPredicted RBP9.47□□□□□ -0.89
AC009562.1-202ENST00000558755 MKRN4PQ13434 485 aaPredicted RBP9.47□□□□□ -0.89
AC009562.1-202ENST00000558755 DSG3P32926 999 aa9.46□□□□□ -0.9
AC009562.1-202ENST00000558755 FKBP8Q14318 412 aa9.43□□□□□ -0.9
AC009562.1-202ENST00000558755 NACADO15069 1562 aa9.38□□□□□ -0.91
AC009562.1-202ENST00000558755 MYO15BQ96JP2 1530 aa9.38□□□□□ -0.91
AC009562.1-202ENST00000558755 RB1CC1Q8TDY2 1594 aa9.34□□□□□ -0.91
AC009562.1-202ENST00000558755 FBLN2P98095 1184 aa9.33□□□□□ -0.92
AC009562.1-202ENST00000558755 SHROOM4Q9ULL8 1493 aa9.3□□□□□ -0.92
AC009562.1-202ENST00000558755 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.93
AC009562.1-202ENST00000558755 SPDYE4A6NLX3 237 aa9.26□□□□□ -0.93
AC009562.1-202ENST00000558755 SCRIBQ14160 1630 aa9.26□□□□□ -0.93
AC009562.1-202ENST00000558755 UNC13AQ9UPW8 1703 aa9.2□□□□□ -0.94
AC009562.1-202ENST00000558755 OSCARQ8IYS5 282 aa9.18□□□□□ -0.94
AC009562.1-202ENST00000558755 PROM2Q8N271 834 aa9.17□□□□□ -0.94
AC009562.1-202ENST00000558755 ZNF692Q9BU19 519 aaPredicted RBP9.1□□□□□ -0.95
AC009562.1-202ENST00000558755 SPDYE2BA6NHP3 402 aa9.09□□□□□ -0.95
AC009562.1-202ENST00000558755 SPDYE6P0CI01 402 aa9.09□□□□□ -0.95
AC009562.1-202ENST00000558755 SPDYE2Q495Y8 402 aa9.09□□□□□ -0.95
AC009562.1-202ENST00000558755 SSUH2Q9Y2M2 353 aa9.07□□□□□ -0.96
AC009562.1-202ENST00000558755 BICRAQ9NZM4 1560 aa9□□□□□ -0.97
AC009562.1-202ENST00000558755 PABPN1Q86U42 306 aaKnown RBP eCLIP9□□□□□ -0.97
AC009562.1-202ENST00000558755 FBXO3Q9UK99 471 aa8.98□□□□□ -0.97
AC009562.1-202ENST00000558755 SUPT5HO00267 1087 aaKnown RBP8.92□□□□□ -0.98
AC009562.1-202ENST00000558755 VASPP50552 380 aaPredicted RBP8.91□□□□□ -0.98
AC009562.1-202ENST00000558755 RBM42Q9BTD8 480 aaKnown RBP8.9□□□□□ -0.98
AC009562.1-202ENST00000558755 AKT1S1Q96B36 256 aa8.89□□□□□ -0.99
AC009562.1-202ENST00000558755 RTN4Q9NQC3 1192 aaKnown RBP8.89□□□□□ -0.99
AC009562.1-202ENST00000558755 BAZ1AQ9NRL2 1556 aaPredicted RBP8.89□□□□□ -0.99
AC009562.1-202ENST00000558755 CECR2Q9BXF3 1484 aa8.88□□□□□ -0.99
AC009562.1-202ENST00000558755 IFNLR1Q8IU57 520 aaPredicted RBP8.86□□□□□ -0.99
AC009562.1-202ENST00000558755 SMARCA4P51532 1647 aa8.86□□□□□ -0.99
AC009562.1-202ENST00000558755 REM2Q8IYK8 340 aaPredicted RBP8.84□□□□□ -0.99
AC009562.1-202ENST00000558755 STAG3Q9UJ98 1225 aa8.84□□□□□ -0.99
AC009562.1-202ENST00000558755 MROH2BQ7Z745 1585 aa8.83□□□□□ -1
AC009562.1-202ENST00000558755 RSF1Q96T23 1441 aaPredicted RBP8.83□□□□□ -1
AC009562.1-202ENST00000558755 AMER1Q5JTC6 1135 aaPredicted RBP8.82□□□□□ -1
AC009562.1-202ENST00000558755 WIZO95785 1651 aa8.81□□□□□ -1
AC009562.1-202ENST00000558755 MIER1Q8N108 512 aa8.77□□□□□ -1.01
AC009562.1-202ENST00000558755 SPDYE1Q8NFV5 336 aaPredicted RBP8.77□□□□□ -1.01
AC009562.1-202ENST00000558755 EIF4G1Q04637 1599 aaKnown RBP8.76□□□□□ -1.01
AC009562.1-202ENST00000558755 CLEC11AQ9Y240 323 aa8.75□□□□□ -1.01
AC009562.1-202ENST00000558755 PLCD3Q8N3E9 789 aa8.74□□□□□ -1.01
AC009562.1-202ENST00000558755 PITPNM1O00562 1244 aa8.73□□□□□ -1.01
AC009562.1-202ENST00000558755 SMARCA2P51531 1590 aa8.73□□□□□ -1.01
AC009562.1-202ENST00000558755 PEG3Q9GZU2 1588 aa8.72□□□□□ -1.01
AC009562.1-202ENST00000558755 TOP2AP11388 1531 aaKnown RBP8.7□□□□□ -1.02
AC009562.1-202ENST00000558755 KLHL34Q8N239 644 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms