RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-208ENST00000558602 AEBP2Q6ZN18 517 aaPredicted RBP14.95□□□□□ -0.02
IDH3A-208ENST00000558602 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
IDH3A-208ENST00000558602 CHIC1Q5VXU3 224 aa14.09□□□□□ -0.15
IDH3A-208ENST00000558602 SENP3Q9H4L4 574 aaPredicted RBP13.11□□□□□ -0.31
IDH3A-208ENST00000558602 PHF23Q9BUL5 403 aaPredicted RBP12.66□□□□□ -0.38
IDH3A-208ENST00000558602 FOXD1Q16676 465 aa12.31□□□□□ -0.44
IDH3A-208ENST00000558602 MSH5O43196 834 aa12.18□□□□□ -0.46
IDH3A-208ENST00000558602 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
IDH3A-208ENST00000558602 PIAS4Q8N2W9 510 aaPredicted RBP11.18□□□□□ -0.62
IDH3A-208ENST00000558602 NISCHQ9Y2I1 1504 aa10.98□□□□□ -0.65
IDH3A-208ENST00000558602 POTEHQ6S545 545 aa10.89□□□□□ -0.67
IDH3A-208ENST00000558602 PPP6R1Q9UPN7 881 aa10.34□□□□□ -0.75
IDH3A-208ENST00000558602 ADRA2BP18089 450 aa10.25□□□□□ -0.77
IDH3A-208ENST00000558602 RNF39Q9H2S5 420 aa10.2□□□□□ -0.78
IDH3A-208ENST00000558602 DMRT2Q9Y5R5 561 aa10.15□□□□□ -0.78
IDH3A-208ENST00000558602 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
IDH3A-208ENST00000558602 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
IDH3A-208ENST00000558602 DCAF8L1A6NGE4 600 aa9.76□□□□□ -0.85
IDH3A-208ENST00000558602 PLPPR3Q6T4P5 718 aa9.69□□□□□ -0.86
IDH3A-208ENST00000558602 PLSCR2Q9NRY7 297 aa9.57□□□□□ -0.88
IDH3A-208ENST00000558602 SP7Q8TDD2 431 aaPredicted RBP9.55□□□□□ -0.88
IDH3A-208ENST00000558602 SCAF1Q9H7N4 1312 aaKnown RBP9.54□□□□□ -0.88
IDH3A-208ENST00000558602 CCDC180Q9P1Z9 1646 aa9.5□□□□□ -0.89
IDH3A-208ENST00000558602 DNAJC5BQ9UF47 199 aa9.27□□□□□ -0.93
IDH3A-208ENST00000558602 ZCCHC6Q5VYS8 1495 aaKnown RBP9.23□□□□□ -0.93
IDH3A-208ENST00000558602 HOXD11P31277 338 aaPredicted RBP9.21□□□□□ -0.93
IDH3A-208ENST00000558602 DNAJC5Q9H3Z4 198 aa9.11□□□□□ -0.95
IDH3A-208ENST00000558602 DCAF8L2P0C7V8 631 aa9.09□□□□□ -0.95
IDH3A-208ENST00000558602 CHRDL2Q6WN34 429 aa9.07□□□□□ -0.96
IDH3A-208ENST00000558602 SHROOM4Q9ULL8 1493 aa9.06□□□□□ -0.96
IDH3A-208ENST00000558602 DSG3P32926 999 aa9.05□□□□□ -0.96
IDH3A-208ENST00000558602 DCAF1Q9Y4B6 1507 aa9.03□□□□□ -0.96
IDH3A-208ENST00000558602 ABCC9O60706 1549 aa9.02□□□□□ -0.97
IDH3A-208ENST00000558602 LHX8Q68G74 356 aa8.93□□□□□ -0.98
IDH3A-208ENST00000558602 MYO15BQ96JP2 1530 aa8.89□□□□□ -0.99
IDH3A-208ENST00000558602 NACADO15069 1562 aa8.83□□□□□ -1
IDH3A-208ENST00000558602 SCRIBQ14160 1630 aa8.8□□□□□ -1
IDH3A-208ENST00000558602 HAX1O00165 279 aa8.78□□□□□ -1
IDH3A-208ENST00000558602 RBM42Q9BTD8 480 aaKnown RBP8.78□□□□□ -1
IDH3A-208ENST00000558602 CAPN15O75808 1086 aa8.77□□□□□ -1.01
IDH3A-208ENST00000558602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.77□□□□□ -1.017e-8■■■■□ 25
IDH3A-208ENST00000558602 RNF216Q9NWF9 866 aaPredicted RBP8.77□□□□□ -1.01
IDH3A-208ENST00000558602 RB1CC1Q8TDY2 1594 aa8.75□□□□□ -1.01
IDH3A-208ENST00000558602 SUPT5HO00267 1087 aaKnown RBP8.74□□□□□ -1.01
IDH3A-208ENST00000558602 UNC13AQ9UPW8 1703 aa8.66□□□□□ -1.02
IDH3A-208ENST00000558602 SPINK5Q9NQ38 1064 aaPredicted RBP8.66□□□□□ -1.02
IDH3A-208ENST00000558602 CECR2Q9BXF3 1484 aa8.58□□□□□ -1.04
IDH3A-208ENST00000558602 RSF1Q96T23 1441 aaPredicted RBP8.56□□□□□ -1.04
IDH3A-208ENST00000558602 BICRAQ9NZM4 1560 aa8.55□□□□□ -1.04
IDH3A-208ENST00000558602 PCDH10Q9P2E7 1040 aa8.53□□□□□ -1.04
IDH3A-208ENST00000558602 PABPN1Q86U42 306 aaKnown RBP eCLIP8.53□□□□□ -1.04
IDH3A-208ENST00000558602 PIP4P2Q8N4L2 257 aa8.53□□□□□ -1.04
IDH3A-208ENST00000558602 MROH2BQ7Z745 1585 aa8.52□□□□□ -1.05
IDH3A-208ENST00000558602 CNKSR2Q8WXI2 1034 aa8.48□□□□□ -1.05
IDH3A-208ENST00000558602 POTEMA6NI47 508 aa8.48□□□□□ -1.05
IDH3A-208ENST00000558602 EVX2Q03828 476 aa8.47□□□□□ -1.05
IDH3A-208ENST00000558602 WIZO95785 1651 aa8.46□□□□□ -1.05
IDH3A-208ENST00000558602 BAZ1AQ9NRL2 1556 aaPredicted RBP8.44□□□□□ -1.06
IDH3A-208ENST00000558602 EHMT2Q96KQ7 1210 aa8.43□□□□□ -1.06
IDH3A-208ENST00000558602 SMARCA4P51532 1647 aa8.43□□□□□ -1.06
IDH3A-208ENST00000558602 ABCB7O75027 752 aa8.39□□□□□ -1.07
IDH3A-208ENST00000558602 POTEGQ6S5H5 508 aa8.39□□□□□ -1.07
IDH3A-208ENST00000558602 U3KPZ7 1027 aaPredicted RBP8.39□□□□□ -1.07
IDH3A-208ENST00000558602 TOP2AP11388 1531 aaKnown RBP8.31□□□□□ -1.08
IDH3A-208ENST00000558602 PEG3Q9GZU2 1588 aa8.3□□□□□ -1.08
IDH3A-208ENST00000558602 CUX2O14529 1486 aa8.28□□□□□ -1.08
IDH3A-208ENST00000558602 GABBR2O75899 941 aa8.28□□□□□ -1.08
IDH3A-208ENST00000558602 ZNF219Q9P2Y4 722 aaPredicted RBP8.27□□□□□ -1.08
IDH3A-208ENST00000558602 ATAD2BQ9ULI0 1458 aa8.27□□□□□ -1.09
IDH3A-208ENST00000558602 SMARCA2P51531 1590 aa8.27□□□□□ -1.09
IDH3A-208ENST00000558602 TRHP20396 242 aaPredicted RBP8.27□□□□□ -1.09
IDH3A-208ENST00000558602 FXR2P51116 673 aaKnown RBP eCLIP8.27□□□□□ -1.09
IDH3A-208ENST00000558602 CCDC88BA6NC98 1476 aa8.27□□□□□ -1.09
IDH3A-208ENST00000558602 PPP4R3CPQ6ZMV5 832 aa8.26□□□□□ -1.09
IDH3A-208ENST00000558602 EIF4G1Q04637 1599 aaKnown RBP8.26□□□□□ -1.09
IDH3A-208ENST00000558602 AKT1S1Q96B36 256 aa8.23□□□□□ -1.09
IDH3A-208ENST00000558602 TRIM41Q8WV44 630 aa8.23□□□□□ -1.09
IDH3A-208ENST00000558602 SLC24A1O60721 1099 aa8.22□□□□□ -1.09
IDH3A-208ENST00000558602 BAZ1BQ9UIG0 1483 aaKnown RBP8.21□□□□□ -1.09
IDH3A-208ENST00000558602 NCAPD3P42695 1498 aa8.18□□□□□ -1.1
IDH3A-208ENST00000558602 APLP2Q06481 763 aa8.17□□□□□ -1.1
IDH3A-208ENST00000558602 CC2D2AQ9P2K1 1620 aa8.16□□□□□ -1.1
IDH3A-208ENST00000558602 HMGXB3Q12766 1538 aa8.15□□□□□ -1.1
IDH3A-208ENST00000558602 ABCC8Q09428 1581 aa8.15□□□□□ -1.11
IDH3A-208ENST00000558602 LOC105371045A0A1W2PR82 267 aa8.12□□□□□ -1.11
IDH3A-208ENST00000558602 REM2Q8IYK8 340 aaPredicted RBP8.11□□□□□ -1.11
IDH3A-208ENST00000558602 FAM9AQ8IZU1 332 aaPredicted RBP8.08□□□□□ -1.12
IDH3A-208ENST00000558602 C19orf67A6NJJ6 358 aa8.07□□□□□ -1.12
IDH3A-208ENST00000558602 POTEIP0CG38 1075 aa8.05□□□□□ -1.12
IDH3A-208ENST00000558602 OTUD5Q96G74 571 aa8.03□□□□□ -1.12
IDH3A-208ENST00000558602 WRNQ14191 1432 aaPredicted RBP eCLIP8.03□□□□□ -1.12
IDH3A-208ENST00000558602 SYNJ1O43426 1573 aa8.03□□□□□ -1.12
IDH3A-208ENST00000558602 PITPNM1O00562 1244 aa8.02□□□□□ -1.13
IDH3A-208ENST00000558602 CFTRP13569 1480 aa8.02□□□□□ -1.13
IDH3A-208ENST00000558602 KCNA4P22459 653 aa8.02□□□□□ -1.13
IDH3A-208ENST00000558602 SOGA1O94964 1423 aa8□□□□□ -1.13
IDH3A-208ENST00000558602 RUSC2Q8N2Y8 1516 aa8□□□□□ -1.13
IDH3A-208ENST00000558602 CADPSQ9ULU8 1353 aa7.98□□□□□ -1.13
IDH3A-208ENST00000558602 PRDM2Q13029 1718 aa7.97□□□□□ -1.13
IDH3A-208ENST00000558602 TOP2BQ02880 1626 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms