RNA–Protein interactions for RNA: ENST00000557789.5

SNX22-202, Transcript of sorting nexin 22, humanhuman

TSL 5

Gene SNX22, Length 3,713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-202ENST00000557789 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
SNX22-202ENST00000557789 SHROOM4Q9ULL8 1493 aa22.57■■□□□ 1.2
SNX22-202ENST00000557789 SUPT5HO00267 1087 aaKnown RBP22.49■■□□□ 1.19
SNX22-202ENST00000557789 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
SNX22-202ENST00000557789 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
SNX22-202ENST00000557789 HRCP23327 699 aa21.58■■□□□ 1.05
SNX22-202ENST00000557789 PPARGC1BQ86YN6 1023 aaKnown RBP21.51■■□□□ 1.03
SNX22-202ENST00000557789 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
SNX22-202ENST00000557789 LOC105371045A0A1W2PR82 267 aa21.27■□□□□ 0.99
SNX22-202ENST00000557789 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
SNX22-202ENST00000557789 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
SNX22-202ENST00000557789 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
SNX22-202ENST00000557789 ZCCHC6Q5VYS8 1495 aaKnown RBP20.87■□□□□ 0.93
SNX22-202ENST00000557789 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
SNX22-202ENST00000557789 TRIM41Q8WV44 630 aa20.65■□□□□ 0.9
SNX22-202ENST00000557789 TTBK1Q5TCY1 1321 aaPredicted RBP20.52■□□□□ 0.88
SNX22-202ENST00000557789 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
SNX22-202ENST00000557789 ZEB1P37275 1124 aaPredicted RBP20.5■□□□□ 0.87
SNX22-202ENST00000557789 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
SNX22-202ENST00000557789 CCER1Q8TC90 406 aaPredicted RBP20.32■□□□□ 0.84
SNX22-202ENST00000557789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
SNX22-202ENST00000557789 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
SNX22-202ENST00000557789 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.83
SNX22-202ENST00000557789 YTHDC1Q96MU7 727 aaKnown RBP20.04■□□□□ 0.8
SNX22-202ENST00000557789 NEUROD1Q13562 356 aa19.98■□□□□ 0.79
SNX22-202ENST00000557789 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
SNX22-202ENST00000557789 DIEXFQ68CQ4 756 aaKnown RBP19.97■□□□□ 0.79
SNX22-202ENST00000557789 GTF3C3Q9Y5Q9 886 aa19.97■□□□□ 0.79
SNX22-202ENST00000557789 ACIN1Q9UKV3 1341 aaKnown RBP19.94■□□□□ 0.78
SNX22-202ENST00000557789 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
SNX22-202ENST00000557789 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
SNX22-202ENST00000557789 UBTFP17480 764 aaKnown RBP19.82■□□□□ 0.76
SNX22-202ENST00000557789 RANGAP1P46060 587 aaPredicted RBP19.81■□□□□ 0.76
SNX22-202ENST00000557789 ABCC9O60706 1549 aa19.81■□□□□ 0.76
SNX22-202ENST00000557789 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
SNX22-202ENST00000557789 RB1CC1Q8TDY2 1594 aa19.68■□□□□ 0.74
SNX22-202ENST00000557789 CECR2Q9BXF3 1484 aa19.55■□□□□ 0.72
SNX22-202ENST00000557789 ZNF316A6NFI3 1004 aaPredicted RBP19.54■□□□□ 0.72
SNX22-202ENST00000557789 APLP2Q06481 763 aa19.53■□□□□ 0.72
SNX22-202ENST00000557789 MIER1Q8N108 512 aa19.45■□□□□ 0.7
SNX22-202ENST00000557789 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
SNX22-202ENST00000557789 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
SNX22-202ENST00000557789 MYT1Q01538 1121 aa19.32■□□□□ 0.68
SNX22-202ENST00000557789 CEP162Q5TB80 1403 aa19.31■□□□□ 0.68
SNX22-202ENST00000557789 SOGA1O94964 1423 aa19.25■□□□□ 0.67
SNX22-202ENST00000557789 ITGAEP38570 1179 aa19.24■□□□□ 0.67
SNX22-202ENST00000557789 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
SNX22-202ENST00000557789 WIZO95785 1651 aa19.22■□□□□ 0.67
SNX22-202ENST00000557789 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
SNX22-202ENST00000557789 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
SNX22-202ENST00000557789 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
SNX22-202ENST00000557789 TNIKQ9UKE5 1360 aa19.09■□□□□ 0.65
SNX22-202ENST00000557789 BCANQ96GW7 911 aa19.08■□□□□ 0.65
SNX22-202ENST00000557789 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.65
SNX22-202ENST00000557789 WRNQ14191 1432 aaPredicted RBP eCLIP18.97■□□□□ 0.63
SNX22-202ENST00000557789 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
SNX22-202ENST00000557789 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
SNX22-202ENST00000557789 CLIP1P30622 1438 aa18.94■□□□□ 0.62
SNX22-202ENST00000557789 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
SNX22-202ENST00000557789 NACADO15069 1562 aa18.91■□□□□ 0.62
SNX22-202ENST00000557789 SUPT16HQ9Y5B9 1047 aaKnown RBP18.89■□□□□ 0.62
SNX22-202ENST00000557789 EEA1Q15075 1411 aa18.81■□□□□ 0.6
SNX22-202ENST00000557789 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
SNX22-202ENST00000557789 HIRIP3Q9BW71 556 aaPredicted RBP18.79■□□□□ 0.6
SNX22-202ENST00000557789 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.59
SNX22-202ENST00000557789 KANK4Q5T7N3 995 aaPredicted RBP18.77■□□□□ 0.59
SNX22-202ENST00000557789 FKBP8Q14318 412 aa18.76■□□□□ 0.59
SNX22-202ENST00000557789 NEFLP07196 543 aa18.76■□□□□ 0.59
SNX22-202ENST00000557789 SMARCA2P51531 1590 aa18.74■□□□□ 0.59
SNX22-202ENST00000557789 TOP2AP11388 1531 aaKnown RBP18.72■□□□□ 0.59
SNX22-202ENST00000557789 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
SNX22-202ENST00000557789 CEP164Q9UPV0 1460 aa18.72■□□□□ 0.59
SNX22-202ENST00000557789 VPS8Q8N3P4 1428 aa18.7■□□□□ 0.58
SNX22-202ENST00000557789 TRIM52Q96A61 297 aa18.69■□□□□ 0.58
SNX22-202ENST00000557789 TSHZ2Q9NRE2 1034 aa18.68■□□□□ 0.58
SNX22-202ENST00000557789 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
SNX22-202ENST00000557789 P3H3Q8IVL6 736 aa18.64■□□□□ 0.58
SNX22-202ENST00000557789 SMARCA4P51532 1647 aa18.62■□□□□ 0.57
SNX22-202ENST00000557789 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
SNX22-202ENST00000557789 SIN3AQ96ST3 1273 aa18.61■□□□□ 0.57
SNX22-202ENST00000557789 UNC13AQ9UPW8 1703 aa18.59■□□□□ 0.57
SNX22-202ENST00000557789 ANP32EQ9BTT0 268 aa18.58■□□□□ 0.57
SNX22-202ENST00000557789 CLSPNQ9HAW4 1339 aa18.57■□□□□ 0.56
SNX22-202ENST00000557789 ERICH6Q7L0X2 663 aa18.52■□□□□ 0.56
SNX22-202ENST00000557789 ANP32CO43423 234 aa18.51■□□□□ 0.55
SNX22-202ENST00000557789 IRX6P78412 446 aaPredicted RBP18.51■□□□□ 0.55
SNX22-202ENST00000557789 CNGB1Q14028 1251 aaPredicted RBP18.51■□□□□ 0.55
SNX22-202ENST00000557789 SYNJ1O43426 1573 aa18.45■□□□□ 0.54
SNX22-202ENST00000557789 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
SNX22-202ENST00000557789 KIF21BO75037 1637 aa18.43■□□□□ 0.54
SNX22-202ENST00000557789 RAB3GAP2Q9H2M9 1393 aa18.39■□□□□ 0.53
SNX22-202ENST00000557789 RBM19Q9Y4C8 960 aaKnown RBP18.38■□□□□ 0.53
SNX22-202ENST00000557789 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
SNX22-202ENST00000557789 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNX22-202ENST00000557789 BCL11AQ9H165 835 aa18.34■□□□□ 0.53
SNX22-202ENST00000557789 CDK11AQ9UQ88 783 aaPredicted RBP18.28■□□□□ 0.52
SNX22-202ENST00000557789 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
SNX22-202ENST00000557789 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
SNX22-202ENST00000557789 TONSLQ96HA7 1378 aa18.26■□□□□ 0.51
SNX22-202ENST00000557789 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms