RNA–Protein interactions for RNA: ENST00000556551.2

AC005520.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC005520.1, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005520.1-201ENST00000556551 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
AC005520.1-201ENST00000556551 SHROOM4Q9ULL8 1493 aa15.35■□□□□ 0.05
AC005520.1-201ENST00000556551 SUPT5HO00267 1087 aaKnown RBP15.16■□□□□ 0.02
AC005520.1-201ENST00000556551 DCAF8L2P0C7V8 631 aa14.8□□□□□ -0.04
AC005520.1-201ENST00000556551 MYO15BQ96JP2 1530 aa14.65□□□□□ -0.06
AC005520.1-201ENST00000556551 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
AC005520.1-201ENST00000556551 PCGF6Q9BYE7 350 aa14.61□□□□□ -0.07
AC005520.1-201ENST00000556551 HRCP23327 699 aa14.55□□□□□ -0.08
AC005520.1-201ENST00000556551 PPARGC1BQ86YN6 1023 aaKnown RBP14.53□□□□□ -0.08
AC005520.1-201ENST00000556551 ZCCHC6Q5VYS8 1495 aaKnown RBP14.52□□□□□ -0.09
AC005520.1-201ENST00000556551 LOC105371045A0A1W2PR82 267 aa14.43□□□□□ -0.1
AC005520.1-201ENST00000556551 CCDC180Q9P1Z9 1646 aa14.2□□□□□ -0.14
AC005520.1-201ENST00000556551 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
AC005520.1-201ENST00000556551 FAM9AQ8IZU1 332 aaPredicted RBP14.09□□□□□ -0.15
AC005520.1-201ENST00000556551 TRIM26Q12899 539 aaPredicted RBP14.02□□□□□ -0.16
AC005520.1-201ENST00000556551 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
AC005520.1-201ENST00000556551 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
AC005520.1-201ENST00000556551 RSF1Q96T23 1441 aaPredicted RBP13.79□□□□□ -0.2
AC005520.1-201ENST00000556551 SCRIBQ14160 1630 aa13.78□□□□□ -0.2
AC005520.1-201ENST00000556551 TTBK1Q5TCY1 1321 aaPredicted RBP13.73□□□□□ -0.21
AC005520.1-201ENST00000556551 ABCC9O60706 1549 aa13.72□□□□□ -0.21
AC005520.1-201ENST00000556551 RB1CC1Q8TDY2 1594 aa13.7□□□□□ -0.22
AC005520.1-201ENST00000556551 SCAF1Q9H7N4 1312 aaKnown RBP13.68□□□□□ -0.22
AC005520.1-201ENST00000556551 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
AC005520.1-201ENST00000556551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.67□□□□□ -0.22
AC005520.1-201ENST00000556551 CECR2Q9BXF3 1484 aa13.59□□□□□ -0.23
AC005520.1-201ENST00000556551 CCER1Q8TC90 406 aaPredicted RBP13.55□□□□□ -0.24
AC005520.1-201ENST00000556551 MROH2BQ7Z745 1585 aa13.48□□□□□ -0.25
AC005520.1-201ENST00000556551 NEUROD1Q13562 356 aa13.45□□□□□ -0.26
AC005520.1-201ENST00000556551 WIZO95785 1651 aa13.41□□□□□ -0.26
AC005520.1-201ENST00000556551 DIEXFQ68CQ4 756 aaKnown RBP13.37□□□□□ -0.27
AC005520.1-201ENST00000556551 ACIN1Q9UKV3 1341 aaKnown RBP13.36□□□□□ -0.27
AC005520.1-201ENST00000556551 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
AC005520.1-201ENST00000556551 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
AC005520.1-201ENST00000556551 ABCC8Q09428 1581 aa13.31□□□□□ -0.28
AC005520.1-201ENST00000556551 YTHDC1Q96MU7 727 aaKnown RBP13.31□□□□□ -0.28
AC005520.1-201ENST00000556551 UBTFP17480 764 aaKnown RBP13.3□□□□□ -0.28
AC005520.1-201ENST00000556551 CCDC88BA6NC98 1476 aa13.29□□□□□ -0.28
AC005520.1-201ENST00000556551 SOGA1O94964 1423 aa13.26□□□□□ -0.29
AC005520.1-201ENST00000556551 RANGAP1P46060 587 aaPredicted RBP13.26□□□□□ -0.29
AC005520.1-201ENST00000556551 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
AC005520.1-201ENST00000556551 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
AC005520.1-201ENST00000556551 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
AC005520.1-201ENST00000556551 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
AC005520.1-201ENST00000556551 NACADO15069 1562 aa13.19□□□□□ -0.3
AC005520.1-201ENST00000556551 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
AC005520.1-201ENST00000556551 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
AC005520.1-201ENST00000556551 BAZ1AQ9NRL2 1556 aaPredicted RBP13.16□□□□□ -0.3
AC005520.1-201ENST00000556551 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
AC005520.1-201ENST00000556551 EIF4G1Q04637 1599 aaKnown RBP13.12□□□□□ -0.31
AC005520.1-201ENST00000556551 MIER1Q8N108 512 aa13.11□□□□□ -0.31
AC005520.1-201ENST00000556551 TNIKQ9UKE5 1360 aa13.08□□□□□ -0.31
AC005520.1-201ENST00000556551 WRNQ14191 1432 aaPredicted RBP eCLIP13.08□□□□□ -0.32
AC005520.1-201ENST00000556551 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
AC005520.1-201ENST00000556551 TOP2AP11388 1531 aaKnown RBP13.04□□□□□ -0.32
AC005520.1-201ENST00000556551 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
AC005520.1-201ENST00000556551 APLP2Q06481 763 aa12.97□□□□□ -0.33
AC005520.1-201ENST00000556551 GOLGA3Q08378 1498 aa12.96□□□□□ -0.33
AC005520.1-201ENST00000556551 CLIP1P30622 1438 aa12.93□□□□□ -0.34
AC005520.1-201ENST00000556551 EEA1Q15075 1411 aa12.89□□□□□ -0.35
AC005520.1-201ENST00000556551 ITGAEP38570 1179 aa12.87□□□□□ -0.35
AC005520.1-201ENST00000556551 RAPGEF2Q9Y4G8 1499 aa12.87□□□□□ -0.35
AC005520.1-201ENST00000556551 SYNJ1O43426 1573 aa12.85□□□□□ -0.35
AC005520.1-201ENST00000556551 CEP164Q9UPV0 1460 aa12.84□□□□□ -0.35
AC005520.1-201ENST00000556551 KANK4Q5T7N3 995 aaPredicted RBP12.84□□□□□ -0.35
AC005520.1-201ENST00000556551 VPS8Q8N3P4 1428 aa12.82□□□□□ -0.36
AC005520.1-201ENST00000556551 UNC13AQ9UPW8 1703 aa12.81□□□□□ -0.36
AC005520.1-201ENST00000556551 KCNH8Q96L42 1107 aa12.76□□□□□ -0.37
AC005520.1-201ENST00000556551 KIF21BO75037 1637 aa12.75□□□□□ -0.37
AC005520.1-201ENST00000556551 DHX57Q6P158 1386 aaKnown RBP12.74□□□□□ -0.37
AC005520.1-201ENST00000556551 SUPT16HQ9Y5B9 1047 aaKnown RBP12.72□□□□□ -0.37
AC005520.1-201ENST00000556551 BICRAQ9NZM4 1560 aa12.71□□□□□ -0.38
AC005520.1-201ENST00000556551 BCANQ96GW7 911 aa12.69□□□□□ -0.38
AC005520.1-201ENST00000556551 BAZ1BQ9UIG0 1483 aaKnown RBP12.69□□□□□ -0.38
AC005520.1-201ENST00000556551 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
AC005520.1-201ENST00000556551 HIRIP3Q9BW71 556 aaPredicted RBP12.66□□□□□ -0.38
AC005520.1-201ENST00000556551 ARAP1Q96P48 1450 aa12.64□□□□□ -0.39
AC005520.1-201ENST00000556551 ATP1B4Q9UN42 357 aaPredicted RBP12.63□□□□□ -0.39
AC005520.1-201ENST00000556551 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
AC005520.1-201ENST00000556551 SIN3AQ96ST3 1273 aa12.61□□□□□ -0.39
AC005520.1-201ENST00000556551 MYT1Q01538 1121 aa12.6□□□□□ -0.39
AC005520.1-201ENST00000556551 DDX10Q13206 875 aaKnown RBP12.6□□□□□ -0.39
AC005520.1-201ENST00000556551 FAM50AQ14320 339 aaKnown RBP12.57□□□□□ -0.4
AC005520.1-201ENST00000556551 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
AC005520.1-201ENST00000556551 PEG3Q9GZU2 1588 aa12.57□□□□□ -0.4
AC005520.1-201ENST00000556551 CCNB3Q8WWL7 1395 aa12.56□□□□□ -0.4
AC005520.1-201ENST00000556551 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
AC005520.1-201ENST00000556551 CLSPNQ9HAW4 1339 aa12.55□□□□□ -0.4
AC005520.1-201ENST00000556551 RAB3GAP2Q9H2M9 1393 aa12.54□□□□□ -0.4
AC005520.1-201ENST00000556551 TOP2BQ02880 1626 aa12.54□□□□□ -0.4
AC005520.1-201ENST00000556551 FKBP8Q14318 412 aa12.52□□□□□ -0.41
AC005520.1-201ENST00000556551 TRIM52Q96A61 297 aa12.52□□□□□ -0.41
AC005520.1-201ENST00000556551 RRBP1Q9P2E9 1410 aaKnown RBP12.51□□□□□ -0.41
AC005520.1-201ENST00000556551 ARHGAP35Q9NRY4 1499 aa12.5□□□□□ -0.41
AC005520.1-201ENST00000556551 CUX1P39880 1505 aa12.5□□□□□ -0.41
AC005520.1-201ENST00000556551 KIF27Q86VH2 1401 aa12.49□□□□□ -0.41
AC005520.1-201ENST00000556551 ERICH3Q5RHP9 1530 aa12.45□□□□□ -0.42
AC005520.1-201ENST00000556551 PHLDB1Q86UU1 1377 aa12.44□□□□□ -0.42
AC005520.1-201ENST00000556551 MAPKBP1O60336 1514 aa12.43□□□□□ -0.42
AC005520.1-201ENST00000556551 CUX2O14529 1486 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms