RNA–Protein interactions for RNA: ENST00000556441.1

CLMN-206, Transcript of calmin, humanhuman

TSL 5 BASIC

Gene CLMN, Length 452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-206ENST00000556441 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
CLMN-206ENST00000556441 CHIC1Q5VXU3 224 aa15.7■□□□□ 0.1
CLMN-206ENST00000556441 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
CLMN-206ENST00000556441 PHF23Q9BUL5 403 aaPredicted RBP14.22□□□□□ -0.13
CLMN-206ENST00000556441 FOXD1Q16676 465 aa13.6□□□□□ -0.23
CLMN-206ENST00000556441 POTEDQ86YR6 584 aa13.23□□□□□ -0.29
CLMN-206ENST00000556441 MSH5O43196 834 aa12.73□□□□□ -0.37
CLMN-206ENST00000556441 DNAJC5BQ9UF47 199 aa12.7□□□□□ -0.38
CLMN-206ENST00000556441 ABCC9O60706 1549 aa12.69□□□□□ -0.38
CLMN-206ENST00000556441 NISCHQ9Y2I1 1504 aa12.65□□□□□ -0.38
CLMN-206ENST00000556441 PIAS4Q8N2W9 510 aaPredicted RBP12.51□□□□□ -0.41
CLMN-206ENST00000556441 PPP6R1Q9UPN7 881 aa12.47□□□□□ -0.41
CLMN-206ENST00000556441 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
CLMN-206ENST00000556441 ADRA2BP18089 450 aa12.34□□□□□ -0.43
CLMN-206ENST00000556441 PLPPR3Q6T4P5 718 aa12.26□□□□□ -0.45
CLMN-206ENST00000556441 CCDC180Q9P1Z9 1646 aa11.75□□□□□ -0.53
CLMN-206ENST00000556441 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
CLMN-206ENST00000556441 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLMN-206ENST00000556441 CECR2Q9BXF3 1484 aa11.54□□□□□ -0.56
CLMN-206ENST00000556441 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
CLMN-206ENST00000556441 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
CLMN-206ENST00000556441 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
CLMN-206ENST00000556441 CC2D2AQ9P2K1 1620 aa11.4□□□□□ -0.58
CLMN-206ENST00000556441 NACADO15069 1562 aa11.36□□□□□ -0.59
CLMN-206ENST00000556441 CUX2O14529 1486 aa11.33□□□□□ -0.6
CLMN-206ENST00000556441 BICRAQ9NZM4 1560 aa11.32□□□□□ -0.6
CLMN-206ENST00000556441 UNC13AQ9UPW8 1703 aa11.32□□□□□ -0.6
CLMN-206ENST00000556441 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
CLMN-206ENST00000556441 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
CLMN-206ENST00000556441 EIF4G1Q04637 1599 aaKnown RBP11.15□□□□□ -0.62
CLMN-206ENST00000556441 SHROOM4Q9ULL8 1493 aa11.12□□□□□ -0.63
CLMN-206ENST00000556441 SCAF1Q9H7N4 1312 aaKnown RBP11.07□□□□□ -0.64
CLMN-206ENST00000556441 ERCC6Q03468 1493 aa11.06□□□□□ -0.64
CLMN-206ENST00000556441 RNF39Q9H2S5 420 aa10.94□□□□□ -0.66
CLMN-206ENST00000556441 MYO15BQ96JP2 1530 aa10.88□□□□□ -0.67
CLMN-206ENST00000556441 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
CLMN-206ENST00000556441 DCAF8L1A6NGE4 600 aa10.83□□□□□ -0.68
CLMN-206ENST00000556441 ILDR1Q86SU0 546 aaPredicted RBP10.79□□□□□ -0.68
CLMN-206ENST00000556441 PPP4R3CPQ6ZMV5 832 aa10.74□□□□□ -0.69
CLMN-206ENST00000556441 SCRIBQ14160 1630 aa10.72□□□□□ -0.69
CLMN-206ENST00000556441 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
CLMN-206ENST00000556441 THOC2Q8NI27 1593 aaKnown RBP10.69□□□□□ -0.7
CLMN-206ENST00000556441 OSCARQ8IYS5 282 aa10.68□□□□□ -0.7
CLMN-206ENST00000556441 C1QBPQ07021 282 aaKnown RBP10.66□□□□□ -0.7
CLMN-206ENST00000556441 BAZ1AQ9NRL2 1556 aaPredicted RBP10.62□□□□□ -0.71
CLMN-206ENST00000556441 RNF216Q9NWF9 866 aaPredicted RBP10.62□□□□□ -0.71
CLMN-206ENST00000556441 NESP48681 1621 aa10.62□□□□□ -0.71
CLMN-206ENST00000556441 CNKSR2Q8WXI2 1034 aa10.6□□□□□ -0.71
CLMN-206ENST00000556441 RIMBP3CA6NJZ7 1639 aa10.59□□□□□ -0.71
CLMN-206ENST00000556441 RIMBP3BA6NNM3 1639 aa10.59□□□□□ -0.71
CLMN-206ENST00000556441 RIMBP3Q9UFD9 1639 aa10.59□□□□□ -0.71
CLMN-206ENST00000556441 SMARCA2P51531 1590 aa10.56□□□□□ -0.72
CLMN-206ENST00000556441 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
CLMN-206ENST00000556441 CYB5RLQ6IPT4 315 aa10.49□□□□□ -0.73
CLMN-206ENST00000556441 ARHGEF11O15085 1522 aa10.48□□□□□ -0.73
CLMN-206ENST00000556441 KIF21AQ7Z4S6 1674 aa10.42□□□□□ -0.74
CLMN-206ENST00000556441 PDS5BQ9NTI5 1447 aa10.41□□□□□ -0.74
CLMN-206ENST00000556441 LAMC3Q9Y6N6 1575 aa10.41□□□□□ -0.74
CLMN-206ENST00000556441 DCAF1Q9Y4B6 1507 aa10.39□□□□□ -0.75
CLMN-206ENST00000556441 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
CLMN-206ENST00000556441 WDR62O43379 1518 aa10.35□□□□□ -0.75
CLMN-206ENST00000556441 HMGXB3Q12766 1538 aa10.33□□□□□ -0.76
CLMN-206ENST00000556441 ATAD2BQ9ULI0 1458 aa10.32□□□□□ -0.76
CLMN-206ENST00000556441 ARAP1Q96P48 1450 aa10.3□□□□□ -0.76
CLMN-206ENST00000556441 ZCCHC6Q5VYS8 1495 aaKnown RBP10.28□□□□□ -0.76
CLMN-206ENST00000556441 POTEHQ6S545 545 aa10.24□□□□□ -0.77
CLMN-206ENST00000556441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.77
CLMN-206ENST00000556441 LMTK3Q96Q04 1460 aa10.2□□□□□ -0.78
CLMN-206ENST00000556441 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
CLMN-206ENST00000556441 SOCS7O14512 581 aa10.16□□□□□ -0.78
CLMN-206ENST00000556441 FBXO41Q8TF61 875 aa10.16□□□□□ -0.78
CLMN-206ENST00000556441 CADPSQ9ULU8 1353 aa10.14□□□□□ -0.79
CLMN-206ENST00000556441 RSF1Q96T23 1441 aaPredicted RBP10.14□□□□□ -0.79
CLMN-206ENST00000556441 CEP164Q9UPV0 1460 aa10.13□□□□□ -0.79
CLMN-206ENST00000556441 KDM4FA0A1W2PPD8 638 aa10.12□□□□□ -0.79
CLMN-206ENST00000556441 NPM3O75607 178 aaKnown RBP10.11□□□□□ -0.79
CLMN-206ENST00000556441 U3KPZ7 1027 aaPredicted RBP10.11□□□□□ -0.79
CLMN-206ENST00000556441 ERCC6L2Q5T890 1561 aa10.1□□□□□ -0.79
CLMN-206ENST00000556441 DSG3P32926 999 aa10.1□□□□□ -0.79
CLMN-206ENST00000556441 SPINK5Q9NQ38 1064 aaPredicted RBP10.08□□□□□ -0.8
CLMN-206ENST00000556441 NCBP3Q53F19 620 aaKnown RBP10.07□□□□□ -0.8
CLMN-206ENST00000556441 SMARCA4P51532 1647 aa10.07□□□□□ -0.8
CLMN-206ENST00000556441 FANCD2Q9BXW9 1451 aa10.03□□□□□ -0.8
CLMN-206ENST00000556441 ILDR2Q71H61 639 aa10.02□□□□□ -0.81
CLMN-206ENST00000556441 ZNF608Q9ULD9 1512 aaPredicted RBP10.02□□□□□ -0.81
CLMN-206ENST00000556441 HECW2Q9P2P5 1572 aa10□□□□□ -0.81
CLMN-206ENST00000556441 CHD1O14646 1710 aa9.99□□□□□ -0.81
CLMN-206ENST00000556441 FBLN2P98095 1184 aa9.99□□□□□ -0.81
CLMN-206ENST00000556441 URB2Q14146 1524 aaKnown RBP9.98□□□□□ -0.81
CLMN-206ENST00000556441 PEG3Q9GZU2 1588 aa9.97□□□□□ -0.81
CLMN-206ENST00000556441 IFT140Q96RY7 1462 aa9.96□□□□□ -0.82
CLMN-206ENST00000556441 DISP3Q9P2K9 1392 aa9.95□□□□□ -0.82
CLMN-206ENST00000556441 CAPN15O75808 1086 aa9.94□□□□□ -0.82
CLMN-206ENST00000556441 EIF4G3O43432 1585 aaKnown RBP9.92□□□□□ -0.82
CLMN-206ENST00000556441 SYNJ2O15056 1496 aa9.88□□□□□ -0.83
CLMN-206ENST00000556441 GAPVD1Q14C86 1478 aa9.88□□□□□ -0.83
CLMN-206ENST00000556441 CLASP1Q7Z460 1538 aa9.87□□□□□ -0.83
CLMN-206ENST00000556441 ADGRL1O94910 1474 aa9.84□□□□□ -0.83
CLMN-206ENST00000556441 KIF13AQ9H1H9 1805 aa9.84□□□□□ -0.83
CLMN-206ENST00000556441 KDM6BO15054 1643 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms