RNA–Protein interactions for RNA: ENST00000555944.5

NSFL1C-213, Transcript of NSFL1 cofactor, humanhuman

TSL 2

Gene NSFL1C, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-213ENST00000555944 NISCHQ9Y2I1 1504 aa38.26■■■■□ 3.71
NSFL1C-213ENST00000555944 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
NSFL1C-213ENST00000555944 ZCCHC6Q5VYS8 1495 aaKnown RBP32.27■■■□□ 2.76
NSFL1C-213ENST00000555944 SHROOM4Q9ULL8 1493 aa32.01■■■□□ 2.71
NSFL1C-213ENST00000555944 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
NSFL1C-213ENST00000555944 DCAF1Q9Y4B6 1507 aa31.46■■■□□ 2.63
NSFL1C-213ENST00000555944 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
NSFL1C-213ENST00000555944 ABCC9O60706 1549 aa30.81■■■□□ 2.52
NSFL1C-213ENST00000555944 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
NSFL1C-213ENST00000555944 SCRIBQ14160 1630 aa30.63■■■□□ 2.49
NSFL1C-213ENST00000555944 NACADO15069 1562 aa30.5■■■□□ 2.47
NSFL1C-213ENST00000555944 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
NSFL1C-213ENST00000555944 CHIC1Q5VXU3 224 aa30.01■■■□□ 2.39
NSFL1C-213ENST00000555944 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
NSFL1C-213ENST00000555944 CECR2Q9BXF3 1484 aa29.83■■■□□ 2.37
NSFL1C-213ENST00000555944 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
NSFL1C-213ENST00000555944 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
NSFL1C-213ENST00000555944 WIZO95785 1651 aa29.52■■■□□ 2.32
NSFL1C-213ENST00000555944 BAZ1AQ9NRL2 1556 aaPredicted RBP29.44■■■□□ 2.3
NSFL1C-213ENST00000555944 PCGF6Q9BYE7 350 aa29.41■■■□□ 2.3
NSFL1C-213ENST00000555944 HRCP23327 699 aa29.4■■■□□ 2.3
NSFL1C-213ENST00000555944 BICRAQ9NZM4 1560 aa29.34■■■□□ 2.29
NSFL1C-213ENST00000555944 LOC105371045A0A1W2PR82 267 aa29.31■■■□□ 2.28
NSFL1C-213ENST00000555944 SMARCA4P51532 1647 aa29.29■■■□□ 2.28
NSFL1C-213ENST00000555944 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.28
NSFL1C-213ENST00000555944 TOP2AP11388 1531 aaKnown RBP29.08■■■□□ 2.25
NSFL1C-213ENST00000555944 PPARGC1BQ86YN6 1023 aaKnown RBP29.05■■■□□ 2.24
NSFL1C-213ENST00000555944 TRIM41Q8WV44 630 aa29.03■■■□□ 2.24
NSFL1C-213ENST00000555944 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
NSFL1C-213ENST00000555944 SMARCA2P51531 1590 aa28.9■■■□□ 2.22
NSFL1C-213ENST00000555944 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
NSFL1C-213ENST00000555944 PEG3Q9GZU2 1588 aa28.79■■■□□ 2.2
NSFL1C-213ENST00000555944 FAM9AQ8IZU1 332 aaPredicted RBP28.71■■■□□ 2.19
NSFL1C-213ENST00000555944 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
NSFL1C-213ENST00000555944 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
NSFL1C-213ENST00000555944 TRIM26Q12899 539 aaPredicted RBP28.59■■■□□ 2.17
NSFL1C-213ENST00000555944 EHMT2Q96KQ7 1210 aa28.54■■■□□ 2.16
NSFL1C-213ENST00000555944 BAZ1BQ9UIG0 1483 aaKnown RBP28.51■■■□□ 2.16
NSFL1C-213ENST00000555944 HMGXB3Q12766 1538 aa28.2■■■□□ 2.1
NSFL1C-213ENST00000555944 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
NSFL1C-213ENST00000555944 NCAPD3P42695 1498 aa28.19■■■□□ 2.1
NSFL1C-213ENST00000555944 SOGA1O94964 1423 aa28.19■■■□□ 2.1
NSFL1C-213ENST00000555944 SYNJ1O43426 1573 aa28.13■■■□□ 2.09
NSFL1C-213ENST00000555944 RUSC2Q8N2Y8 1516 aa28.09■■■□□ 2.09
NSFL1C-213ENST00000555944 EEA1Q15075 1411 aa27.99■■■□□ 2.07
NSFL1C-213ENST00000555944 CSRNP3Q8WYN3 585 aa27.93■■■□□ 2.06
NSFL1C-213ENST00000555944 ZEB1P37275 1124 aaPredicted RBP27.9■■■□□ 2.06
NSFL1C-213ENST00000555944 TOP2BQ02880 1626 aa27.85■■■□□ 2.05
NSFL1C-213ENST00000555944 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
NSFL1C-213ENST00000555944 BIVM-ERCC5R4GMW8 1640 aa27.8■■■□□ 2.04
NSFL1C-213ENST00000555944 CFTRP13569 1480 aa27.8■■■□□ 2.04
NSFL1C-213ENST00000555944 TNIKQ9UKE5 1360 aa27.79■■■□□ 2.04
NSFL1C-213ENST00000555944 CEP162Q5TB80 1403 aa27.79■■■□□ 2.04
NSFL1C-213ENST00000555944 GOLGA3Q08378 1498 aa27.76■■■□□ 2.03
NSFL1C-213ENST00000555944 UBTFP17480 764 aaKnown RBP27.71■■■□□ 2.03
NSFL1C-213ENST00000555944 CUX1P39880 1505 aa27.69■■■□□ 2.02
NSFL1C-213ENST00000555944 KIF21BO75037 1637 aa27.69■■■□□ 2.02
NSFL1C-213ENST00000555944 PRDM2Q13029 1718 aa27.67■■■□□ 2.02
NSFL1C-213ENST00000555944 CEP164Q9UPV0 1460 aa27.67■■■□□ 2.02
NSFL1C-213ENST00000555944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.63■■■□□ 2.01
NSFL1C-213ENST00000555944 TTBK1Q5TCY1 1321 aaPredicted RBP27.63■■■□□ 2.01
NSFL1C-213ENST00000555944 CADPSQ9ULU8 1353 aa27.57■■■□□ 2
NSFL1C-213ENST00000555944 RAPGEF2Q9Y4G8 1499 aa27.55■■■□□ 2
NSFL1C-213ENST00000555944 CCER1Q8TC90 406 aaPredicted RBP27.45■■□□□ 1.98
NSFL1C-213ENST00000555944 CLIP1P30622 1438 aa27.39■■□□□ 1.97
NSFL1C-213ENST00000555944 PRXQ9BXM0 1461 aa27.38■■□□□ 1.97
NSFL1C-213ENST00000555944 KIF27Q86VH2 1401 aa27.37■■□□□ 1.97
NSFL1C-213ENST00000555944 SCAF1Q9H7N4 1312 aaKnown RBP27.34■■□□□ 1.97
NSFL1C-213ENST00000555944 ERICH3Q5RHP9 1530 aa27.34■■□□□ 1.97
NSFL1C-213ENST00000555944 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
NSFL1C-213ENST00000555944 NESP48681 1621 aa27.3■■□□□ 1.96
NSFL1C-213ENST00000555944 FGD5Q6ZNL6 1462 aa27.28■■□□□ 1.96
NSFL1C-213ENST00000555944 RANGAP1P46060 587 aaPredicted RBP27.27■■□□□ 1.96
NSFL1C-213ENST00000555944 CUX2O14529 1486 aa27.23■■□□□ 1.95
NSFL1C-213ENST00000555944 DNAJC5BQ9UF47 199 aa27.22■■□□□ 1.95
NSFL1C-213ENST00000555944 VPS8Q8N3P4 1428 aa27.22■■□□□ 1.95
NSFL1C-213ENST00000555944 DNMBPQ6XZF7 1577 aa27.14■■□□□ 1.94
NSFL1C-213ENST00000555944 LAMC3Q9Y6N6 1575 aa27.11■■□□□ 1.93
NSFL1C-213ENST00000555944 IGF1RP08069 1367 aa27.11■■□□□ 1.93
NSFL1C-213ENST00000555944 TOPBP1Q92547 1522 aa27.1■■□□□ 1.93
NSFL1C-213ENST00000555944 ARAP1Q96P48 1450 aa27.07■■□□□ 1.92
NSFL1C-213ENST00000555944 RAD54L2Q9Y4B4 1467 aa27.05■■□□□ 1.92
NSFL1C-213ENST00000555944 POLA1P09884 1462 aaPredicted RBP27.04■■□□□ 1.92
NSFL1C-213ENST00000555944 DIEXFQ68CQ4 756 aaKnown RBP27.01■■□□□ 1.91
NSFL1C-213ENST00000555944 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
NSFL1C-213ENST00000555944 URB2Q14146 1524 aaKnown RBP26.98■■□□□ 1.91
NSFL1C-213ENST00000555944 NEUROD1Q13562 356 aa26.97■■□□□ 1.91
NSFL1C-213ENST00000555944 ABCA10Q8WWZ4 1543 aa26.97■■□□□ 1.91
NSFL1C-213ENST00000555944 APLP2Q06481 763 aa26.94■■□□□ 1.9
NSFL1C-213ENST00000555944 ARHGAP35Q9NRY4 1499 aa26.93■■□□□ 1.9
NSFL1C-213ENST00000555944 KIF21AQ7Z4S6 1674 aa26.91■■□□□ 1.9
NSFL1C-213ENST00000555944 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
NSFL1C-213ENST00000555944 PDS5BQ9NTI5 1447 aa26.89■■□□□ 1.9
NSFL1C-213ENST00000555944 HNRNPUL2Q1KMD3 747 aaKnown RBP26.88■■□□□ 1.89
NSFL1C-213ENST00000555944 PELP1Q8IZL8 1130 aaKnown RBP26.87■■□□□ 1.89
NSFL1C-213ENST00000555944 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
NSFL1C-213ENST00000555944 KANK4Q5T7N3 995 aaPredicted RBP26.75■■□□□ 1.87
NSFL1C-213ENST00000555944 CUL7Q14999 1698 aa26.75■■□□□ 1.87
NSFL1C-213ENST00000555944 ABCA5Q8WWZ7 1642 aa26.72■■□□□ 1.87
NSFL1C-213ENST00000555944 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms