RNA–Protein interactions for RNA: ENST00000555738.6

NUMB-217, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-217ENST00000555738 AEBP2Q6ZN18 517 aaPredicted RBP19.07■□□□□ 0.64
NUMB-217ENST00000555738 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
NUMB-217ENST00000555738 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
NUMB-217ENST00000555738 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
NUMB-217ENST00000555738 NISCHQ9Y2I1 1504 aa15.28■□□□□ 0.04
NUMB-217ENST00000555738 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
NUMB-217ENST00000555738 FOXD1Q16676 465 aa14.98□□□□□ -0.01
NUMB-217ENST00000555738 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
NUMB-217ENST00000555738 ADRA2BP18089 450 aa14.44□□□□□ -0.1
NUMB-217ENST00000555738 PIAS4Q8N2W9 510 aaPredicted RBP14.13□□□□□ -0.15
NUMB-217ENST00000555738 ABCC9O60706 1549 aa13.95□□□□□ -0.18
NUMB-217ENST00000555738 MSH5O43196 834 aa13.79□□□□□ -0.2
NUMB-217ENST00000555738 CCDC180Q9P1Z9 1646 aa13.73□□□□□ -0.21
NUMB-217ENST00000555738 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
NUMB-217ENST00000555738 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
NUMB-217ENST00000555738 SCAF1Q9H7N4 1312 aaKnown RBP13.19□□□□□ -0.3
NUMB-217ENST00000555738 RB1CC1Q8TDY2 1594 aa13.17□□□□□ -0.3
NUMB-217ENST00000555738 KCNA4P22459 653 aa13.14□□□□□ -0.31
NUMB-217ENST00000555738 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
NUMB-217ENST00000555738 NACADO15069 1562 aa13.06□□□□□ -0.32
NUMB-217ENST00000555738 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
NUMB-217ENST00000555738 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
NUMB-217ENST00000555738 CNKSR2Q8WXI2 1034 aa12.98□□□□□ -0.33
NUMB-217ENST00000555738 DCAF8L2P0C7V8 631 aa12.98□□□□□ -0.33
NUMB-217ENST00000555738 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
NUMB-217ENST00000555738 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
NUMB-217ENST00000555738 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
NUMB-217ENST00000555738 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
NUMB-217ENST00000555738 MYO15BQ96JP2 1530 aa12.85□□□□□ -0.35
NUMB-217ENST00000555738 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
NUMB-217ENST00000555738 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
NUMB-217ENST00000555738 HOXD11P31277 338 aaPredicted RBP12.69□□□□□ -0.38
NUMB-217ENST00000555738 DCAF1Q9Y4B6 1507 aa12.61□□□□□ -0.39
NUMB-217ENST00000555738 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
NUMB-217ENST00000555738 CC2D2AQ9P2K1 1620 aa12.6□□□□□ -0.39
NUMB-217ENST00000555738 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
NUMB-217ENST00000555738 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.41
NUMB-217ENST00000555738 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
NUMB-217ENST00000555738 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
NUMB-217ENST00000555738 POTEDQ86YR6 584 aa12.46□□□□□ -0.42
NUMB-217ENST00000555738 DNAJC5Q9H3Z4 198 aa12.41□□□□□ -0.42
NUMB-217ENST00000555738 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
NUMB-217ENST00000555738 SUPT5HO00267 1087 aaKnown RBP12.2□□□□□ -0.46
NUMB-217ENST00000555738 EHMT2Q96KQ7 1210 aa12.2□□□□□ -0.46
NUMB-217ENST00000555738 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
NUMB-217ENST00000555738 ZBTB22O15209 634 aa12.12□□□□□ -0.47
NUMB-217ENST00000555738 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
NUMB-217ENST00000555738 CUX2O14529 1486 aa12.09□□□□□ -0.47
NUMB-217ENST00000555738 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
NUMB-217ENST00000555738 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.48
NUMB-217ENST00000555738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.483e-7■□□□□ 9.2
NUMB-217ENST00000555738 ERCC6Q03468 1493 aa12.01□□□□□ -0.49
NUMB-217ENST00000555738 ATAD2BQ9ULI0 1458 aa12.01□□□□□ -0.49
NUMB-217ENST00000555738 NESP48681 1621 aa11.95□□□□□ -0.5
NUMB-217ENST00000555738 SMARCA2P51531 1590 aa11.93□□□□□ -0.5
NUMB-217ENST00000555738 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
NUMB-217ENST00000555738 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
NUMB-217ENST00000555738 U3KPZ7 1027 aaPredicted RBP11.89□□□□□ -0.51
NUMB-217ENST00000555738 MYCNP04198 464 aaPredicted RBP11.88□□□□□ -0.51
NUMB-217ENST00000555738 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
NUMB-217ENST00000555738 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
NUMB-217ENST00000555738 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
NUMB-217ENST00000555738 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
NUMB-217ENST00000555738 BAZ1AQ9NRL2 1556 aaPredicted RBP11.83□□□□□ -0.52
NUMB-217ENST00000555738 THOC2Q8NI27 1593 aaKnown RBP11.82□□□□□ -0.52
NUMB-217ENST00000555738 LAMC3Q9Y6N6 1575 aa11.81□□□□□ -0.52
NUMB-217ENST00000555738 MROH2BQ7Z745 1585 aa11.77□□□□□ -0.53
NUMB-217ENST00000555738 KIF21AQ7Z4S6 1674 aa11.76□□□□□ -0.53
NUMB-217ENST00000555738 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
NUMB-217ENST00000555738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
NUMB-217ENST00000555738 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
NUMB-217ENST00000555738 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
NUMB-217ENST00000555738 C1QBPQ07021 282 aaKnown RBP11.7□□□□□ -0.54
NUMB-217ENST00000555738 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
NUMB-217ENST00000555738 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
NUMB-217ENST00000555738 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
NUMB-217ENST00000555738 MRC2Q9UBG0 1479 aa11.64□□□□□ -0.55
NUMB-217ENST00000555738 WDR62O43379 1518 aa11.63□□□□□ -0.55
NUMB-217ENST00000555738 WIZO95785 1651 aa11.6□□□□□ -0.55
NUMB-217ENST00000555738 APLP2Q06481 763 aa11.58□□□□□ -0.55
NUMB-217ENST00000555738 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
NUMB-217ENST00000555738 ATF5Q9Y2D1 282 aaPredicted RBP11.56□□□□□ -0.56
NUMB-217ENST00000555738 FANCD2Q9BXW9 1451 aa11.55□□□□□ -0.56
NUMB-217ENST00000555738 CEP164Q9UPV0 1460 aa11.55□□□□□ -0.56
NUMB-217ENST00000555738 CFTRP13569 1480 aa11.54□□□□□ -0.56
NUMB-217ENST00000555738 TOP2AP11388 1531 aaKnown RBP11.53□□□□□ -0.56
NUMB-217ENST00000555738 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
NUMB-217ENST00000555738 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
NUMB-217ENST00000555738 CAPN15O75808 1086 aa11.44□□□□□ -0.58
NUMB-217ENST00000555738 CACNB1Q02641 598 aaPredicted RBP11.44□□□□□ -0.58
NUMB-217ENST00000555738 ZNF219Q9P2Y4 722 aaPredicted RBP11.43□□□□□ -0.58
NUMB-217ENST00000555738 LOC105371045A0A1W2PR82 267 aa11.4□□□□□ -0.58
NUMB-217ENST00000555738 TRHP20396 242 aaPredicted RBP11.4□□□□□ -0.58
NUMB-217ENST00000555738 HRCP23327 699 aa11.4□□□□□ -0.58
NUMB-217ENST00000555738 RIMBP3CA6NJZ7 1639 aa11.38□□□□□ -0.59
NUMB-217ENST00000555738 RIMBP3BA6NNM3 1639 aa11.38□□□□□ -0.59
NUMB-217ENST00000555738 RIMBP3Q9UFD9 1639 aa11.38□□□□□ -0.59
NUMB-217ENST00000555738 ZNF608Q9ULD9 1512 aaPredicted RBP11.38□□□□□ -0.59
NUMB-217ENST00000555738 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
NUMB-217ENST00000555738 IFT140Q96RY7 1462 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms