RNA–Protein interactions for RNA: ENST00000555408.5

CDK2-208, Transcript of cyclin dependent kinase 2, humanhuman

TSL 3

Gene CDK2, Length 2,598 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-208ENST00000555408 NISCHQ9Y2I1 1504 aa26.16■■□□□ 1.78
CDK2-208ENST00000555408 SHROOM4Q9ULL8 1493 aa23.04■■□□□ 1.28
CDK2-208ENST00000555408 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
CDK2-208ENST00000555408 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
CDK2-208ENST00000555408 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
CDK2-208ENST00000555408 MYO15BQ96JP2 1530 aa22.09■■□□□ 1.13
CDK2-208ENST00000555408 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
CDK2-208ENST00000555408 HRCP23327 699 aa21.94■■□□□ 1.1
CDK2-208ENST00000555408 PCGF6Q9BYE7 350 aa21.91■■□□□ 1.1
CDK2-208ENST00000555408 CCDC180Q9P1Z9 1646 aa21.85■■□□□ 1.09
CDK2-208ENST00000555408 PPARGC1BQ86YN6 1023 aaKnown RBP21.7■■□□□ 1.06
CDK2-208ENST00000555408 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
CDK2-208ENST00000555408 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
CDK2-208ENST00000555408 TRIM26Q12899 539 aaPredicted RBP21.2■□□□□ 0.98
CDK2-208ENST00000555408 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
CDK2-208ENST00000555408 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.97
CDK2-208ENST00000555408 TRIM41Q8WV44 630 aa21.01■□□□□ 0.95
CDK2-208ENST00000555408 ABCC9O60706 1549 aa20.95■□□□□ 0.94
CDK2-208ENST00000555408 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
CDK2-208ENST00000555408 SCRIBQ14160 1630 aa20.92■□□□□ 0.94
CDK2-208ENST00000555408 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
CDK2-208ENST00000555408 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.91
CDK2-208ENST00000555408 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.88
CDK2-208ENST00000555408 SCAF1Q9H7N4 1312 aaKnown RBP20.54■□□□□ 0.88
CDK2-208ENST00000555408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.5■□□□□ 0.87
CDK2-208ENST00000555408 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
CDK2-208ENST00000555408 TTBK1Q5TCY1 1321 aaPredicted RBP20.45■□□□□ 0.86
CDK2-208ENST00000555408 CCER1Q8TC90 406 aaPredicted RBP20.4■□□□□ 0.86
CDK2-208ENST00000555408 WIZO95785 1651 aa20.38■□□□□ 0.85
CDK2-208ENST00000555408 NACADO15069 1562 aa20.22■□□□□ 0.83
CDK2-208ENST00000555408 PELP1Q8IZL8 1130 aaKnown RBP20.22■□□□□ 0.83
CDK2-208ENST00000555408 NEUROD1Q13562 356 aa20.19■□□□□ 0.82
CDK2-208ENST00000555408 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
CDK2-208ENST00000555408 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
CDK2-208ENST00000555408 DIEXFQ68CQ4 756 aaKnown RBP20.14■□□□□ 0.81
CDK2-208ENST00000555408 BAZ1AQ9NRL2 1556 aaPredicted RBP20.11■□□□□ 0.81
CDK2-208ENST00000555408 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
CDK2-208ENST00000555408 EIF4G1Q04637 1599 aaKnown RBP20.05■□□□□ 0.8
CDK2-208ENST00000555408 SOGA1O94964 1423 aa20.04■□□□□ 0.8
CDK2-208ENST00000555408 GTF3C3Q9Y5Q9 886 aa20.03■□□□□ 0.8
CDK2-208ENST00000555408 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
CDK2-208ENST00000555408 CEP162Q5TB80 1403 aa20.02■□□□□ 0.8
CDK2-208ENST00000555408 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
CDK2-208ENST00000555408 CENPBP07199 599 aaPredicted RBP19.94■□□□□ 0.78
CDK2-208ENST00000555408 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
CDK2-208ENST00000555408 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
CDK2-208ENST00000555408 TOP2AP11388 1531 aaKnown RBP19.91■□□□□ 0.78
CDK2-208ENST00000555408 YTHDC1Q96MU7 727 aaKnown RBP19.9■□□□□ 0.78
CDK2-208ENST00000555408 TNIKQ9UKE5 1360 aa19.89■□□□□ 0.77
CDK2-208ENST00000555408 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
CDK2-208ENST00000555408 HNRNPUL2Q1KMD3 747 aaKnown RBP19.86■□□□□ 0.77
CDK2-208ENST00000555408 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
CDK2-208ENST00000555408 ZNF316A6NFI3 1004 aaPredicted RBP19.84■□□□□ 0.77
CDK2-208ENST00000555408 RANGAP1P46060 587 aaPredicted RBP19.8■□□□□ 0.76
CDK2-208ENST00000555408 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
CDK2-208ENST00000555408 GOLGA3Q08378 1498 aa19.71■□□□□ 0.75
CDK2-208ENST00000555408 MIER1Q8N108 512 aa19.71■□□□□ 0.75
CDK2-208ENST00000555408 EEA1Q15075 1411 aa19.69■□□□□ 0.74
CDK2-208ENST00000555408 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
CDK2-208ENST00000555408 APLP2Q06481 763 aa19.59■□□□□ 0.73
CDK2-208ENST00000555408 CLIP1P30622 1438 aa19.59■□□□□ 0.73
CDK2-208ENST00000555408 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
CDK2-208ENST00000555408 SYNJ1O43426 1573 aa19.54■□□□□ 0.72
CDK2-208ENST00000555408 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
CDK2-208ENST00000555408 VPS8Q8N3P4 1428 aa19.47■□□□□ 0.71
CDK2-208ENST00000555408 KIF21BO75037 1637 aa19.42■□□□□ 0.7
CDK2-208ENST00000555408 BICRAQ9NZM4 1560 aa19.39■□□□□ 0.69
CDK2-208ENST00000555408 KANK4Q5T7N3 995 aaPredicted RBP19.33■□□□□ 0.69
CDK2-208ENST00000555408 ATAD2BQ9ULI0 1458 aa19.31■□□□□ 0.68
CDK2-208ENST00000555408 BAZ1BQ9UIG0 1483 aaKnown RBP19.31■□□□□ 0.68
CDK2-208ENST00000555408 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
CDK2-208ENST00000555408 ITGAEP38570 1179 aa19.28■□□□□ 0.68
CDK2-208ENST00000555408 DHX57Q6P158 1386 aaKnown RBP19.27■□□□□ 0.68
CDK2-208ENST00000555408 MYT1Q01538 1121 aa19.2■□□□□ 0.66
CDK2-208ENST00000555408 ARAP1Q96P48 1450 aa19.18■□□□□ 0.66
CDK2-208ENST00000555408 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
CDK2-208ENST00000555408 SUPT16HQ9Y5B9 1047 aaKnown RBP19.15■□□□□ 0.66
CDK2-208ENST00000555408 CLSPNQ9HAW4 1339 aa19.13■□□□□ 0.65
CDK2-208ENST00000555408 PRXQ9BXM0 1461 aa19.11■□□□□ 0.65
CDK2-208ENST00000555408 KCNH8Q96L42 1107 aa19.1■□□□□ 0.65
CDK2-208ENST00000555408 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
CDK2-208ENST00000555408 CCNB3Q8WWL7 1395 aa19.03■□□□□ 0.64
CDK2-208ENST00000555408 RRBP1Q9P2E9 1410 aaKnown RBP19.02■□□□□ 0.64
CDK2-208ENST00000555408 BIVM-ERCC5R4GMW8 1640 aa19.02■□□□□ 0.63
CDK2-208ENST00000555408 CUX1P39880 1505 aa19■□□□□ 0.63
CDK2-208ENST00000555408 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
CDK2-208ENST00000555408 ARHGAP35Q9NRY4 1499 aa18.97■□□□□ 0.63
CDK2-208ENST00000555408 BCANQ96GW7 911 aa18.97■□□□□ 0.63
CDK2-208ENST00000555408 RAB3GAP2Q9H2M9 1393 aa18.96■□□□□ 0.63
CDK2-208ENST00000555408 SIN3AQ96ST3 1273 aa18.94■□□□□ 0.62
CDK2-208ENST00000555408 ATP1B4Q9UN42 357 aaPredicted RBP18.93■□□□□ 0.62
CDK2-208ENST00000555408 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
CDK2-208ENST00000555408 HIRIP3Q9BW71 556 aaPredicted RBP18.92■□□□□ 0.62
CDK2-208ENST00000555408 FAM50AQ14320 339 aaKnown RBP18.92■□□□□ 0.62
CDK2-208ENST00000555408 TSHZ2Q9NRE2 1034 aa18.92■□□□□ 0.62
CDK2-208ENST00000555408 P3H3Q8IVL6 736 aa18.91■□□□□ 0.62
CDK2-208ENST00000555408 CUX2O14529 1486 aa18.88■□□□□ 0.61
CDK2-208ENST00000555408 MAPKBP1O60336 1514 aa18.85■□□□□ 0.61
CDK2-208ENST00000555408 FKBP8Q14318 412 aa18.82■□□□□ 0.6
CDK2-208ENST00000555408 IGF1RP08069 1367 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms