RNA–Protein interactions for RNA: ENST00000554357.5

TRIP11-202, Transcript of thyroid hormone receptor interactor 11, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIP11, Length 5,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP11-202ENST00000554357 CHIC1Q5VXU3 224 aa7.6□□□□□ -1.19
TRIP11-202ENST00000554357 AEBP2Q6ZN18 517 aaPredicted RBP7.55□□□□□ -1.2
TRIP11-202ENST00000554357 SENP3Q9H4L4 574 aaPredicted RBP6.71□□□□□ -1.34
TRIP11-202ENST00000554357 PHF23Q9BUL5 403 aaPredicted RBP6.53□□□□□ -1.36
TRIP11-202ENST00000554357 PLPPR3Q6T4P5 718 aa6.28□□□□□ -1.4
TRIP11-202ENST00000554357 FOXD1Q16676 465 aa6.03□□□□□ -1.44
TRIP11-202ENST00000554357 EHMT2Q96KQ7 1210 aa5.97□□□□□ -1.45
TRIP11-202ENST00000554357 DCAF8L2P0C7V8 631 aa5.93□□□□□ -1.46
TRIP11-202ENST00000554357 PIAS4Q8N2W9 510 aaPredicted RBP5.83□□□□□ -1.48
TRIP11-202ENST00000554357 MSH5O43196 834 aa5.82□□□□□ -1.48
TRIP11-202ENST00000554357 ADRA2BP18089 450 aa5.81□□□□□ -1.48
TRIP11-202ENST00000554357 MYT1LQ9UL68 1186 aa5.71□□□□□ -1.5
TRIP11-202ENST00000554357 PPP6R1Q9UPN7 881 aa5.69□□□□□ -1.5
TRIP11-202ENST00000554357 SCAF1Q9H7N4 1312 aaKnown RBP5.64□□□□□ -1.51
TRIP11-202ENST00000554357 NCBP3Q53F19 620 aaKnown RBP5.56□□□□□ -1.52
TRIP11-202ENST00000554357 ATP1B4Q9UN42 357 aaPredicted RBP5.54□□□□□ -1.52
TRIP11-202ENST00000554357 MYT1Q01538 1121 aa5.51□□□□□ -1.53
TRIP11-202ENST00000554357 RANGAP1P46060 587 aaPredicted RBP5.49□□□□□ -1.53
TRIP11-202ENST00000554357 PPP4R3CPQ6ZMV5 832 aa5.48□□□□□ -1.53
TRIP11-202ENST00000554357 CNKSR2Q8WXI2 1034 aa5.39□□□□□ -1.55
TRIP11-202ENST00000554357 SLC24A1O60721 1099 aa5.35□□□□□ -1.55
TRIP11-202ENST00000554357 DMRT2Q9Y5R5 561 aa5.29□□□□□ -1.56
TRIP11-202ENST00000554357 RNF216Q9NWF9 866 aaPredicted RBP5.25□□□□□ -1.57
TRIP11-202ENST00000554357 KCNA4P22459 653 aa5.24□□□□□ -1.57
TRIP11-202ENST00000554357 DCAF8L1A6NGE4 600 aa5.22□□□□□ -1.57
TRIP11-202ENST00000554357 MAPK8IP2Q13387 824 aaPredicted RBP5.21□□□□□ -1.58
TRIP11-202ENST00000554357 HAP1P54257 671 aaPredicted RBP5.18□□□□□ -1.58
TRIP11-202ENST00000554357 NPM3O75607 178 aaKnown RBP5.17□□□□□ -1.58
TRIP11-202ENST00000554357 SLC4A1APQ9BWU0 796 aaKnown RBP5.17□□□□□ -1.58
TRIP11-202ENST00000554357 HOXD11P31277 338 aaPredicted RBP5.15□□□□□ -1.58
TRIP11-202ENST00000554357 APLP2Q06481 763 aa5.13□□□□□ -1.59
TRIP11-202ENST00000554357 KLHL34Q8N239 644 aa5.12□□□□□ -1.59
TRIP11-202ENST00000554357 POLR3GLQ9BT43 218 aa5.11□□□□□ -1.59
TRIP11-202ENST00000554357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.08□□□□□ -1.69e-7■■■□□ 15.9
TRIP11-202ENST00000554357 POTEDQ86YR6 584 aa5.07□□□□□ -1.6
TRIP11-202ENST00000554357 NBR1Q14596 966 aa5.06□□□□□ -1.6
TRIP11-202ENST00000554357 CCER1Q8TC90 406 aaPredicted RBP5.05□□□□□ -1.6
TRIP11-202ENST00000554357 DNAJC5BQ9UF47 199 aa5.05□□□□□ -1.6
TRIP11-202ENST00000554357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.04□□□□□ -1.6
TRIP11-202ENST00000554357 HNRNPUL2Q1KMD3 747 aaKnown RBP5.04□□□□□ -1.6
TRIP11-202ENST00000554357 TTBK1Q5TCY1 1321 aaPredicted RBP5.01□□□□□ -1.61
TRIP11-202ENST00000554357 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.01□□□□□ -1.61
TRIP11-202ENST00000554357 AMER1Q5JTC6 1135 aaPredicted RBP4.99□□□□□ -1.61
TRIP11-202ENST00000554357 CFAP44Q96MT7 982 aa4.98□□□□□ -1.61
TRIP11-202ENST00000554357 ARID3AQ99856 593 aa4.98□□□□□ -1.61
TRIP11-202ENST00000554357 FOXD4L1Q9NU39 408 aa4.98□□□□□ -1.61
TRIP11-202ENST00000554357 TULP1O00294 542 aaPredicted RBP4.97□□□□□ -1.61
TRIP11-202ENST00000554357 PLEKHG5O94827 1062 aa4.95□□□□□ -1.62
TRIP11-202ENST00000554357 SAMD1Q6SPF0 538 aaPredicted RBP4.95□□□□□ -1.62
TRIP11-202ENST00000554357 FAM9AQ8IZU1 332 aaPredicted RBP4.94□□□□□ -1.62
TRIP11-202ENST00000554357 MYCNP04198 464 aaPredicted RBP4.94□□□□□ -1.62
TRIP11-202ENST00000554357 ERICH6Q7L0X2 663 aa4.93□□□□□ -1.62
TRIP11-202ENST00000554357 FKBP8Q14318 412 aa4.92□□□□□ -1.62
TRIP11-202ENST00000554357 C14orf37Q86TY3 774 aa4.92□□□□□ -1.62
TRIP11-202ENST00000554357 YTHDC1Q96MU7 727 aaKnown RBP4.89□□□□□ -1.63
TRIP11-202ENST00000554357 ATXN8OSP0DMR3 200 aa4.89□□□□□ -1.63
TRIP11-202ENST00000554357 PELP1Q8IZL8 1130 aaKnown RBP4.89□□□□□ -1.63
TRIP11-202ENST00000554357 C1QBPQ07021 282 aaKnown RBP4.87□□□□□ -1.63
TRIP11-202ENST00000554357 PPP1R1BQ9UD71 204 aaPredicted RBP4.85□□□□□ -1.63
TRIP11-202ENST00000554357 BCANQ96GW7 911 aa4.84□□□□□ -1.63
TRIP11-202ENST00000554357 TPRNQ4KMQ1 711 aa4.83□□□□□ -1.64
TRIP11-202ENST00000554357 PLCD3Q8N3E9 789 aa4.83□□□□□ -1.64
TRIP11-202ENST00000554357 RTN4Q9NQC3 1192 aaKnown RBP4.83□□□□□ -1.64
TRIP11-202ENST00000554357 ZNF219Q9P2Y4 722 aaPredicted RBP4.83□□□□□ -1.64
TRIP11-202ENST00000554357 CACNB1Q02641 598 aaPredicted RBP4.82□□□□□ -1.64
TRIP11-202ENST00000554357 CIZ1Q9ULV3 898 aaPredicted RBP4.82□□□□□ -1.64
TRIP11-202ENST00000554357 CAPN15O75808 1086 aa4.81□□□□□ -1.64
TRIP11-202ENST00000554357 RNF39Q9H2S5 420 aa4.81□□□□□ -1.64
TRIP11-202ENST00000554357 TRIM41Q8WV44 630 aa4.8□□□□□ -1.64
TRIP11-202ENST00000554357 SLC4A2P04920 1241 aa4.8□□□□□ -1.64
TRIP11-202ENST00000554357 U3KPZ7 1027 aaPredicted RBP4.79□□□□□ -1.64
TRIP11-202ENST00000554357 KRI1Q8N9T8 703 aaKnown RBP4.78□□□□□ -1.64
TRIP11-202ENST00000554357 LMOD2Q6P5Q4 547 aa4.78□□□□□ -1.64
TRIP11-202ENST00000554357 ZBTB12Q9Y330 459 aaPredicted RBP4.78□□□□□ -1.64
TRIP11-202ENST00000554357 CSRNP3Q8WYN3 585 aa4.78□□□□□ -1.64
TRIP11-202ENST00000554357 FBLN2P98095 1184 aa4.76□□□□□ -1.65
TRIP11-202ENST00000554357 WDR70Q9NW82 654 aa4.76□□□□□ -1.65
TRIP11-202ENST00000554357 SUPT5HO00267 1087 aaKnown RBP4.74□□□□□ -1.65
TRIP11-202ENST00000554357 TRHP20396 242 aaPredicted RBP4.74□□□□□ -1.65
TRIP11-202ENST00000554357 PAXIP1Q6ZW49 1069 aaPredicted RBP4.74□□□□□ -1.65
TRIP11-202ENST00000554357 PODXL2Q9NZ53 605 aa4.74□□□□□ -1.65
TRIP11-202ENST00000554357 ZBTB22O15209 634 aa4.7□□□□□ -1.66
TRIP11-202ENST00000554357 BCL11AQ9H165 835 aa4.7□□□□□ -1.66
TRIP11-202ENST00000554357 HOMEZQ8IX15 550 aa4.68□□□□□ -1.66
TRIP11-202ENST00000554357 ARID4BQ4LE39 1312 aaPredicted RBP4.68□□□□□ -1.66
TRIP11-202ENST00000554357 PRKCSHP14314 528 aaPredicted RBP4.67□□□□□ -1.66
TRIP11-202ENST00000554357 ZBTB7CA1YPR0 619 aa4.67□□□□□ -1.66
TRIP11-202ENST00000554357 CDK11BP21127 795 aaKnown RBP4.65□□□□□ -1.66
TRIP11-202ENST00000554357 CDK11AQ9UQ88 783 aaPredicted RBP4.65□□□□□ -1.66
TRIP11-202ENST00000554357 USP35Q9P2H5 1018 aa4.64□□□□□ -1.67
TRIP11-202ENST00000554357 FBXO3Q9UK99 471 aa4.63□□□□□ -1.67
TRIP11-202ENST00000554357 MIER1Q8N108 512 aa4.63□□□□□ -1.67
TRIP11-202ENST00000554357 NEFMP07197 916 aa4.61□□□□□ -1.67
TRIP11-202ENST00000554357 POLA2Q14181 598 aa4.61□□□□□ -1.67
TRIP11-202ENST00000554357 HMGB1P09429 215 aaKnown RBP4.61□□□□□ -1.67
TRIP11-202ENST00000554357 CHGAP10645 457 aaKnown RBP4.61□□□□□ -1.67
TRIP11-202ENST00000554357 SPINK5Q9NQ38 1064 aaPredicted RBP4.61□□□□□ -1.67
TRIP11-202ENST00000554357 ABCB7O75027 752 aa4.6□□□□□ -1.67
TRIP11-202ENST00000554357 AEBP1Q8IUX7 1158 aa4.6□□□□□ -1.67
TRIP11-202ENST00000554357 ECM2O94769 699 aaPredicted RBP4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms