RNA–Protein interactions for RNA: ENST00000554247.5

GMFB-206, Transcript of glia maturation factor beta, humanhuman

TSL 4

Gene GMFB, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMFB-206ENST00000554247 AEBP2Q6ZN18 517 aaPredicted RBP31.06■■■□□ 2.56
GMFB-206ENST00000554247 CHIC1Q5VXU3 224 aa30.14■■■□□ 2.42
GMFB-206ENST00000554247 PHF23Q9BUL5 403 aaPredicted RBP26.44■■□□□ 1.82
GMFB-206ENST00000554247 SENP3Q9H4L4 574 aaPredicted RBP26.43■■□□□ 1.82
GMFB-206ENST00000554247 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
GMFB-206ENST00000554247 FOXD1Q16676 465 aa24.51■■□□□ 1.51
GMFB-206ENST00000554247 PLPPR3Q6T4P5 718 aa24.37■■□□□ 1.49
GMFB-206ENST00000554247 PPP6R1Q9UPN7 881 aa23.38■■□□□ 1.33
GMFB-206ENST00000554247 ADRA2BP18089 450 aa23.33■■□□□ 1.33
GMFB-206ENST00000554247 PIAS4Q8N2W9 510 aaPredicted RBP23.05■■□□□ 1.28
GMFB-206ENST00000554247 MSH5O43196 834 aa22.75■■□□□ 1.23
GMFB-206ENST00000554247 CCDC180Q9P1Z9 1646 aa22.11■■□□□ 1.13
GMFB-206ENST00000554247 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
GMFB-206ENST00000554247 PPP4R3CPQ6ZMV5 832 aa21.41■■□□□ 1.02
GMFB-206ENST00000554247 ABCC9O60706 1549 aa21.27■■□□□ 1
GMFB-206ENST00000554247 MAPK8IP2Q13387 824 aaPredicted RBP21.22■□□□□ 0.99
GMFB-206ENST00000554247 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
GMFB-206ENST00000554247 DMRT2Q9Y5R5 561 aa21.06■□□□□ 0.96
GMFB-206ENST00000554247 ZCCHC6Q5VYS8 1495 aaKnown RBP21.05■□□□□ 0.96
GMFB-206ENST00000554247 DCAF8L2P0C7V8 631 aa21.04■□□□□ 0.96
GMFB-206ENST00000554247 CNKSR2Q8WXI2 1034 aa20.89■□□□□ 0.93
GMFB-206ENST00000554247 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
GMFB-206ENST00000554247 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
GMFB-206ENST00000554247 NACADO15069 1562 aa20.69■□□□□ 0.9
GMFB-206ENST00000554247 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
GMFB-206ENST00000554247 KCNA4P22459 653 aa20.63■□□□□ 0.89
GMFB-206ENST00000554247 RB1CC1Q8TDY2 1594 aa20.62■□□□□ 0.89
GMFB-206ENST00000554247 HOXD11P31277 338 aaPredicted RBP20.56■□□□□ 0.88
GMFB-206ENST00000554247 RNF216Q9NWF9 866 aaPredicted RBP20.56■□□□□ 0.88
GMFB-206ENST00000554247 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
GMFB-206ENST00000554247 SHROOM4Q9ULL8 1493 aa20.37■□□□□ 0.85
GMFB-206ENST00000554247 SCRIBQ14160 1630 aa20.32■□□□□ 0.84
GMFB-206ENST00000554247 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
GMFB-206ENST00000554247 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
GMFB-206ENST00000554247 DCAF8L1A6NGE4 600 aa20.04■□□□□ 0.8
GMFB-206ENST00000554247 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
GMFB-206ENST00000554247 BICRAQ9NZM4 1560 aa19.93■□□□□ 0.78
GMFB-206ENST00000554247 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
GMFB-206ENST00000554247 CECR2Q9BXF3 1484 aa19.58■□□□□ 0.72
GMFB-206ENST00000554247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.5■□□□□ 0.715e-8■■■■□ 25.6
GMFB-206ENST00000554247 BAZ1AQ9NRL2 1556 aaPredicted RBP19.48■□□□□ 0.71
GMFB-206ENST00000554247 RNF39Q9H2S5 420 aa19.46■□□□□ 0.71
GMFB-206ENST00000554247 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
GMFB-206ENST00000554247 MROH2BQ7Z745 1585 aa19.43■□□□□ 0.7
GMFB-206ENST00000554247 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
GMFB-206ENST00000554247 SLC4A2P04920 1241 aa19.41■□□□□ 0.7
GMFB-206ENST00000554247 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
GMFB-206ENST00000554247 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
GMFB-206ENST00000554247 WIZO95785 1651 aa19.25■□□□□ 0.67
GMFB-206ENST00000554247 C1QBPQ07021 282 aaKnown RBP19.23■□□□□ 0.67
GMFB-206ENST00000554247 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
GMFB-206ENST00000554247 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
GMFB-206ENST00000554247 U3KPZ7 1027 aaPredicted RBP19.2■□□□□ 0.66
GMFB-206ENST00000554247 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
GMFB-206ENST00000554247 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
GMFB-206ENST00000554247 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
GMFB-206ENST00000554247 FOXD4L1Q9NU39 408 aa19.1■□□□□ 0.65
GMFB-206ENST00000554247 NCAPD3P42695 1498 aa19.08■□□□□ 0.64
GMFB-206ENST00000554247 CACNB1Q02641 598 aaPredicted RBP19.06■□□□□ 0.64
GMFB-206ENST00000554247 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
GMFB-206ENST00000554247 HMGXB3Q12766 1538 aa19.02■□□□□ 0.64
GMFB-206ENST00000554247 ZBTB22O15209 634 aa18.99■□□□□ 0.63
GMFB-206ENST00000554247 MYCNP04198 464 aaPredicted RBP18.96■□□□□ 0.63
GMFB-206ENST00000554247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.91■□□□□ 0.62
GMFB-206ENST00000554247 HNRNPUL2Q1KMD3 747 aaKnown RBP18.91■□□□□ 0.62
GMFB-206ENST00000554247 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
GMFB-206ENST00000554247 SAMD1Q6SPF0 538 aaPredicted RBP18.83■□□□□ 0.6
GMFB-206ENST00000554247 APLP2Q06481 763 aa18.78■□□□□ 0.6
GMFB-206ENST00000554247 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
GMFB-206ENST00000554247 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
GMFB-206ENST00000554247 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
GMFB-206ENST00000554247 CAPN15O75808 1086 aa18.62■□□□□ 0.57
GMFB-206ENST00000554247 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
GMFB-206ENST00000554247 CFTRP13569 1480 aa18.56■□□□□ 0.56
GMFB-206ENST00000554247 ZNF219Q9P2Y4 722 aaPredicted RBP18.55■□□□□ 0.56
GMFB-206ENST00000554247 NESP48681 1621 aa18.52■□□□□ 0.56
GMFB-206ENST00000554247 LAMC3Q9Y6N6 1575 aa18.51■□□□□ 0.55
GMFB-206ENST00000554247 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
GMFB-206ENST00000554247 TRHP20396 242 aaPredicted RBP18.46■□□□□ 0.55
GMFB-206ENST00000554247 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
GMFB-206ENST00000554247 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
GMFB-206ENST00000554247 DSG3P32926 999 aa18.41■□□□□ 0.54
GMFB-206ENST00000554247 ATF5Q9Y2D1 282 aaPredicted RBP18.41■□□□□ 0.54
GMFB-206ENST00000554247 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.54
GMFB-206ENST00000554247 ABCC8Q09428 1581 aa18.35■□□□□ 0.53
GMFB-206ENST00000554247 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
GMFB-206ENST00000554247 TRIM41Q8WV44 630 aa18.32■□□□□ 0.52
GMFB-206ENST00000554247 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
GMFB-206ENST00000554247 WRNQ14191 1432 aaPredicted RBP eCLIP18.3■□□□□ 0.52
GMFB-206ENST00000554247 KIF21AQ7Z4S6 1674 aa18.29■□□□□ 0.52
GMFB-206ENST00000554247 ABCB7O75027 752 aa18.23■□□□□ 0.51
GMFB-206ENST00000554247 CUX1P39880 1505 aa18.2■□□□□ 0.5
GMFB-206ENST00000554247 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
GMFB-206ENST00000554247 MRC2Q9UBG0 1479 aa18.18■□□□□ 0.5
GMFB-206ENST00000554247 URB2Q14146 1524 aaKnown RBP18.16■□□□□ 0.5
GMFB-206ENST00000554247 DNMBPQ6XZF7 1577 aa18.16■□□□□ 0.5
GMFB-206ENST00000554247 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
GMFB-206ENST00000554247 TOPBP1Q92547 1522 aa18.14■□□□□ 0.49
GMFB-206ENST00000554247 BIVM-ERCC5R4GMW8 1640 aa18.13■□□□□ 0.49
GMFB-206ENST00000554247 POLA2Q14181 598 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms