RNA–Protein interactions for RNA: ENST00000554078.1

AC004858.1-201, humanhuman

BASIC

Gene AC004858.1, Length 242 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004858.1-201ENST00000554078 NISCHQ9Y2I1 1504 aa24.37■■□□□ 1.49
AC004858.1-201ENST00000554078 CCDC180Q9P1Z9 1646 aa21.66■■□□□ 1.06
AC004858.1-201ENST00000554078 ABCC9O60706 1549 aa21.62■■□□□ 1.05
AC004858.1-201ENST00000554078 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
AC004858.1-201ENST00000554078 RB1CC1Q8TDY2 1594 aa20.61■□□□□ 0.89
AC004858.1-201ENST00000554078 NACADO15069 1562 aa20.54■□□□□ 0.88
AC004858.1-201ENST00000554078 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
AC004858.1-201ENST00000554078 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
AC004858.1-201ENST00000554078 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
AC004858.1-201ENST00000554078 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
AC004858.1-201ENST00000554078 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
AC004858.1-201ENST00000554078 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
AC004858.1-201ENST00000554078 BICRAQ9NZM4 1560 aa19.99■□□□□ 0.79
AC004858.1-201ENST00000554078 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
AC004858.1-201ENST00000554078 SHROOM4Q9ULL8 1493 aa19.75■□□□□ 0.75
AC004858.1-201ENST00000554078 EIF4G1Q04637 1599 aaKnown RBP19.5■□□□□ 0.71
AC004858.1-201ENST00000554078 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
AC004858.1-201ENST00000554078 CECR2Q9BXF3 1484 aa19.47■□□□□ 0.71
AC004858.1-201ENST00000554078 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
AC004858.1-201ENST00000554078 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
AC004858.1-201ENST00000554078 SMARCA4P51532 1647 aa18.91■□□□□ 0.62
AC004858.1-201ENST00000554078 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
AC004858.1-201ENST00000554078 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
AC004858.1-201ENST00000554078 HMGXB3Q12766 1538 aa18.8■□□□□ 0.6
AC004858.1-201ENST00000554078 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.6
AC004858.1-201ENST00000554078 MROH2BQ7Z745 1585 aa18.77■□□□□ 0.6
AC004858.1-201ENST00000554078 PEG3Q9GZU2 1588 aa18.74■□□□□ 0.59
AC004858.1-201ENST00000554078 ERCC6Q03468 1493 aa18.66■□□□□ 0.58
AC004858.1-201ENST00000554078 NESP48681 1621 aa18.61■□□□□ 0.57
AC004858.1-201ENST00000554078 CUX2O14529 1486 aa18.54■□□□□ 0.56
AC004858.1-201ENST00000554078 WIZO95785 1651 aa18.5■□□□□ 0.55
AC004858.1-201ENST00000554078 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
AC004858.1-201ENST00000554078 LAMC3Q9Y6N6 1575 aa18.48■□□□□ 0.55
AC004858.1-201ENST00000554078 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
AC004858.1-201ENST00000554078 PDS5BQ9NTI5 1447 aa18.46■□□□□ 0.55
AC004858.1-201ENST00000554078 DNAJC5Q9H3Z4 198 aa18.44■□□□□ 0.54
AC004858.1-201ENST00000554078 TOP2AP11388 1531 aaKnown RBP18.3■□□□□ 0.52
AC004858.1-201ENST00000554078 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
AC004858.1-201ENST00000554078 CFTRP13569 1480 aa18.26■□□□□ 0.51
AC004858.1-201ENST00000554078 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
AC004858.1-201ENST00000554078 MRC2Q9UBG0 1479 aa18.23■□□□□ 0.51
AC004858.1-201ENST00000554078 FANCD2Q9BXW9 1451 aa18.21■□□□□ 0.51
AC004858.1-201ENST00000554078 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
AC004858.1-201ENST00000554078 CCDC88BA6NC98 1476 aa18.17■□□□□ 0.5
AC004858.1-201ENST00000554078 WDR62O43379 1518 aa18.14■□□□□ 0.49
AC004858.1-201ENST00000554078 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
AC004858.1-201ENST00000554078 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
AC004858.1-201ENST00000554078 ABCC8Q09428 1581 aa17.88■□□□□ 0.45
AC004858.1-201ENST00000554078 PRDM2Q13029 1718 aa17.88■□□□□ 0.45
AC004858.1-201ENST00000554078 TOPBP1Q92547 1522 aa17.87■□□□□ 0.45
AC004858.1-201ENST00000554078 OSCARQ8IYS5 282 aa17.86■□□□□ 0.45
AC004858.1-201ENST00000554078 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
AC004858.1-201ENST00000554078 ZNF608Q9ULD9 1512 aaPredicted RBP17.79■□□□□ 0.44
AC004858.1-201ENST00000554078 DNMBPQ6XZF7 1577 aa17.78■□□□□ 0.44
AC004858.1-201ENST00000554078 POLA1P09884 1462 aaPredicted RBP17.7■□□□□ 0.42
AC004858.1-201ENST00000554078 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
AC004858.1-201ENST00000554078 SOGA1O94964 1423 aa17.7■□□□□ 0.42
AC004858.1-201ENST00000554078 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.42
AC004858.1-201ENST00000554078 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
AC004858.1-201ENST00000554078 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
AC004858.1-201ENST00000554078 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
AC004858.1-201ENST00000554078 FGD5Q6ZNL6 1462 aa17.62■□□□□ 0.41
AC004858.1-201ENST00000554078 CUX1P39880 1505 aa17.62■□□□□ 0.41
AC004858.1-201ENST00000554078 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
AC004858.1-201ENST00000554078 FBLN2P98095 1184 aa17.61■□□□□ 0.41
AC004858.1-201ENST00000554078 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
AC004858.1-201ENST00000554078 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
AC004858.1-201ENST00000554078 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
AC004858.1-201ENST00000554078 SNAPC4Q5SXM2 1469 aa17.46■□□□□ 0.39
AC004858.1-201ENST00000554078 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
AC004858.1-201ENST00000554078 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
AC004858.1-201ENST00000554078 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
AC004858.1-201ENST00000554078 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
AC004858.1-201ENST00000554078 CYB5RLQ6IPT4 315 aa17.43■□□□□ 0.38
AC004858.1-201ENST00000554078 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
AC004858.1-201ENST00000554078 RIMBP3CA6NJZ7 1639 aa17.42■□□□□ 0.38
AC004858.1-201ENST00000554078 RIMBP3BA6NNM3 1639 aa17.42■□□□□ 0.38
AC004858.1-201ENST00000554078 RIMBP3Q9UFD9 1639 aa17.42■□□□□ 0.38
AC004858.1-201ENST00000554078 CHD1O14646 1710 aa17.4■□□□□ 0.38
AC004858.1-201ENST00000554078 SYNJ2O15056 1496 aa17.38■□□□□ 0.37
AC004858.1-201ENST00000554078 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
AC004858.1-201ENST00000554078 SYNJ1O43426 1573 aa17.33■□□□□ 0.37
AC004858.1-201ENST00000554078 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
AC004858.1-201ENST00000554078 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
AC004858.1-201ENST00000554078 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
AC004858.1-201ENST00000554078 ARAP1Q96P48 1450 aa17.27■□□□□ 0.36
AC004858.1-201ENST00000554078 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
AC004858.1-201ENST00000554078 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
AC004858.1-201ENST00000554078 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
AC004858.1-201ENST00000554078 ERICH3Q5RHP9 1530 aa17.2■□□□□ 0.34
AC004858.1-201ENST00000554078 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
AC004858.1-201ENST00000554078 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
AC004858.1-201ENST00000554078 NUP160Q12769 1436 aa17.17■□□□□ 0.34
AC004858.1-201ENST00000554078 IGF1RP08069 1367 aa17.13■□□□□ 0.33
AC004858.1-201ENST00000554078 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
AC004858.1-201ENST00000554078 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
AC004858.1-201ENST00000554078 JPH4Q96JJ6 628 aa17.1■□□□□ 0.33
AC004858.1-201ENST00000554078 ERCC6L2Q5T890 1561 aa17.04■□□□□ 0.32
AC004858.1-201ENST00000554078 PRG4Q92954 1404 aaPredicted RBP17.03■□□□□ 0.32
AC004858.1-201ENST00000554078 CARMIL1Q5VZK9 1371 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms