RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 NISCHQ9Y2I1 1504 aa20.92■□□□□ 0.94
MARK3-207ENST00000553942 CCDC180Q9P1Z9 1646 aa18.15■□□□□ 0.5
MARK3-207ENST00000553942 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.43
MARK3-207ENST00000553942 ABCC9O60706 1549 aa17.76■□□□□ 0.43
MARK3-207ENST00000553942 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
MARK3-207ENST00000553942 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
MARK3-207ENST00000553942 DCAF1Q9Y4B6 1507 aa17.08■□□□□ 0.32
MARK3-207ENST00000553942 NACADO15069 1562 aa17■□□□□ 0.31
MARK3-207ENST00000553942 SCRIBQ14160 1630 aa16.98■□□□□ 0.31
MARK3-207ENST00000553942 RB1CC1Q8TDY2 1594 aa16.96■□□□□ 0.31
MARK3-207ENST00000553942 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
MARK3-207ENST00000553942 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
MARK3-207ENST00000553942 UNC13AQ9UPW8 1703 aa16.72■□□□□ 0.27
MARK3-207ENST00000553942 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
MARK3-207ENST00000553942 SUPT5HO00267 1087 aaKnown RBP16.52■□□□□ 0.24
MARK3-207ENST00000553942 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
MARK3-207ENST00000553942 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
MARK3-207ENST00000553942 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
MARK3-207ENST00000553942 WIZO95785 1651 aa16.14■□□□□ 0.17
MARK3-207ENST00000553942 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
MARK3-207ENST00000553942 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
MARK3-207ENST00000553942 EIF4G1Q04637 1599 aaKnown RBP16.08■□□□□ 0.16
MARK3-207ENST00000553942 DNAJC5BQ9UF47 199 aa16.01■□□□□ 0.15
MARK3-207ENST00000553942 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
MARK3-207ENST00000553942 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
MARK3-207ENST00000553942 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
MARK3-207ENST00000553942 SMARCA2P51531 1590 aa15.81■□□□□ 0.12
MARK3-207ENST00000553942 PEG3Q9GZU2 1588 aa15.81■□□□□ 0.12
MARK3-207ENST00000553942 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
MARK3-207ENST00000553942 CCDC88BA6NC98 1476 aa15.77■□□□□ 0.11
MARK3-207ENST00000553942 NCAPD3P42695 1498 aa15.76■□□□□ 0.11
MARK3-207ENST00000553942 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
MARK3-207ENST00000553942 HMGXB3Q12766 1538 aa15.66■□□□□ 0.1
MARK3-207ENST00000553942 CHIC1Q5VXU3 224 aa15.6■□□□□ 0.09
MARK3-207ENST00000553942 NESP48681 1621 aa15.55■□□□□ 0.08
MARK3-207ENST00000553942 ABCC8Q09428 1581 aa15.48■□□□□ 0.07
MARK3-207ENST00000553942 CADPSQ9ULU8 1353 aa15.42■□□□□ 0.06
MARK3-207ENST00000553942 CFTRP13569 1480 aa15.4■□□□□ 0.06
MARK3-207ENST00000553942 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
MARK3-207ENST00000553942 FAM9AQ8IZU1 332 aaPredicted RBP15.34■□□□□ 0.05
MARK3-207ENST00000553942 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
MARK3-207ENST00000553942 FANCD2Q9BXW9 1451 aa15.28■□□□□ 0.04
MARK3-207ENST00000553942 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
MARK3-207ENST00000553942 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
MARK3-207ENST00000553942 LAMC3Q9Y6N6 1575 aa15.23■□□□□ 0.03
MARK3-207ENST00000553942 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
MARK3-207ENST00000553942 CUX1P39880 1505 aa15.19■□□□□ 0.02
MARK3-207ENST00000553942 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
MARK3-207ENST00000553942 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
MARK3-207ENST00000553942 ERCC6Q03468 1493 aa15.15■□□□□ 0.02
MARK3-207ENST00000553942 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
MARK3-207ENST00000553942 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
MARK3-207ENST00000553942 LOC105371045A0A1W2PR82 267 aa15.14■□□□□ 0.01
MARK3-207ENST00000553942 SOGA1O94964 1423 aa15.14■□□□□ 0.01
MARK3-207ENST00000553942 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
MARK3-207ENST00000553942 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0
MARK3-207ENST00000553942 TOPBP1Q92547 1522 aa15.08■□□□□ 0
MARK3-207ENST00000553942 TOP2BQ02880 1626 aa15.07■□□□□ 0
MARK3-207ENST00000553942 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
MARK3-207ENST00000553942 BIVM-ERCC5R4GMW8 1640 aa15.02■□□□□ -0
MARK3-207ENST00000553942 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
MARK3-207ENST00000553942 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
MARK3-207ENST00000553942 DNMBPQ6XZF7 1577 aa15□□□□□ -0.01
MARK3-207ENST00000553942 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
MARK3-207ENST00000553942 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
MARK3-207ENST00000553942 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
MARK3-207ENST00000553942 CUX2O14529 1486 aa14.95□□□□□ -0.02
MARK3-207ENST00000553942 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
MARK3-207ENST00000553942 WDR62O43379 1518 aa14.91□□□□□ -0.02
MARK3-207ENST00000553942 ZNF608Q9ULD9 1512 aaPredicted RBP14.91□□□□□ -0.02
MARK3-207ENST00000553942 AQRO60306 1485 aaKnown RBP eCLIP14.9□□□□□ -0.025e-8■■■□□ 18.4
MARK3-207ENST00000553942 RANGAP1P46060 587 aaPredicted RBP14.9□□□□□ -0.02
MARK3-207ENST00000553942 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
MARK3-207ENST00000553942 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
MARK3-207ENST00000553942 ABCA10Q8WWZ4 1543 aa14.82□□□□□ -0.04
MARK3-207ENST00000553942 UBTFP17480 764 aaKnown RBP14.81□□□□□ -0.04
MARK3-207ENST00000553942 IGF1RP08069 1367 aa14.81□□□□□ -0.04
MARK3-207ENST00000553942 RAPGEF2Q9Y4G8 1499 aa14.79□□□□□ -0.04
MARK3-207ENST00000553942 GAPVD1Q14C86 1478 aa14.77□□□□□ -0.04
MARK3-207ENST00000553942 WDR97A6NE52 1622 aa14.77□□□□□ -0.05
MARK3-207ENST00000553942 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
MARK3-207ENST00000553942 FBLN2P98095 1184 aa14.75□□□□□ -0.05
MARK3-207ENST00000553942 CARMIL1Q5VZK9 1371 aa14.72□□□□□ -0.05
MARK3-207ENST00000553942 EEA1Q15075 1411 aa14.72□□□□□ -0.05
MARK3-207ENST00000553942 ABCA5Q8WWZ7 1642 aa14.72□□□□□ -0.05
MARK3-207ENST00000553942 EIF4G3O43432 1585 aaKnown RBP14.72□□□□□ -0.05
MARK3-207ENST00000553942 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
MARK3-207ENST00000553942 SNAPC4Q5SXM2 1469 aa14.66□□□□□ -0.06
MARK3-207ENST00000553942 GOLGA3Q08378 1498 aa14.65□□□□□ -0.06
MARK3-207ENST00000553942 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
MARK3-207ENST00000553942 GRIN2BQ13224 1484 aa14.64□□□□□ -0.07
MARK3-207ENST00000553942 MYT1Q01538 1121 aa14.63□□□□□ -0.07
MARK3-207ENST00000553942 HRCP23327 699 aa14.62□□□□□ -0.07
MARK3-207ENST00000553942 P3H3Q8IVL6 736 aa14.62□□□□□ -0.07
MARK3-207ENST00000553942 KIF21BO75037 1637 aa14.62□□□□□ -0.07
MARK3-207ENST00000553942 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
MARK3-207ENST00000553942 PPARGC1BQ86YN6 1023 aaKnown RBP14.6□□□□□ -0.07
MARK3-207ENST00000553942 ERICH3Q5RHP9 1530 aa14.6□□□□□ -0.07
MARK3-207ENST00000553942 TTBK1Q5TCY1 1321 aaPredicted RBP14.58□□□□□ -0.08
MARK3-207ENST00000553942 CEP162Q5TB80 1403 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms