RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
KTN1-211ENST00000553710 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
KTN1-211ENST00000553710 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
KTN1-211ENST00000553710 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
KTN1-211ENST00000553710 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
KTN1-211ENST00000553710 FOXD1Q16676 465 aa16.8■□□□□ 0.28
KTN1-211ENST00000553710 MSH5O43196 834 aa16.06■□□□□ 0.16
KTN1-211ENST00000553710 PIAS4Q8N2W9 510 aaPredicted RBP15.5■□□□□ 0.07
KTN1-211ENST00000553710 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
KTN1-211ENST00000553710 ADRA2BP18089 450 aa14.98□□□□□ -0.01
KTN1-211ENST00000553710 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
KTN1-211ENST00000553710 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
KTN1-211ENST00000553710 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
KTN1-211ENST00000553710 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
KTN1-211ENST00000553710 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
KTN1-211ENST00000553710 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
KTN1-211ENST00000553710 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
KTN1-211ENST00000553710 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
KTN1-211ENST00000553710 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
KTN1-211ENST00000553710 POTEHQ6S545 545 aa13.2□□□□□ -0.3
KTN1-211ENST00000553710 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
KTN1-211ENST00000553710 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
KTN1-211ENST00000553710 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
KTN1-211ENST00000553710 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
KTN1-211ENST00000553710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
KTN1-211ENST00000553710 DSG3P32926 999 aa12.47□□□□□ -0.41
KTN1-211ENST00000553710 CAPN15O75808 1086 aa12.34□□□□□ -0.43
KTN1-211ENST00000553710 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
KTN1-211ENST00000553710 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.45
KTN1-211ENST00000553710 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.46
KTN1-211ENST00000553710 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
KTN1-211ENST00000553710 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
KTN1-211ENST00000553710 ABCB7O75027 752 aa11.97□□□□□ -0.49
KTN1-211ENST00000553710 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.49
KTN1-211ENST00000553710 TRHP20396 242 aaPredicted RBP11.94□□□□□ -0.5
KTN1-211ENST00000553710 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
KTN1-211ENST00000553710 ZNF219Q9P2Y4 722 aaPredicted RBP11.91□□□□□ -0.5
KTN1-211ENST00000553710 APLP2Q06481 763 aa11.85□□□□□ -0.51
KTN1-211ENST00000553710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
KTN1-211ENST00000553710 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
KTN1-211ENST00000553710 HNRNPUL2Q1KMD3 747 aaKnown RBP11.64□□□□□ -0.55
KTN1-211ENST00000553710 HAX1O00165 279 aa11.54□□□□□ -0.56
KTN1-211ENST00000553710 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
KTN1-211ENST00000553710 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
KTN1-211ENST00000553710 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
KTN1-211ENST00000553710 POLA2Q14181 598 aa11.44□□□□□ -0.58
KTN1-211ENST00000553710 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
KTN1-211ENST00000553710 FXR2P51116 673 aaKnown RBP eCLIP11.33□□□□□ -0.66e-11■■■■■ 44.2
KTN1-211ENST00000553710 EVX2Q03828 476 aa11.33□□□□□ -0.6
KTN1-211ENST00000553710 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
KTN1-211ENST00000553710 LHX8Q68G74 356 aa11.24□□□□□ -0.61
KTN1-211ENST00000553710 PLSCR2Q9NRY7 297 aa11.2□□□□□ -0.62
KTN1-211ENST00000553710 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
KTN1-211ENST00000553710 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
KTN1-211ENST00000553710 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
KTN1-211ENST00000553710 GABBR2O75899 941 aa11.04□□□□□ -0.64
KTN1-211ENST00000553710 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
KTN1-211ENST00000553710 KCNA4P22459 653 aa10.99□□□□□ -0.65
KTN1-211ENST00000553710 PRKAR2AP13861 404 aaKnown RBP10.95□□□□□ -0.66
KTN1-211ENST00000553710 ATF5Q9Y2D1 282 aaPredicted RBP10.88□□□□□ -0.67
KTN1-211ENST00000553710 POTEIP0CG38 1075 aa10.8□□□□□ -0.68
KTN1-211ENST00000553710 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
KTN1-211ENST00000553710 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
KTN1-211ENST00000553710 SPDYE2BA6NHP3 402 aa10.74□□□□□ -0.69
KTN1-211ENST00000553710 SPDYE6P0CI01 402 aa10.74□□□□□ -0.69
KTN1-211ENST00000553710 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
KTN1-211ENST00000553710 CHADLQ6NUI6 762 aa10.64□□□□□ -0.71
KTN1-211ENST00000553710 POTEMA6NI47 508 aa10.62□□□□□ -0.71
KTN1-211ENST00000553710 CLCN6P51797 869 aa10.61□□□□□ -0.71
KTN1-211ENST00000553710 CD44P16070 742 aaKnown RBP10.56□□□□□ -0.72
KTN1-211ENST00000553710 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
KTN1-211ENST00000553710 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
KTN1-211ENST00000553710 DCBLD2Q96PD2 775 aa10.56□□□□□ -0.72
KTN1-211ENST00000553710 FBLN2P98095 1184 aa10.53□□□□□ -0.72
KTN1-211ENST00000553710 FOXD4L1Q9NU39 408 aa10.52□□□□□ -0.73
KTN1-211ENST00000553710 PCDH10Q9P2E7 1040 aa10.52□□□□□ -0.73
KTN1-211ENST00000553710 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
KTN1-211ENST00000553710 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
KTN1-211ENST00000553710 ZNF692Q9BU19 519 aaPredicted RBP10.48□□□□□ -0.73
KTN1-211ENST00000553710 POTEB2H3BUK9 544 aa10.42□□□□□ -0.74
KTN1-211ENST00000553710 FARP1Q9Y4F1 1045 aaPredicted RBP10.42□□□□□ -0.74
KTN1-211ENST00000553710 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
KTN1-211ENST00000553710 MKRN4PQ13434 485 aaPredicted RBP10.34□□□□□ -0.75
KTN1-211ENST00000553710 ATXN8OSP0DMR3 200 aa10.3□□□□□ -0.76
KTN1-211ENST00000553710 PABPN1Q86U42 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
KTN1-211ENST00000553710 GALR2O43603 387 aaPredicted RBP10.28□□□□□ -0.76
KTN1-211ENST00000553710 ZRANB1Q9UGI0 708 aa10.28□□□□□ -0.76
KTN1-211ENST00000553710 LCE2DQ5TA82 110 aaPredicted RBP10.21□□□□□ -0.77
KTN1-211ENST00000553710 SLC4A1APQ9BWU0 796 aaKnown RBP10.21□□□□□ -0.77
KTN1-211ENST00000553710 PELP1Q8IZL8 1130 aaKnown RBP10.17□□□□□ -0.78
KTN1-211ENST00000553710 FAM163AQ96GL9 167 aaPredicted RBP10.14□□□□□ -0.79
KTN1-211ENST00000553710 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
KTN1-211ENST00000553710 MAMSTRQ6ZN01 415 aa10.13□□□□□ -0.79
KTN1-211ENST00000553710 METRNQ9UJH8 293 aa10.1□□□□□ -0.79
KTN1-211ENST00000553710 ZBTB22O15209 634 aa10.09□□□□□ -0.79
KTN1-211ENST00000553710 C7P10643 843 aa10.06□□□□□ -0.8
KTN1-211ENST00000553710 PHF12Q96QT6 1004 aa10.06□□□□□ -0.8
KTN1-211ENST00000553710 SLC39A7Q92504 469 aa10.05□□□□□ -0.8
KTN1-211ENST00000553710 ASTLQ6HA08 431 aaPredicted RBP10.03□□□□□ -0.8
KTN1-211ENST00000553710 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms