RNA–Protein interactions for RNA: ENST00000553653.5

SLCO3A1-204, Transcript of solute carrier organic anion transporter family member 3A1, humanhuman

TSL 5

Gene SLCO3A1, Length 2,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO3A1-204ENST00000553653 NISCHQ9Y2I1 1504 aa52.87■■■■■ 6.05
SLCO3A1-204ENST00000553653 CCDC180Q9P1Z9 1646 aa45.74■■■■■ 4.91
SLCO3A1-204ENST00000553653 ZCCHC6Q5VYS8 1495 aaKnown RBP44.56■■■■■ 4.72
SLCO3A1-204ENST00000553653 SHROOM4Q9ULL8 1493 aa43.7■■■■■ 4.59
SLCO3A1-204ENST00000553653 DCAF1Q9Y4B6 1507 aa43.63■■■■■ 4.58
SLCO3A1-204ENST00000553653 DCAF8L2P0C7V8 631 aa43.45■■■■■ 4.55
SLCO3A1-204ENST00000553653 MYO15BQ96JP2 1530 aa42.84■■■■■ 4.45
SLCO3A1-204ENST00000553653 ABCC9O60706 1549 aa42.81■■■■■ 4.44
SLCO3A1-204ENST00000553653 NACADO15069 1562 aa42.43■■■■■ 4.38
SLCO3A1-204ENST00000553653 SCRIBQ14160 1630 aa42.29■■■■■ 4.36
SLCO3A1-204ENST00000553653 SUPT5HO00267 1087 aaKnown RBP42.28■■■■■ 4.36
SLCO3A1-204ENST00000553653 RB1CC1Q8TDY2 1594 aa41.92■■■■■ 4.3
SLCO3A1-204ENST00000553653 UNC13AQ9UPW8 1703 aa41.33■■■■■ 4.21
SLCO3A1-204ENST00000553653 RSF1Q96T23 1441 aaPredicted RBP41.3■■■■■ 4.2
SLCO3A1-204ENST00000553653 CECR2Q9BXF3 1484 aa41.15■■■■■ 4.18
SLCO3A1-204ENST00000553653 MROH2BQ7Z745 1585 aa40.96■■■■■ 4.15
SLCO3A1-204ENST00000553653 BICRAQ9NZM4 1560 aa40.83■■■■■ 4.13
SLCO3A1-204ENST00000553653 CHIC1Q5VXU3 224 aa40.82■■■■■ 4.12
SLCO3A1-204ENST00000553653 BAZ1AQ9NRL2 1556 aaPredicted RBP40.72■■■■■ 4.11
SLCO3A1-204ENST00000553653 WIZO95785 1651 aa40.68■■■■■ 4.1
SLCO3A1-204ENST00000553653 SMARCA4P51532 1647 aa40.54■■■■■ 4.08
SLCO3A1-204ENST00000553653 PABPN1Q86U42 306 aaKnown RBP eCLIP40.53■■■■■ 4.08
SLCO3A1-204ENST00000553653 TOP2AP11388 1531 aaKnown RBP40.16■■■■■ 4.02
SLCO3A1-204ENST00000553653 PEG3Q9GZU2 1588 aa39.97■■■■□ 3.99
SLCO3A1-204ENST00000553653 EIF4G1Q04637 1599 aaKnown RBP39.88■■■■□ 3.97
SLCO3A1-204ENST00000553653 SMARCA2P51531 1590 aa39.87■■■■□ 3.97
SLCO3A1-204ENST00000553653 CCDC88BA6NC98 1476 aa39.81■■■■□ 3.96
SLCO3A1-204ENST00000553653 ATAD2BQ9ULI0 1458 aa39.7■■■■□ 3.95
SLCO3A1-204ENST00000553653 TRIM41Q8WV44 630 aa39.61■■■■□ 3.93
SLCO3A1-204ENST00000553653 BAZ1BQ9UIG0 1483 aaKnown RBP39.46■■■■□ 3.91
SLCO3A1-204ENST00000553653 LOC105371045A0A1W2PR82 267 aa39.35■■■■□ 3.89
SLCO3A1-204ENST00000553653 ABCC8Q09428 1581 aa39.26■■■■□ 3.88
SLCO3A1-204ENST00000553653 NCAPD3P42695 1498 aa39.19■■■■□ 3.86
SLCO3A1-204ENST00000553653 HMGXB3Q12766 1538 aa39.19■■■■□ 3.86
SLCO3A1-204ENST00000553653 FAM9AQ8IZU1 332 aaPredicted RBP39.03■■■■□ 3.84
SLCO3A1-204ENST00000553653 WRNQ14191 1432 aaPredicted RBP eCLIP38.79■■■■□ 3.8
SLCO3A1-204ENST00000553653 CC2D2AQ9P2K1 1620 aa38.75■■■■□ 3.79
SLCO3A1-204ENST00000553653 SYNJ1O43426 1573 aa38.73■■■■□ 3.79
SLCO3A1-204ENST00000553653 SOGA1O94964 1423 aa38.63■■■■□ 3.77
SLCO3A1-204ENST00000553653 EHMT2Q96KQ7 1210 aa38.53■■■■□ 3.76
SLCO3A1-204ENST00000553653 CFTRP13569 1480 aa38.53■■■■□ 3.76
SLCO3A1-204ENST00000553653 RUSC2Q8N2Y8 1516 aa38.51■■■■□ 3.75
SLCO3A1-204ENST00000553653 EEA1Q15075 1411 aa38.45■■■■□ 3.75
SLCO3A1-204ENST00000553653 TOP2BQ02880 1626 aa38.43■■■■□ 3.74
SLCO3A1-204ENST00000553653 BIVM-ERCC5R4GMW8 1640 aa38.4■■■■□ 3.74
SLCO3A1-204ENST00000553653 PRDM2Q13029 1718 aa38.39■■■■□ 3.74
SLCO3A1-204ENST00000553653 CSRNP3Q8WYN3 585 aa38.27■■■■□ 3.72
SLCO3A1-204ENST00000553653 CUX1P39880 1505 aa38.24■■■■□ 3.71
SLCO3A1-204ENST00000553653 CADPSQ9ULU8 1353 aa38.23■■■■□ 3.71
SLCO3A1-204ENST00000553653 PCGF6Q9BYE7 350 aa38.14■■■■□ 3.7
SLCO3A1-204ENST00000553653 KIF21BO75037 1637 aa38.05■■■■□ 3.68
SLCO3A1-204ENST00000553653 TNIKQ9UKE5 1360 aa38.05■■■■□ 3.68
SLCO3A1-204ENST00000553653 GOLGA3Q08378 1498 aa38.04■■■■□ 3.68
SLCO3A1-204ENST00000553653 CEP164Q9UPV0 1460 aa37.97■■■■□ 3.67
SLCO3A1-204ENST00000553653 CEP162Q5TB80 1403 aa37.95■■■■□ 3.67
SLCO3A1-204ENST00000553653 TRIM26Q12899 539 aaPredicted RBP37.88■■■■□ 3.65
SLCO3A1-204ENST00000553653 NESP48681 1621 aa37.86■■■■□ 3.65
SLCO3A1-204ENST00000553653 FANCD2Q9BXW9 1451 aa37.85■■■■□ 3.65
SLCO3A1-204ENST00000553653 UBTFP17480 764 aaKnown RBP37.82■■■■□ 3.65
SLCO3A1-204ENST00000553653 RAPGEF2Q9Y4G8 1499 aa37.79■■■■□ 3.64
SLCO3A1-204ENST00000553653 DNAJC5BQ9UF47 199 aa37.78■■■■□ 3.64
SLCO3A1-204ENST00000553653 LAMC3Q9Y6N6 1575 aa37.74■■■■□ 3.63
SLCO3A1-204ENST00000553653 KIF27Q86VH2 1401 aa37.7■■■■□ 3.63
SLCO3A1-204ENST00000553653 PRXQ9BXM0 1461 aa37.7■■■■□ 3.62
SLCO3A1-204ENST00000553653 FGD5Q6ZNL6 1462 aa37.68■■■■□ 3.62
SLCO3A1-204ENST00000553653 ERICH3Q5RHP9 1530 aa37.64■■■■□ 3.62
SLCO3A1-204ENST00000553653 DNMBPQ6XZF7 1577 aa37.62■■■■□ 3.61
SLCO3A1-204ENST00000553653 TOPBP1Q92547 1522 aa37.54■■■■□ 3.6
SLCO3A1-204ENST00000553653 HRCP23327 699 aa37.54■■■■□ 3.6
SLCO3A1-204ENST00000553653 CUX2O14529 1486 aa37.53■■■■□ 3.6
SLCO3A1-204ENST00000553653 PPARGC1BQ86YN6 1023 aaKnown RBP37.48■■■■□ 3.59
SLCO3A1-204ENST00000553653 CLIP1P30622 1438 aa37.48■■■■□ 3.59
SLCO3A1-204ENST00000553653 POLA1P09884 1462 aaPredicted RBP37.42■■■■□ 3.58
SLCO3A1-204ENST00000553653 URB2Q14146 1524 aaKnown RBP37.41■■■■□ 3.58
SLCO3A1-204ENST00000553653 IGF1RP08069 1367 aa37.39■■■■□ 3.58
SLCO3A1-204ENST00000553653 KIF21AQ7Z4S6 1674 aa37.38■■■■□ 3.57
SLCO3A1-204ENST00000553653 PDS5BQ9NTI5 1447 aa37.37■■■■□ 3.57
SLCO3A1-204ENST00000553653 RAD54L2Q9Y4B4 1467 aa37.35■■■■□ 3.57
SLCO3A1-204ENST00000553653 ABCA10Q8WWZ4 1543 aa37.32■■■■□ 3.57
SLCO3A1-204ENST00000553653 VPS8Q8N3P4 1428 aa37.24■■■■□ 3.55
SLCO3A1-204ENST00000553653 WDR97A6NE52 1622 aa37.23■■■■□ 3.55
SLCO3A1-204ENST00000553653 CARMIL1Q5VZK9 1371 aa37.17■■■■□ 3.54
SLCO3A1-204ENST00000553653 RANGAP1P46060 587 aaPredicted RBP37.14■■■■□ 3.54
SLCO3A1-204ENST00000553653 ARAP1Q96P48 1450 aa37.13■■■■□ 3.53
SLCO3A1-204ENST00000553653 TTBK1Q5TCY1 1321 aaPredicted RBP37.03■■■■□ 3.52
SLCO3A1-204ENST00000553653 ABCA5Q8WWZ7 1642 aa37.02■■■■□ 3.52
SLCO3A1-204ENST00000553653 CUL7Q14999 1698 aa36.98■■■■□ 3.51
SLCO3A1-204ENST00000553653 ARHGAP35Q9NRY4 1499 aa36.98■■■■□ 3.51
SLCO3A1-204ENST00000553653 TARBP1Q13395 1621 aaKnown RBP36.96■■■■□ 3.51
SLCO3A1-204ENST00000553653 MRC2Q9UBG0 1479 aa36.93■■■■□ 3.5
SLCO3A1-204ENST00000553653 TDRD9Q8NDG6 1382 aaKnown RBP36.89■■■■□ 3.5
SLCO3A1-204ENST00000553653 GAPVD1Q14C86 1478 aa36.85■■■■□ 3.49
SLCO3A1-204ENST00000553653 WDR62O43379 1518 aa36.75■■■■□ 3.47
SLCO3A1-204ENST00000553653 CTTNBP2Q8WZ74 1663 aa36.73■■■■□ 3.47
SLCO3A1-204ENST00000553653 APLP2Q06481 763 aa36.71■■■■□ 3.47
SLCO3A1-204ENST00000553653 PBRM1Q86U86 1689 aa36.67■■■■□ 3.46
SLCO3A1-204ENST00000553653 AQRO60306 1485 aaKnown RBP eCLIP36.57■■■■□ 3.44
SLCO3A1-204ENST00000553653 THOC2Q8NI27 1593 aaKnown RBP36.56■■■■□ 3.44
SLCO3A1-204ENST00000553653 ZEB1P37275 1124 aaPredicted RBP36.56■■■■□ 3.44
SLCO3A1-204ENST00000553653 IFT140Q96RY7 1462 aa36.55■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms