RNA–Protein interactions for RNA: ENST00000553173.5

MCRS1-216, Transcript of microspherule protein 1, humanhuman

TSL 3

Gene MCRS1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCRS1-216ENST00000553173 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
MCRS1-216ENST00000553173 CCDC180Q9P1Z9 1646 aa28.37■■■□□ 2.13
MCRS1-216ENST00000553173 ABCC9O60706 1549 aa28■■■□□ 2.07
MCRS1-216ENST00000553173 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
MCRS1-216ENST00000553173 RB1CC1Q8TDY2 1594 aa26.79■■□□□ 1.88
MCRS1-216ENST00000553173 NACADO15069 1562 aa26.73■■□□□ 1.87
MCRS1-216ENST00000553173 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
MCRS1-216ENST00000553173 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
MCRS1-216ENST00000553173 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.81
MCRS1-216ENST00000553173 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
MCRS1-216ENST00000553173 UNC13AQ9UPW8 1703 aa26.22■■□□□ 1.79
MCRS1-216ENST00000553173 BICRAQ9NZM4 1560 aa26.03■■□□□ 1.76
MCRS1-216ENST00000553173 SCRIBQ14160 1630 aa26.03■■□□□ 1.76
MCRS1-216ENST00000553173 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
MCRS1-216ENST00000553173 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
MCRS1-216ENST00000553173 EIF4G1Q04637 1599 aaKnown RBP25.33■■□□□ 1.65
MCRS1-216ENST00000553173 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
MCRS1-216ENST00000553173 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
MCRS1-216ENST00000553173 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
MCRS1-216ENST00000553173 BAZ1AQ9NRL2 1556 aaPredicted RBP24.77■■□□□ 1.56
MCRS1-216ENST00000553173 ATAD2BQ9ULI0 1458 aa24.74■■□□□ 1.55
MCRS1-216ENST00000553173 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
MCRS1-216ENST00000553173 NCAPD3P42695 1498 aa24.7■■□□□ 1.54
MCRS1-216ENST00000553173 SMARCA2P51531 1590 aa24.65■■□□□ 1.54
MCRS1-216ENST00000553173 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
MCRS1-216ENST00000553173 HMGXB3Q12766 1538 aa24.52■■□□□ 1.52
MCRS1-216ENST00000553173 PEG3Q9GZU2 1588 aa24.52■■□□□ 1.52
MCRS1-216ENST00000553173 WIZO95785 1651 aa24.46■■□□□ 1.51
MCRS1-216ENST00000553173 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
MCRS1-216ENST00000553173 NESP48681 1621 aa24.23■■□□□ 1.47
MCRS1-216ENST00000553173 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
MCRS1-216ENST00000553173 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
MCRS1-216ENST00000553173 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
MCRS1-216ENST00000553173 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
MCRS1-216ENST00000553173 PDS5BQ9NTI5 1447 aa23.92■■□□□ 1.42
MCRS1-216ENST00000553173 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
MCRS1-216ENST00000553173 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
MCRS1-216ENST00000553173 KIF21AQ7Z4S6 1674 aa23.87■■□□□ 1.41
MCRS1-216ENST00000553173 CFTRP13569 1480 aa23.83■■□□□ 1.41
MCRS1-216ENST00000553173 CUX2O14529 1486 aa23.78■■□□□ 1.4
MCRS1-216ENST00000553173 THOC2Q8NI27 1593 aaKnown RBP23.76■■□□□ 1.39
MCRS1-216ENST00000553173 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
MCRS1-216ENST00000553173 CEP164Q9UPV0 1460 aa23.69■■□□□ 1.38
MCRS1-216ENST00000553173 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
MCRS1-216ENST00000553173 PRDM2Q13029 1718 aa23.58■■□□□ 1.37
MCRS1-216ENST00000553173 WDR62O43379 1518 aa23.56■■□□□ 1.36
MCRS1-216ENST00000553173 URB2Q14146 1524 aaKnown RBP23.52■■□□□ 1.36
MCRS1-216ENST00000553173 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
MCRS1-216ENST00000553173 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
MCRS1-216ENST00000553173 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
MCRS1-216ENST00000553173 DNAJC5Q9H3Z4 198 aa23.23■■□□□ 1.31
MCRS1-216ENST00000553173 IFT140Q96RY7 1462 aa23.19■■□□□ 1.3
MCRS1-216ENST00000553173 CUX1P39880 1505 aa23.18■■□□□ 1.3
MCRS1-216ENST00000553173 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
MCRS1-216ENST00000553173 POLA1P09884 1462 aaPredicted RBP23.15■■□□□ 1.3
MCRS1-216ENST00000553173 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
MCRS1-216ENST00000553173 SOGA1O94964 1423 aa23.1■■□□□ 1.29
MCRS1-216ENST00000553173 FGD5Q6ZNL6 1462 aa23.1■■□□□ 1.29
MCRS1-216ENST00000553173 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.29
MCRS1-216ENST00000553173 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.281e-7■■■■□ 19.8
MCRS1-216ENST00000553173 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
MCRS1-216ENST00000553173 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
MCRS1-216ENST00000553173 EIF4G3O43432 1585 aaKnown RBP22.99■■□□□ 1.27
MCRS1-216ENST00000553173 SYNJ1O43426 1573 aa22.95■■□□□ 1.26
MCRS1-216ENST00000553173 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
MCRS1-216ENST00000553173 OSCARQ8IYS5 282 aa22.91■■□□□ 1.26
MCRS1-216ENST00000553173 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
MCRS1-216ENST00000553173 FBLN2P98095 1184 aa22.86■■□□□ 1.25
MCRS1-216ENST00000553173 WDR97A6NE52 1622 aa22.84■■□□□ 1.25
MCRS1-216ENST00000553173 ABCA10Q8WWZ4 1543 aa22.83■■□□□ 1.25
MCRS1-216ENST00000553173 GAPVD1Q14C86 1478 aa22.8■■□□□ 1.24
MCRS1-216ENST00000553173 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
MCRS1-216ENST00000553173 GRIN2BQ13224 1484 aa22.78■■□□□ 1.24
MCRS1-216ENST00000553173 CHD1O14646 1710 aa22.74■■□□□ 1.23
MCRS1-216ENST00000553173 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
MCRS1-216ENST00000553173 CHMP7Q8WUX9 453 aaPredicted RBP22.72■■□□□ 1.23
MCRS1-216ENST00000553173 PBRM1Q86U86 1689 aa22.71■■□□□ 1.23
MCRS1-216ENST00000553173 MAGI1Q96QZ7 1491 aaPredicted RBP22.68■■□□□ 1.22
MCRS1-216ENST00000553173 SYNJ2O15056 1496 aa22.62■■□□□ 1.21
MCRS1-216ENST00000553173 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
MCRS1-216ENST00000553173 ERICH3Q5RHP9 1530 aa22.54■■□□□ 1.2
MCRS1-216ENST00000553173 ADAMTS12P58397 1594 aa22.53■■□□□ 1.2
MCRS1-216ENST00000553173 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
MCRS1-216ENST00000553173 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
MCRS1-216ENST00000553173 RIMBP3CA6NJZ7 1639 aa22.49■■□□□ 1.19
MCRS1-216ENST00000553173 RIMBP3BA6NNM3 1639 aa22.49■■□□□ 1.19
MCRS1-216ENST00000553173 RIMBP3Q9UFD9 1639 aa22.49■■□□□ 1.19
MCRS1-216ENST00000553173 IGF1RP08069 1367 aa22.49■■□□□ 1.19
MCRS1-216ENST00000553173 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
MCRS1-216ENST00000553173 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
MCRS1-216ENST00000553173 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
MCRS1-216ENST00000553173 RUSC2Q8N2Y8 1516 aa22.41■■□□□ 1.18
MCRS1-216ENST00000553173 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
MCRS1-216ENST00000553173 CEP170Q5SW79 1584 aa22.39■■□□□ 1.18
MCRS1-216ENST00000553173 NUP160Q12769 1436 aa22.38■■□□□ 1.17
MCRS1-216ENST00000553173 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
MCRS1-216ENST00000553173 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
MCRS1-216ENST00000553173 CUL7Q14999 1698 aa22.3■■□□□ 1.16
MCRS1-216ENST00000553173 JPH4Q96JJ6 628 aa22.25■■□□□ 1.15
MCRS1-216ENST00000553173 ERCC6L2Q5T890 1561 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms