RNA–Protein interactions for RNA: ENST00000553142.5

B4GALNT1-216, Transcript of beta-1,4-N-acetyl-galactosaminyltransferase 1, humanhuman

TSL 2

Gene B4GALNT1, Length 5,580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
B4GALNT1-216ENST00000553142 DCAF8L2P0C7V8 631 aa26.29■■□□□ 1.8
B4GALNT1-216ENST00000553142 NISCHQ9Y2I1 1504 aa25.97■■□□□ 1.75
B4GALNT1-216ENST00000553142 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
B4GALNT1-216ENST00000553142 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
B4GALNT1-216ENST00000553142 SHROOM4Q9ULL8 1493 aa24.61■■□□□ 1.53
B4GALNT1-216ENST00000553142 EHMT2Q96KQ7 1210 aa23.82■■□□□ 1.4
B4GALNT1-216ENST00000553142 ERICH6Q7L0X2 663 aa23.82■■□□□ 1.4
B4GALNT1-216ENST00000553142 CCER1Q8TC90 406 aaPredicted RBP23.54■■□□□ 1.36
B4GALNT1-216ENST00000553142 APLP2Q06481 763 aa23.48■■□□□ 1.35
B4GALNT1-216ENST00000553142 CENPBP07199 599 aaPredicted RBP23.34■■□□□ 1.33
B4GALNT1-216ENST00000553142 FAM9AQ8IZU1 332 aaPredicted RBP23.28■■□□□ 1.32
B4GALNT1-216ENST00000553142 MYT1Q01538 1121 aa23.22■■□□□ 1.31
B4GALNT1-216ENST00000553142 TTBK1Q5TCY1 1321 aaPredicted RBP23.12■■□□□ 1.29
B4GALNT1-216ENST00000553142 PCGF6Q9BYE7 350 aa23.06■■□□□ 1.28
B4GALNT1-216ENST00000553142 NEFLP07196 543 aa22.95■■□□□ 1.26
B4GALNT1-216ENST00000553142 TRIM41Q8WV44 630 aa22.95■■□□□ 1.26
B4GALNT1-216ENST00000553142 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
B4GALNT1-216ENST00000553142 ZEB1P37275 1124 aaPredicted RBP22.82■■□□□ 1.24
B4GALNT1-216ENST00000553142 YTHDC1Q96MU7 727 aaKnown RBP22.77■■□□□ 1.24
B4GALNT1-216ENST00000553142 ATP1B4Q9UN42 357 aaPredicted RBP22.68■■□□□ 1.22
B4GALNT1-216ENST00000553142 UBTFP17480 764 aaKnown RBP22.63■■□□□ 1.21
B4GALNT1-216ENST00000553142 DAXXQ9UER7 740 aaPredicted RBP22.56■■□□□ 1.2
B4GALNT1-216ENST00000553142 ABCC9O60706 1549 aa22.51■■□□□ 1.19
B4GALNT1-216ENST00000553142 PABPN1Q86U42 306 aaKnown RBP eCLIP22.23■■□□□ 1.15
B4GALNT1-216ENST00000553142 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.13
B4GALNT1-216ENST00000553142 RTL5Q5HYW3 569 aaPredicted RBP22.08■■□□□ 1.12
B4GALNT1-216ENST00000553142 POLR3GLQ9BT43 218 aa22.03■■□□□ 1.12
B4GALNT1-216ENST00000553142 ZNF316A6NFI3 1004 aaPredicted RBP21.99■■□□□ 1.11
B4GALNT1-216ENST00000553142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.98■■□□□ 1.11
B4GALNT1-216ENST00000553142 HNRNPUL2Q1KMD3 747 aaKnown RBP21.98■■□□□ 1.11
B4GALNT1-216ENST00000553142 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
B4GALNT1-216ENST00000553142 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
B4GALNT1-216ENST00000553142 CNGB1Q14028 1251 aaPredicted RBP21.85■■□□□ 1.09
B4GALNT1-216ENST00000553142 MYT1LQ9UL68 1186 aa21.84■■□□□ 1.09
B4GALNT1-216ENST00000553142 CLSPNQ9HAW4 1339 aa21.84■■□□□ 1.09
B4GALNT1-216ENST00000553142 ITGAEP38570 1179 aa21.82■■□□□ 1.08
B4GALNT1-216ENST00000553142 HRCP23327 699 aa21.81■■□□□ 1.08
B4GALNT1-216ENST00000553142 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
B4GALNT1-216ENST00000553142 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
B4GALNT1-216ENST00000553142 SLC4A1APQ9BWU0 796 aaKnown RBP21.6■■□□□ 1.05
B4GALNT1-216ENST00000553142 CCDC180Q9P1Z9 1646 aa21.55■■□□□ 1.04
B4GALNT1-216ENST00000553142 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
B4GALNT1-216ENST00000553142 FBLN2P98095 1184 aa21.41■■□□□ 1.02
B4GALNT1-216ENST00000553142 BCANQ96GW7 911 aa21.41■■□□□ 1.02
B4GALNT1-216ENST00000553142 FAM50AQ14320 339 aaKnown RBP21.38■■□□□ 1.01
B4GALNT1-216ENST00000553142 DIEXFQ68CQ4 756 aaKnown RBP21.38■■□□□ 1.01
B4GALNT1-216ENST00000553142 CDK11AQ9UQ88 783 aaPredicted RBP21.3■■□□□ 1
B4GALNT1-216ENST00000553142 ZBTB47Q9UFB7 747 aaPredicted RBP21.29■■□□□ 1
B4GALNT1-216ENST00000553142 GTF3C3Q9Y5Q9 886 aa21.21■□□□□ 0.99
B4GALNT1-216ENST00000553142 EIF5BO60841 1220 aaKnown RBP21.21■□□□□ 0.99
B4GALNT1-216ENST00000553142 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
B4GALNT1-216ENST00000553142 RB1CC1Q8TDY2 1594 aa21.15■□□□□ 0.98
B4GALNT1-216ENST00000553142 BCL11AQ9H165 835 aa21.14■□□□□ 0.97
B4GALNT1-216ENST00000553142 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
B4GALNT1-216ENST00000553142 CSRNP3Q8WYN3 585 aa21.1■□□□□ 0.97
B4GALNT1-216ENST00000553142 ARID3CA6NKF2 412 aa21.07■□□□□ 0.96
B4GALNT1-216ENST00000553142 CANXP27824 592 aaKnown RBP21.06■□□□□ 0.96
B4GALNT1-216ENST00000553142 ANP32AP39687 249 aaKnown RBP21.04■□□□□ 0.96
B4GALNT1-216ENST00000553142 NEUROD1Q13562 356 aa21.03■□□□□ 0.96
B4GALNT1-216ENST00000553142 ANP32CO43423 234 aa21.02■□□□□ 0.96
B4GALNT1-216ENST00000553142 GLIPR1L2Q4G1C9 344 aa20.99■□□□□ 0.95
B4GALNT1-216ENST00000553142 SLC24A1O60721 1099 aa20.98■□□□□ 0.95
B4GALNT1-216ENST00000553142 ANP32BQ92688 251 aaKnown RBP20.97■□□□□ 0.95
B4GALNT1-216ENST00000553142 NPM2Q86SE8 214 aaKnown RBP20.95■□□□□ 0.94
B4GALNT1-216ENST00000553142 NACADO15069 1562 aa20.91■□□□□ 0.94
B4GALNT1-216ENST00000553142 ZNF326Q5BKZ1 582 aaKnown RBP20.9■□□□□ 0.94
B4GALNT1-216ENST00000553142 ZNF777Q9ULD5 760 aaPredicted RBP20.86■□□□□ 0.93
B4GALNT1-216ENST00000553142 NEFMP07197 916 aa20.8■□□□□ 0.92
B4GALNT1-216ENST00000553142 HSP90AA1P07900 732 aaKnown RBP20.78■□□□□ 0.92
B4GALNT1-216ENST00000553142 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
B4GALNT1-216ENST00000553142 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
B4GALNT1-216ENST00000553142 BAZ1BQ9UIG0 1483 aaKnown RBP20.65■□□□□ 0.9
B4GALNT1-216ENST00000553142 NPM1P06748 294 aaKnown RBP eCLIP20.63■□□□□ 0.89
B4GALNT1-216ENST00000553142 UPF2Q9HAU5 1272 aaKnown RBP20.62■□□□□ 0.89
B4GALNT1-216ENST00000553142 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
B4GALNT1-216ENST00000553142 ARXQ96QS3 562 aa20.59■□□□□ 0.89
B4GALNT1-216ENST00000553142 FKBP8Q14318 412 aa20.56■□□□□ 0.88
B4GALNT1-216ENST00000553142 NBR1Q14596 966 aa20.56■□□□□ 0.88
B4GALNT1-216ENST00000553142 ESF1Q9H501 851 aaKnown RBP20.53■□□□□ 0.88
B4GALNT1-216ENST00000553142 DCAF1Q9Y4B6 1507 aa20.49■□□□□ 0.87
B4GALNT1-216ENST00000553142 BAZ1AQ9NRL2 1556 aaPredicted RBP20.45■□□□□ 0.86
B4GALNT1-216ENST00000553142 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
B4GALNT1-216ENST00000553142 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
B4GALNT1-216ENST00000553142 CHGAP10645 457 aaKnown RBP20.43■□□□□ 0.86
B4GALNT1-216ENST00000553142 PLPPR3Q6T4P5 718 aa20.42■□□□□ 0.86
B4GALNT1-216ENST00000553142 CLIP1P30622 1438 aa20.41■□□□□ 0.86
B4GALNT1-216ENST00000553142 MTUS2Q5JR59 1369 aa20.4■□□□□ 0.86
B4GALNT1-216ENST00000553142 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
B4GALNT1-216ENST00000553142 CDK11BP21127 795 aaKnown RBP20.4■□□□□ 0.86
B4GALNT1-216ENST00000553142 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
B4GALNT1-216ENST00000553142 TONSLQ96HA7 1378 aa20.37■□□□□ 0.85
B4GALNT1-216ENST00000553142 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
B4GALNT1-216ENST00000553142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.85
B4GALNT1-216ENST00000553142 GOLGA3Q08378 1498 aa20.36■□□□□ 0.85
B4GALNT1-216ENST00000553142 HNRNPUQ00839 825 aaKnown RBP eCLIP20.34■□□□□ 0.85
B4GALNT1-216ENST00000553142 EEA1Q15075 1411 aa20.34■□□□□ 0.85
B4GALNT1-216ENST00000553142 CCDC136Q96JN2 1154 aa20.31■□□□□ 0.84
B4GALNT1-216ENST00000553142 KIF27Q86VH2 1401 aa20.3■□□□□ 0.84
B4GALNT1-216ENST00000553142 TSPY4P0CV99 314 aa20.29■□□□□ 0.84
B4GALNT1-216ENST00000553142 TSPY10P0CW01 314 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms