RNA–Protein interactions for RNA: ENST00000552683.5

WDR90-222, Transcript of WD repeat domain 90, human

TSL 2

Gene WDR90, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR90-222	ENST00000552683	NISCH	Q9Y2I1	1504 aa		37.56	■■■■□ 3.6
WDR90-222	ENST00000552683	SHROOM4	Q9ULL8	1493 aa		32.31	■■■□□ 2.76
WDR90-222	ENST00000552683	SUPT5H	O00267	1087 aa	Known RBP	32.06	■■■□□ 2.72
WDR90-222	ENST00000552683	ZCCHC6	Q5VYS8	1495 aa	Known RBP	31.9	■■■□□ 2.7
WDR90-222	ENST00000552683	HRC	P23327	699 aa		31.75	■■■□□ 2.67
WDR90-222	ENST00000552683	CCDC180	Q9P1Z9	1646 aa		31.62	■■■□□ 2.65
WDR90-222	ENST00000552683	CHIC1	Q5VXU3	224 aa		31.59	■■■□□ 2.65
WDR90-222	ENST00000552683	MYO15B	Q96JP2	1530 aa		31.49	■■■□□ 2.63
WDR90-222	ENST00000552683	PCGF6	Q9BYE7	350 aa		31.19	■■■□□ 2.58
WDR90-222	ENST00000552683	DCAF1	Q9Y4B6	1507 aa		31.04	■■■□□ 2.56
WDR90-222	ENST00000552683	DCAF8L2	P0C7V8	631 aa		30.84	■■■□□ 2.53
WDR90-222	ENST00000552683	PPARGC1B	Q86YN6	1023 aa	Known RBP	30.78	■■■□□ 2.52
WDR90-222	ENST00000552683	LOC105371045	A0A1W2PR82	267 aa		30.59	■■■□□ 2.49
WDR90-222	ENST00000552683	TRIM26	Q12899	539 aa	Predicted RBP	30.59	■■■□□ 2.49
WDR90-222	ENST00000552683	ZEB1	P37275	1124 aa	Predicted RBP	30.31	■■■□□ 2.44
WDR90-222	ENST00000552683	ABCC9	O60706	1549 aa		30.17	■■■□□ 2.42
WDR90-222	ENST00000552683	PELP1	Q8IZL8	1130 aa	Known RBP	30.01	■■■□□ 2.4
WDR90-222	ENST00000552683	RSF1	Q96T23	1441 aa	Predicted RBP	29.97	■■■□□ 2.39
WDR90-222	ENST00000552683	TRIM41	Q8WV44	630 aa		29.92	■■■□□ 2.38
WDR90-222	ENST00000552683	RB1CC1	Q8TDY2	1594 aa		29.76	■■■□□ 2.35
WDR90-222	ENST00000552683	SCRIB	Q14160	1630 aa		29.62	■■■□□ 2.33
WDR90-222	ENST00000552683	SCAF1	Q9H7N4	1312 aa	Known RBP	29.57	■■■□□ 2.32
WDR90-222	ENST00000552683	FAM9A	Q8IZU1	332 aa	Predicted RBP	29.55	■■■□□ 2.32
WDR90-222	ENST00000552683	CECR2	Q9BXF3	1484 aa		29.19	■■■□□ 2.26
WDR90-222	ENST00000552683	MROH2B	Q7Z745	1585 aa		29.17	■■■□□ 2.26
WDR90-222	ENST00000552683	EHMT2	Q96KQ7	1210 aa		29.17	■■■□□ 2.26
WDR90-222	ENST00000552683	ACIN1	Q9UKV3	1341 aa	Known RBP	29.17	■■■□□ 2.26
WDR90-222	ENST00000552683	NACAD	O15069	1562 aa		29.14	■■■□□ 2.26
WDR90-222	ENST00000552683	CCER1	Q8TC90	406 aa	Predicted RBP	29.12	■■■□□ 2.25
WDR90-222	ENST00000552683	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	29.08	■■■□□ 2.25
WDR90-222	ENST00000552683	WIZ	O95785	1651 aa		29	■■■□□ 2.23
WDR90-222	ENST00000552683	NEUROD1	Q13562	356 aa		28.98	■■■□□ 2.23
WDR90-222	ENST00000552683	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.97	■■■□□ 2.23
WDR90-222	ENST00000552683	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	28.95	■■■□□ 2.23
WDR90-222	ENST00000552683	CENPB	P07199	599 aa	Predicted RBP	28.95	■■■□□ 2.22
WDR90-222	ENST00000552683	EIF4G1	Q04637	1599 aa	Known RBP	28.94	■■■□□ 2.22
WDR90-222	ENST00000552683	DIEXF	Q68CQ4	756 aa	Known RBP	28.94	■■■□□ 2.22
WDR90-222	ENST00000552683	MYT1	Q01538	1121 aa		28.78	■■■□□ 2.2
WDR90-222	ENST00000552683	GTF3C3	Q9Y5Q9	886 aa		28.77	■■■□□ 2.2
WDR90-222	ENST00000552683	TNIK	Q9UKE5	1360 aa		28.71	■■■□□ 2.19
WDR90-222	ENST00000552683	CEP162	Q5TB80	1403 aa		28.71	■■■□□ 2.19
WDR90-222	ENST00000552683	TOP2A	P11388	1531 aa	Known RBP	28.65	■■■□□ 2.18
WDR90-222	ENST00000552683	CCDC88B	A6NC98	1476 aa		28.64	■■■□□ 2.18
WDR90-222	ENST00000552683	EEA1	Q15075	1411 aa		28.64	■■■□□ 2.17
WDR90-222	ENST00000552683	ZNF316	A6NFI3	1004 aa	Predicted RBP	28.6	■■■□□ 2.17
WDR90-222	ENST00000552683	ABCC8	Q09428	1581 aa		28.56	■■■□□ 2.16
WDR90-222	ENST00000552683	CSRNP3	Q8WYN3	585 aa		28.51	■■■□□ 2.15
WDR90-222	ENST00000552683	SOGA1	O94964	1423 aa		28.5	■■■□□ 2.15
WDR90-222	ENST00000552683	SMARCA2	P51531	1590 aa		28.48	■■■□□ 2.15
WDR90-222	ENST00000552683	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.43	■■■□□ 2.14
WDR90-222	ENST00000552683	SMARCA4	P51532	1647 aa		28.42	■■■□□ 2.14
WDR90-222	ENST00000552683	UBTF	P17480	764 aa	Known RBP	28.38	■■■□□ 2.13
WDR90-222	ENST00000552683	GOLGA3	Q08378	1498 aa		28.38	■■■□□ 2.13
WDR90-222	ENST00000552683	RUSC2	Q8N2Y8	1516 aa		28.28	■■■□□ 2.12
WDR90-222	ENST00000552683	MIER1	Q8N108	512 aa		28.19	■■■□□ 2.1
WDR90-222	ENST00000552683	CEP164	Q9UPV0	1460 aa		28.16	■■■□□ 2.1
WDR90-222	ENST00000552683	YTHDC1	Q96MU7	727 aa	Known RBP	28.14	■■■□□ 2.09
WDR90-222	ENST00000552683	KIF21B	O75037	1637 aa		28.11	■■■□□ 2.09
WDR90-222	ENST00000552683	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.08	■■■□□ 2.09
WDR90-222	ENST00000552683	CLIP1	P30622	1438 aa		28.06	■■■□□ 2.08
WDR90-222	ENST00000552683	VPS8	Q8N3P4	1428 aa		28.05	■■■□□ 2.08
WDR90-222	ENST00000552683	BAZ1B	Q9UIG0	1483 aa	Known RBP	28	■■■□□ 2.07
WDR90-222	ENST00000552683	CLSPN	Q9HAW4	1339 aa		27.98	■■■□□ 2.07
WDR90-222	ENST00000552683	APLP2	Q06481	763 aa		27.97	■■■□□ 2.07
WDR90-222	ENST00000552683	PEG3	Q9GZU2	1588 aa		27.93	■■■□□ 2.06
WDR90-222	ENST00000552683	UNC13A	Q9UPW8	1703 aa		27.92	■■■□□ 2.06
WDR90-222	ENST00000552683	SYNJ1	O43426	1573 aa		27.88	■■■□□ 2.05
WDR90-222	ENST00000552683	RAPGEF2	Q9Y4G8	1499 aa		27.78	■■■□□ 2.04
WDR90-222	ENST00000552683	DHX57	Q6P158	1386 aa	Known RBP	27.72	■■■□□ 2.03
WDR90-222	ENST00000552683	BICRA	Q9NZM4	1560 aa		27.64	■■■□□ 2.02
WDR90-222	ENST00000552683	SUPT16H	Q9Y5B9	1047 aa	Known RBP	27.6	■■■□□ 2.01
WDR90-222	ENST00000552683	ATAD2B	Q9ULI0	1458 aa		27.59	■■■□□ 2.01
WDR90-222	ENST00000552683	ERICH3	Q5RHP9	1530 aa		27.58	■■■□□ 2.01
WDR90-222	ENST00000552683	TOP2B	Q02880	1626 aa		27.56	■■■□□ 2
WDR90-222	ENST00000552683	PABPN1	Q86U42	306 aa	Known RBP eCLIP	27.55	■■■□□ 2
WDR90-222	ENST00000552683	RRBP1	Q9P2E9	1410 aa	Known RBP	27.53	■■■□□ 2
WDR90-222	ENST00000552683	PRX	Q9BXM0	1461 aa		27.52	■■■□□ 2
WDR90-222	ENST00000552683	CUX2	O14529	1486 aa		27.51	■■□□□ 1.99
WDR90-222	ENST00000552683	ARAP1	Q96P48	1450 aa		27.49	■■□□□ 1.99
WDR90-222	ENST00000552683	RANGAP1	P46060	587 aa	Predicted RBP	27.47	■■□□□ 1.99
WDR90-222	ENST00000552683	BIVM-ERCC5	R4GMW8	1640 aa		27.43	■■□□□ 1.98
WDR90-222	ENST00000552683	KANK4	Q5T7N3	995 aa	Predicted RBP	27.43	■■□□□ 1.98
WDR90-222	ENST00000552683	CCNB3	Q8WWL7	1395 aa		27.34	■■□□□ 1.97
WDR90-222	ENST00000552683	TSHZ2	Q9NRE2	1034 aa		27.32	■■□□□ 1.96
WDR90-222	ENST00000552683	KIF27	Q86VH2	1401 aa		27.25	■■□□□ 1.95
WDR90-222	ENST00000552683	ANP32E	Q9BTT0	268 aa		27.17	■■□□□ 1.94
WDR90-222	ENST00000552683	ARHGAP35	Q9NRY4	1499 aa		27.17	■■□□□ 1.94
WDR90-222	ENST00000552683	RAB3GAP2	Q9H2M9	1393 aa		27.14	■■□□□ 1.94
WDR90-222	ENST00000552683	MAP3K1	Q13233	1512 aa		27.14	■■□□□ 1.93
WDR90-222	ENST00000552683	CUX1	P39880	1505 aa		27.12	■■□□□ 1.93
WDR90-222	ENST00000552683	MAPKBP1	O60336	1514 aa		27.12	■■□□□ 1.93
WDR90-222	ENST00000552683	TIMELESS	Q9UNS1	1208 aa		27.07	■■□□□ 1.92
WDR90-222	ENST00000552683	SETD5	Q9C0A6	1442 aa		27.06	■■□□□ 1.92
WDR90-222	ENST00000552683	KCNH8	Q96L42	1107 aa		27.06	■■□□□ 1.92
WDR90-222	ENST00000552683	ITGAE	P38570	1179 aa		27.04	■■□□□ 1.92
WDR90-222	ENST00000552683	NCAPD3	P42695	1498 aa		27	■■□□□ 1.91
WDR90-222	ENST00000552683	HMGXB3	Q12766	1538 aa		27	■■□□□ 1.91
WDR90-222	ENST00000552683	TIAM1	Q13009	1591 aa		26.99	■■□□□ 1.91
WDR90-222	ENST00000552683	PPP1R15A	O75807	674 aa	Predicted RBP	26.95	■■□□□ 1.91
WDR90-222	ENST00000552683	FKBP8	Q14318	412 aa		26.95	■■□□□ 1.9

Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms