RNA–Protein interactions for RNA: ENST00000552562.1

CBX5-205, Transcript of chromobox 5, humanhuman

TSL 4

Gene CBX5, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-205ENST00000552562 AEBP2Q6ZN18 517 aaPredicted RBP21.66■■□□□ 1.06
CBX5-205ENST00000552562 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
CBX5-205ENST00000552562 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
CBX5-205ENST00000552562 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
CBX5-205ENST00000552562 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
CBX5-205ENST00000552562 FOXD1Q16676 465 aa17.3■□□□□ 0.36
CBX5-205ENST00000552562 POTEDQ86YR6 584 aa16.65■□□□□ 0.26
CBX5-205ENST00000552562 CCDC180Q9P1Z9 1646 aa16.54■□□□□ 0.24
CBX5-205ENST00000552562 MSH5O43196 834 aa16.3■□□□□ 0.2
CBX5-205ENST00000552562 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
CBX5-205ENST00000552562 ABCC9O60706 1549 aa16.12■□□□□ 0.17
CBX5-205ENST00000552562 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
CBX5-205ENST00000552562 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
CBX5-205ENST00000552562 ADRA2BP18089 450 aa15.94■□□□□ 0.14
CBX5-205ENST00000552562 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
CBX5-205ENST00000552562 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
CBX5-205ENST00000552562 NACADO15069 1562 aa15.55■□□□□ 0.08
CBX5-205ENST00000552562 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
CBX5-205ENST00000552562 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
CBX5-205ENST00000552562 MYO15BQ96JP2 1530 aa15.51■□□□□ 0.07
CBX5-205ENST00000552562 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
CBX5-205ENST00000552562 PABPN1Q86U42 306 aaKnown RBP eCLIP15.16■□□□□ 0.02
CBX5-205ENST00000552562 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
CBX5-205ENST00000552562 UNC13AQ9UPW8 1703 aa15.09■□□□□ 0.01
CBX5-205ENST00000552562 BICRAQ9NZM4 1560 aa15.06■□□□□ 0
CBX5-205ENST00000552562 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
CBX5-205ENST00000552562 MAPK8IP2Q13387 824 aaPredicted RBP14.69□□□□□ -0.06
CBX5-205ENST00000552562 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
CBX5-205ENST00000552562 EIF4G1Q04637 1599 aaKnown RBP14.65□□□□□ -0.06
CBX5-205ENST00000552562 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
CBX5-205ENST00000552562 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
CBX5-205ENST00000552562 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
CBX5-205ENST00000552562 MROH2BQ7Z745 1585 aa14.54□□□□□ -0.08
CBX5-205ENST00000552562 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
CBX5-205ENST00000552562 CC2D2AQ9P2K1 1620 aa14.53□□□□□ -0.08
CBX5-205ENST00000552562 RSF1Q96T23 1441 aaPredicted RBP14.47□□□□□ -0.09
CBX5-205ENST00000552562 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
CBX5-205ENST00000552562 SMARCA2P51531 1590 aa14.39□□□□□ -0.11
CBX5-205ENST00000552562 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
CBX5-205ENST00000552562 WIZO95785 1651 aa14.36□□□□□ -0.11
CBX5-205ENST00000552562 PEG3Q9GZU2 1588 aa14.36□□□□□ -0.11
CBX5-205ENST00000552562 SUPT5HO00267 1087 aaKnown RBP14.35□□□□□ -0.11
CBX5-205ENST00000552562 BAZ1BQ9UIG0 1483 aaKnown RBP14.33□□□□□ -0.12
CBX5-205ENST00000552562 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
CBX5-205ENST00000552562 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
CBX5-205ENST00000552562 TOP2AP11388 1531 aaKnown RBP14.22□□□□□ -0.13
CBX5-205ENST00000552562 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
CBX5-205ENST00000552562 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
CBX5-205ENST00000552562 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
CBX5-205ENST00000552562 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
CBX5-205ENST00000552562 NESP48681 1621 aa14.01□□□□□ -0.17
CBX5-205ENST00000552562 CADPSQ9ULU8 1353 aa14□□□□□ -0.17
CBX5-205ENST00000552562 CNKSR2Q8WXI2 1034 aa13.99□□□□□ -0.17
CBX5-205ENST00000552562 CFTRP13569 1480 aa13.94□□□□□ -0.18
CBX5-205ENST00000552562 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
CBX5-205ENST00000552562 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
CBX5-205ENST00000552562 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
CBX5-205ENST00000552562 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
CBX5-205ENST00000552562 ERCC6Q03468 1493 aa13.86□□□□□ -0.19
CBX5-205ENST00000552562 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
CBX5-205ENST00000552562 CEP164Q9UPV0 1460 aa13.78□□□□□ -0.2
CBX5-205ENST00000552562 KIF21AQ7Z4S6 1674 aa13.75□□□□□ -0.21
CBX5-205ENST00000552562 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
CBX5-205ENST00000552562 PRDM2Q13029 1718 aa13.71□□□□□ -0.21
CBX5-205ENST00000552562 THOC2Q8NI27 1593 aaKnown RBP13.68□□□□□ -0.22
CBX5-205ENST00000552562 URB2Q14146 1524 aaKnown RBP13.68□□□□□ -0.22
CBX5-205ENST00000552562 ABCC8Q09428 1581 aa13.66□□□□□ -0.22
CBX5-205ENST00000552562 WDR62O43379 1518 aa13.64□□□□□ -0.23
CBX5-205ENST00000552562 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
CBX5-205ENST00000552562 TOPBP1Q92547 1522 aa13.63□□□□□ -0.23
CBX5-205ENST00000552562 WRNQ14191 1432 aaPredicted RBP eCLIP13.63□□□□□ -0.23
CBX5-205ENST00000552562 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
CBX5-205ENST00000552562 CUX1P39880 1505 aa13.62□□□□□ -0.23
CBX5-205ENST00000552562 DNMBPQ6XZF7 1577 aa13.61□□□□□ -0.23
CBX5-205ENST00000552562 CUX2O14529 1486 aa13.57□□□□□ -0.24
CBX5-205ENST00000552562 SYNJ1O43426 1573 aa13.57□□□□□ -0.24
CBX5-205ENST00000552562 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
CBX5-205ENST00000552562 POLA1P09884 1462 aaPredicted RBP13.54□□□□□ -0.24
CBX5-205ENST00000552562 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
CBX5-205ENST00000552562 TOP2BQ02880 1626 aa13.52□□□□□ -0.25
CBX5-205ENST00000552562 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
CBX5-205ENST00000552562 SOGA1O94964 1423 aa13.51□□□□□ -0.25
CBX5-205ENST00000552562 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
CBX5-205ENST00000552562 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
CBX5-205ENST00000552562 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
CBX5-205ENST00000552562 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
CBX5-205ENST00000552562 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
CBX5-205ENST00000552562 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
CBX5-205ENST00000552562 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.265e-7■■■■□ 19.7
CBX5-205ENST00000552562 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
CBX5-205ENST00000552562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.273e-8■■□□□ 13.8
CBX5-205ENST00000552562 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
CBX5-205ENST00000552562 WDR97A6NE52 1622 aa13.34□□□□□ -0.27
CBX5-205ENST00000552562 GAPVD1Q14C86 1478 aa13.34□□□□□ -0.27
CBX5-205ENST00000552562 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
CBX5-205ENST00000552562 RUSC2Q8N2Y8 1516 aa13.32□□□□□ -0.28
CBX5-205ENST00000552562 ABCA5Q8WWZ7 1642 aa13.3□□□□□ -0.28
CBX5-205ENST00000552562 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
CBX5-205ENST00000552562 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
CBX5-205ENST00000552562 SNAPC4Q5SXM2 1469 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms