RNA–Protein interactions for RNA: ENST00000552177.1

ACAD10-222, Transcript of acyl-CoA dehydrogenase family member 10, human

TSL 3

Gene ACAD10, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACAD10-222	ENST00000552177	NISCH	Q9Y2I1	1504 aa		39.75	■■■■□ 3.95
ACAD10-222	ENST00000552177	CCDC180	Q9P1Z9	1646 aa		35.25	■■■■□ 3.23
ACAD10-222	ENST00000552177	ABCC9	O60706	1549 aa		35.1	■■■■□ 3.21
ACAD10-222	ENST00000552177	DCAF8L2	P0C7V8	631 aa		33.66	■■■□□ 2.98
ACAD10-222	ENST00000552177	RB1CC1	Q8TDY2	1594 aa		33.45	■■■□□ 2.95
ACAD10-222	ENST00000552177	NACAD	O15069	1562 aa		33.34	■■■□□ 2.93
ACAD10-222	ENST00000552177	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.03	■■■□□ 2.88
ACAD10-222	ENST00000552177	MYO15B	Q96JP2	1530 aa		32.98	■■■□□ 2.87
ACAD10-222	ENST00000552177	PABPN1	Q86U42	306 aa	Known RBP eCLIP	32.89	■■■□□ 2.86
ACAD10-222	ENST00000552177	DCAF1	Q9Y4B6	1507 aa		32.76	■■■□□ 2.83
ACAD10-222	ENST00000552177	DNAJC5B	Q9UF47	199 aa		32.57	■■■□□ 2.8
ACAD10-222	ENST00000552177	UNC13A	Q9UPW8	1703 aa		32.53	■■■□□ 2.8
ACAD10-222	ENST00000552177	BICRA	Q9NZM4	1560 aa		32.46	■■■□□ 2.79
ACAD10-222	ENST00000552177	SCRIB	Q14160	1630 aa		32.37	■■■□□ 2.77
ACAD10-222	ENST00000552177	SHROOM4	Q9ULL8	1493 aa		31.98	■■■□□ 2.71
ACAD10-222	ENST00000552177	EIF4G1	Q04637	1599 aa	Known RBP	31.64	■■■□□ 2.66
ACAD10-222	ENST00000552177	CC2D2A	Q9P2K1	1620 aa		31.6	■■■□□ 2.65
ACAD10-222	ENST00000552177	CECR2	Q9BXF3	1484 aa		31.52	■■■□□ 2.64
ACAD10-222	ENST00000552177	ATAD2B	Q9ULI0	1458 aa		30.85	■■■□□ 2.53
ACAD10-222	ENST00000552177	SMARCA4	P51532	1647 aa		30.84	■■■□□ 2.53
ACAD10-222	ENST00000552177	NCAPD3	P42695	1498 aa		30.84	■■■□□ 2.53
ACAD10-222	ENST00000552177	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.79	■■■□□ 2.52
ACAD10-222	ENST00000552177	SMARCA2	P51531	1590 aa		30.7	■■■□□ 2.5
ACAD10-222	ENST00000552177	MROH2B	Q7Z745	1585 aa		30.69	■■■□□ 2.5
ACAD10-222	ENST00000552177	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.57	■■■□□ 2.48
ACAD10-222	ENST00000552177	HMGXB3	Q12766	1538 aa		30.57	■■■□□ 2.48
ACAD10-222	ENST00000552177	PEG3	Q9GZU2	1588 aa		30.48	■■■□□ 2.47
ACAD10-222	ENST00000552177	WIZ	O95785	1651 aa		30.28	■■■□□ 2.44
ACAD10-222	ENST00000552177	NES	P48681	1621 aa		30.27	■■■□□ 2.44
ACAD10-222	ENST00000552177	RSF1	Q96T23	1441 aa	Predicted RBP	30.27	■■■□□ 2.44
ACAD10-222	ENST00000552177	ERCC6	Q03468	1493 aa		30.25	■■■□□ 2.43
ACAD10-222	ENST00000552177	CADPS	Q9ULU8	1353 aa		30	■■■□□ 2.39
ACAD10-222	ENST00000552177	LAMC3	Q9Y6N6	1575 aa		29.98	■■■□□ 2.39
ACAD10-222	ENST00000552177	TOP2A	P11388	1531 aa	Known RBP	29.92	■■■□□ 2.38
ACAD10-222	ENST00000552177	PDS5B	Q9NTI5	1447 aa		29.91	■■■□□ 2.38
ACAD10-222	ENST00000552177	CUX2	O14529	1486 aa		29.91	■■■□□ 2.38
ACAD10-222	ENST00000552177	KIF21A	Q7Z4S6	1674 aa		29.7	■■■□□ 2.35
ACAD10-222	ENST00000552177	THOC2	Q8NI27	1593 aa	Known RBP	29.69	■■■□□ 2.34
ACAD10-222	ENST00000552177	CFTR	P13569	1480 aa		29.69	■■■□□ 2.34
ACAD10-222	ENST00000552177	CCDC88B	A6NC98	1476 aa		29.68	■■■□□ 2.34
ACAD10-222	ENST00000552177	FANCD2	Q9BXW9	1451 aa		29.63	■■■□□ 2.33
ACAD10-222	ENST00000552177	MRC2	Q9UBG0	1479 aa		29.61	■■■□□ 2.33
ACAD10-222	ENST00000552177	CEP164	Q9UPV0	1460 aa		29.58	■■■□□ 2.33
ACAD10-222	ENST00000552177	SUPT5H	O00267	1087 aa	Known RBP	29.5	■■■□□ 2.31
ACAD10-222	ENST00000552177	DNAJC5	Q9H3Z4	198 aa		29.47	■■■□□ 2.31
ACAD10-222	ENST00000552177	WDR62	O43379	1518 aa		29.45	■■■□□ 2.3
ACAD10-222	ENST00000552177	URB2	Q14146	1524 aa	Known RBP	29.34	■■■□□ 2.29
ACAD10-222	ENST00000552177	PRDM2	Q13029	1718 aa		29.15	■■■□□ 2.26
ACAD10-222	ENST00000552177	TOPBP1	Q92547	1522 aa		29.1	■■■□□ 2.25
ACAD10-222	ENST00000552177	ABCC8	Q09428	1581 aa		29.01	■■■□□ 2.24
ACAD10-222	ENST00000552177	IFT140	Q96RY7	1462 aa		28.98	■■■□□ 2.23
ACAD10-222	ENST00000552177	DNMBP	Q6XZF7	1577 aa		28.97	■■■□□ 2.23
ACAD10-222	ENST00000552177	ZNF608	Q9ULD9	1512 aa	Predicted RBP	28.94	■■■□□ 2.22
ACAD10-222	ENST00000552177	POLA1	P09884	1462 aa	Predicted RBP	28.84	■■■□□ 2.21
ACAD10-222	ENST00000552177	RAD54L2	Q9Y4B4	1467 aa		28.81	■■■□□ 2.2
ACAD10-222	ENST00000552177	OSCAR	Q8IYS5	282 aa		28.79	■■■□□ 2.2
ACAD10-222	ENST00000552177	CUX1	P39880	1505 aa		28.79	■■■□□ 2.2
ACAD10-222	ENST00000552177	AQR	O60306	1485 aa	Known RBP eCLIP	28.78	■■■□□ 2.2
ACAD10-222	ENST00000552177	SOGA1	O94964	1423 aa		28.78	■■■□□ 2.2
ACAD10-222	ENST00000552177	FGD5	Q6ZNL6	1462 aa		28.75	■■■□□ 2.19
ACAD10-222	ENST00000552177	TDRD9	Q8NDG6	1382 aa	Known RBP	28.72	■■■□□ 2.19
ACAD10-222	ENST00000552177	TARBP1	Q13395	1621 aa	Known RBP	28.71	■■■□□ 2.19
ACAD10-222	ENST00000552177	EIF4G3	O43432	1585 aa	Known RBP	28.67	■■■□□ 2.18
ACAD10-222	ENST00000552177	FBLN2	P98095	1184 aa		28.61	■■■□□ 2.17
ACAD10-222	ENST00000552177	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.53	■■■□□ 2.16
ACAD10-222	ENST00000552177	TRIM41	Q8WV44	630 aa		28.52	■■■□□ 2.16
ACAD10-222	ENST00000552177	SNAPC4	Q5SXM2	1469 aa		28.45	■■■□□ 2.14
ACAD10-222	ENST00000552177	SYNJ1	O43426	1573 aa		28.41	■■■□□ 2.14
ACAD10-222	ENST00000552177	GRIN2B	Q13224	1484 aa		28.41	■■■□□ 2.14
ACAD10-222	ENST00000552177	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.41	■■■□□ 2.14
ACAD10-222	ENST00000552177	ABCA10	Q8WWZ4	1543 aa		28.41	■■■□□ 2.14
ACAD10-222	ENST00000552177	GAPVD1	Q14C86	1478 aa		28.4	■■■□□ 2.14
ACAD10-222	ENST00000552177	TOP2B	Q02880	1626 aa		28.37	■■■□□ 2.13
ACAD10-222	ENST00000552177	WDR97	A6NE52	1622 aa		28.36	■■■□□ 2.13
ACAD10-222	ENST00000552177	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.32	■■■□□ 2.12
ACAD10-222	ENST00000552177	BIVM-ERCC5	R4GMW8	1640 aa		28.32	■■■□□ 2.12
ACAD10-222	ENST00000552177	CHD1	O14646	1710 aa		28.31	■■■□□ 2.12
ACAD10-222	ENST00000552177	SYNJ2	O15056	1496 aa		28.25	■■■□□ 2.11
ACAD10-222	ENST00000552177	ABCA5	Q8WWZ7	1642 aa		28.24	■■■□□ 2.11
ACAD10-222	ENST00000552177	ARHGEF11	O15085	1522 aa		28.2	■■■□□ 2.1
ACAD10-222	ENST00000552177	RIMBP3C	A6NJZ7	1639 aa		28.19	■■■□□ 2.1
ACAD10-222	ENST00000552177	RIMBP3B	A6NNM3	1639 aa		28.19	■■■□□ 2.1
ACAD10-222	ENST00000552177	RIMBP3	Q9UFD9	1639 aa		28.19	■■■□□ 2.1
ACAD10-222	ENST00000552177	PBRM1	Q86U86	1689 aa		28.17	■■■□□ 2.1
ACAD10-222	ENST00000552177	CYB5RL	Q6IPT4	315 aa		28.15	■■■□□ 2.1
ACAD10-222	ENST00000552177	CLASP1	Q7Z460	1538 aa		28.07	■■■□□ 2.08
ACAD10-222	ENST00000552177	FHAD1	B1AJZ9	1412 aa		28.06	■■■□□ 2.08
ACAD10-222	ENST00000552177	GRIN2A	Q12879	1464 aa		28.04	■■■□□ 2.08
ACAD10-222	ENST00000552177	ADAMTS12	P58397	1594 aa		28.03	■■■□□ 2.08
ACAD10-222	ENST00000552177	ERICH3	Q5RHP9	1530 aa		28.02	■■■□□ 2.08
ACAD10-222	ENST00000552177	ARAP1	Q96P48	1450 aa		27.99	■■■□□ 2.07
ACAD10-222	ENST00000552177	KIF27	Q86VH2	1401 aa		27.96	■■■□□ 2.07
ACAD10-222	ENST00000552177	IGF1R	P08069	1367 aa		27.94	■■■□□ 2.06
ACAD10-222	ENST00000552177	NUP160	Q12769	1436 aa		27.92	■■■□□ 2.06
ACAD10-222	ENST00000552177	CEP170	Q5SW79	1584 aa		27.89	■■■□□ 2.05
ACAD10-222	ENST00000552177	JPH4	Q96JJ6	628 aa		27.77	■■■□□ 2.04
ACAD10-222	ENST00000552177	CARMIL1	Q5VZK9	1371 aa		27.76	■■■□□ 2.03
ACAD10-222	ENST00000552177	ERCC6L2	Q5T890	1561 aa		27.76	■■■□□ 2.03
ACAD10-222	ENST00000552177	PRG4	Q92954	1404 aa	Predicted RBP	27.7	■■■□□ 2.03
ACAD10-222	ENST00000552177	TRH	P20396	242 aa	Predicted RBP	27.7	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms