RNA–Protein interactions for RNA: ENST00000551617.1

ACTR6-209, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 5 BASIC

Gene ACTR6, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-209ENST00000551617 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
ACTR6-209ENST00000551617 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
ACTR6-209ENST00000551617 SENP3Q9H4L4 574 aaPredicted RBP19.48■□□□□ 0.71
ACTR6-209ENST00000551617 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
ACTR6-209ENST00000551617 FOXD1Q16676 465 aa18.1■□□□□ 0.49
ACTR6-209ENST00000551617 NISCHQ9Y2I1 1504 aa17.76■□□□□ 0.43
ACTR6-209ENST00000551617 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
ACTR6-209ENST00000551617 MSH5O43196 834 aa16.99■□□□□ 0.31
ACTR6-209ENST00000551617 PIAS4Q8N2W9 510 aaPredicted RBP16.96■□□□□ 0.3
ACTR6-209ENST00000551617 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
ACTR6-209ENST00000551617 ADRA2BP18089 450 aa16.89■□□□□ 0.29
ACTR6-209ENST00000551617 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
ACTR6-209ENST00000551617 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
ACTR6-209ENST00000551617 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
ACTR6-209ENST00000551617 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
ACTR6-209ENST00000551617 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
ACTR6-209ENST00000551617 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
ACTR6-209ENST00000551617 ZCCHC6Q5VYS8 1495 aaKnown RBP14.96□□□□□ -0.01
ACTR6-209ENST00000551617 CNKSR2Q8WXI2 1034 aa14.94□□□□□ -0.02
ACTR6-209ENST00000551617 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
ACTR6-209ENST00000551617 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
ACTR6-209ENST00000551617 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
ACTR6-209ENST00000551617 DCAF1Q9Y4B6 1507 aa14.73□□□□□ -0.05
ACTR6-209ENST00000551617 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
ACTR6-209ENST00000551617 SHROOM4Q9ULL8 1493 aa14.57□□□□□ -0.08
ACTR6-209ENST00000551617 DCAF8L2P0C7V8 631 aa14.57□□□□□ -0.08
ACTR6-209ENST00000551617 CACNB1Q02641 598 aaPredicted RBP14.54□□□□□ -0.08
ACTR6-209ENST00000551617 MYO15BQ96JP2 1530 aa14.49□□□□□ -0.09
ACTR6-209ENST00000551617 RNF39Q9H2S5 420 aa14.46□□□□□ -0.1
ACTR6-209ENST00000551617 NPM3O75607 178 aaKnown RBP14.42□□□□□ -0.1
ACTR6-209ENST00000551617 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
ACTR6-209ENST00000551617 NACADO15069 1562 aa14.35□□□□□ -0.11
ACTR6-209ENST00000551617 ABCC9O60706 1549 aa14.32□□□□□ -0.12
ACTR6-209ENST00000551617 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
ACTR6-209ENST00000551617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.2□□□□□ -0.142e-7■■□□□ 12.6
ACTR6-209ENST00000551617 SCRIBQ14160 1630 aa14.2□□□□□ -0.14
ACTR6-209ENST00000551617 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
ACTR6-209ENST00000551617 KCNA4P22459 653 aa14.17□□□□□ -0.14
ACTR6-209ENST00000551617 SUPT5HO00267 1087 aaKnown RBP14.15□□□□□ -0.14
ACTR6-209ENST00000551617 UNC13AQ9UPW8 1703 aa13.88□□□□□ -0.19
ACTR6-209ENST00000551617 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
ACTR6-209ENST00000551617 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
ACTR6-209ENST00000551617 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
ACTR6-209ENST00000551617 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
ACTR6-209ENST00000551617 CECR2Q9BXF3 1484 aa13.7□□□□□ -0.22
ACTR6-209ENST00000551617 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
ACTR6-209ENST00000551617 CAPN15O75808 1086 aa13.67□□□□□ -0.22
ACTR6-209ENST00000551617 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
ACTR6-209ENST00000551617 BICRAQ9NZM4 1560 aa13.64□□□□□ -0.23
ACTR6-209ENST00000551617 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
ACTR6-209ENST00000551617 WIZO95785 1651 aa13.63□□□□□ -0.23
ACTR6-209ENST00000551617 APLP2Q06481 763 aa13.59□□□□□ -0.23
ACTR6-209ENST00000551617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
ACTR6-209ENST00000551617 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
ACTR6-209ENST00000551617 DSG3P32926 999 aa13.55□□□□□ -0.24
ACTR6-209ENST00000551617 TOP2AP11388 1531 aaKnown RBP13.53□□□□□ -0.24
ACTR6-209ENST00000551617 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
ACTR6-209ENST00000551617 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
ACTR6-209ENST00000551617 PEG3Q9GZU2 1588 aa13.46□□□□□ -0.25
ACTR6-209ENST00000551617 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
ACTR6-209ENST00000551617 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
ACTR6-209ENST00000551617 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
ACTR6-209ENST00000551617 SMARCA2P51531 1590 aa13.4□□□□□ -0.26
ACTR6-209ENST00000551617 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
ACTR6-209ENST00000551617 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
ACTR6-209ENST00000551617 EIF4G1Q04637 1599 aaKnown RBP13.34□□□□□ -0.27
ACTR6-209ENST00000551617 CCDC88BA6NC98 1476 aa13.33□□□□□ -0.28
ACTR6-209ENST00000551617 ABCB7O75027 752 aa13.33□□□□□ -0.28
ACTR6-209ENST00000551617 BAZ1BQ9UIG0 1483 aaKnown RBP13.31□□□□□ -0.28
ACTR6-209ENST00000551617 ATAD2BQ9ULI0 1458 aa13.31□□□□□ -0.28
ACTR6-209ENST00000551617 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
ACTR6-209ENST00000551617 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
ACTR6-209ENST00000551617 NCAPD3P42695 1498 aa13.17□□□□□ -0.3
ACTR6-209ENST00000551617 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
ACTR6-209ENST00000551617 POLA2Q14181 598 aa13.09□□□□□ -0.31
ACTR6-209ENST00000551617 LOC105371045A0A1W2PR82 267 aa13.08□□□□□ -0.32
ACTR6-209ENST00000551617 EEA1Q15075 1411 aa13.06□□□□□ -0.32
ACTR6-209ENST00000551617 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
ACTR6-209ENST00000551617 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
ACTR6-209ENST00000551617 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
ACTR6-209ENST00000551617 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
ACTR6-209ENST00000551617 ZBTB22O15209 634 aa12.99□□□□□ -0.33
ACTR6-209ENST00000551617 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
ACTR6-209ENST00000551617 ATF5Q9Y2D1 282 aaPredicted RBP12.99□□□□□ -0.33
ACTR6-209ENST00000551617 SYNJ1O43426 1573 aa12.97□□□□□ -0.33
ACTR6-209ENST00000551617 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
ACTR6-209ENST00000551617 BIVM-ERCC5R4GMW8 1640 aa12.95□□□□□ -0.34
ACTR6-209ENST00000551617 CFTRP13569 1480 aa12.94□□□□□ -0.34
ACTR6-209ENST00000551617 POTEHQ6S545 545 aa12.92□□□□□ -0.34
ACTR6-209ENST00000551617 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
ACTR6-209ENST00000551617 SOGA1O94964 1423 aa12.88□□□□□ -0.35
ACTR6-209ENST00000551617 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
ACTR6-209ENST00000551617 KIF21BO75037 1637 aa12.86□□□□□ -0.35
ACTR6-209ENST00000551617 GOLGA3Q08378 1498 aa12.85□□□□□ -0.35
ACTR6-209ENST00000551617 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
ACTR6-209ENST00000551617 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
ACTR6-209ENST00000551617 CEP164Q9UPV0 1460 aa12.84□□□□□ -0.35
ACTR6-209ENST00000551617 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
ACTR6-209ENST00000551617 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
ACTR6-209ENST00000551617 CUX1P39880 1505 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms