RNA–Protein interactions for RNA: ENST00000550994.1

HNRNPA1-210, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 4

Gene HNRNPA1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-210ENST00000550994 AEBP2Q6ZN18 517 aaPredicted RBP26.02■■□□□ 1.76
HNRNPA1-210ENST00000550994 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
HNRNPA1-210ENST00000550994 SENP3Q9H4L4 574 aaPredicted RBP21.94■■□□□ 1.1
HNRNPA1-210ENST00000550994 PHF23Q9BUL5 403 aaPredicted RBP21.79■■□□□ 1.08
HNRNPA1-210ENST00000550994 FOXD1Q16676 465 aa20.58■□□□□ 0.89
HNRNPA1-210ENST00000550994 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
HNRNPA1-210ENST00000550994 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
HNRNPA1-210ENST00000550994 ADRA2BP18089 450 aa19.31■□□□□ 0.68
HNRNPA1-210ENST00000550994 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
HNRNPA1-210ENST00000550994 MSH5O43196 834 aa19.03■□□□□ 0.64
HNRNPA1-210ENST00000550994 POTEDQ86YR6 584 aa18.49■□□□□ 0.55
HNRNPA1-210ENST00000550994 NISCHQ9Y2I1 1504 aa18.36■□□□□ 0.53
HNRNPA1-210ENST00000550994 MAPK8IP2Q13387 824 aaPredicted RBP17.73■□□□□ 0.43
HNRNPA1-210ENST00000550994 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
HNRNPA1-210ENST00000550994 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
HNRNPA1-210ENST00000550994 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
HNRNPA1-210ENST00000550994 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
HNRNPA1-210ENST00000550994 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
HNRNPA1-210ENST00000550994 ABCC9O60706 1549 aa16.8■□□□□ 0.28
HNRNPA1-210ENST00000550994 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
HNRNPA1-210ENST00000550994 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
HNRNPA1-210ENST00000550994 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
HNRNPA1-210ENST00000550994 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
HNRNPA1-210ENST00000550994 NPM3O75607 178 aaKnown RBP16.54■□□□□ 0.24
HNRNPA1-210ENST00000550994 KCNA4P22459 653 aa16.39■□□□□ 0.21
HNRNPA1-210ENST00000550994 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
HNRNPA1-210ENST00000550994 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.2
HNRNPA1-210ENST00000550994 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
HNRNPA1-210ENST00000550994 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
HNRNPA1-210ENST00000550994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.154e-8■□□□□ 8.9
HNRNPA1-210ENST00000550994 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
HNRNPA1-210ENST00000550994 SLC4A2P04920 1241 aa15.83■□□□□ 0.12
HNRNPA1-210ENST00000550994 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.12
HNRNPA1-210ENST00000550994 NACADO15069 1562 aa15.69■□□□□ 0.1
HNRNPA1-210ENST00000550994 DCAF8L2P0C7V8 631 aa15.65■□□□□ 0.1
HNRNPA1-210ENST00000550994 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
HNRNPA1-210ENST00000550994 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
HNRNPA1-210ENST00000550994 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
HNRNPA1-210ENST00000550994 CAPN15O75808 1086 aa15.41■□□□□ 0.06
HNRNPA1-210ENST00000550994 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
HNRNPA1-210ENST00000550994 BICRAQ9NZM4 1560 aa15.39■□□□□ 0.05
HNRNPA1-210ENST00000550994 DSG3P32926 999 aa15.38■□□□□ 0.05
HNRNPA1-210ENST00000550994 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
HNRNPA1-210ENST00000550994 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
HNRNPA1-210ENST00000550994 MYCNP04198 464 aaPredicted RBP15.2■□□□□ 0.02
HNRNPA1-210ENST00000550994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
HNRNPA1-210ENST00000550994 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
HNRNPA1-210ENST00000550994 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
HNRNPA1-210ENST00000550994 ZBTB22O15209 634 aa15.17■□□□□ 0.02
HNRNPA1-210ENST00000550994 SAMD1Q6SPF0 538 aaPredicted RBP15.17■□□□□ 0.02
HNRNPA1-210ENST00000550994 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
HNRNPA1-210ENST00000550994 ABCB7O75027 752 aa15.16■□□□□ 0.02
HNRNPA1-210ENST00000550994 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
HNRNPA1-210ENST00000550994 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
HNRNPA1-210ENST00000550994 CC2D2AQ9P2K1 1620 aa15.14■□□□□ 0.01
HNRNPA1-210ENST00000550994 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
HNRNPA1-210ENST00000550994 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
HNRNPA1-210ENST00000550994 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
HNRNPA1-210ENST00000550994 APLP2Q06481 763 aa15.11■□□□□ 0.01
HNRNPA1-210ENST00000550994 EIF4G1Q04637 1599 aaKnown RBP15.06■□□□□ 0
HNRNPA1-210ENST00000550994 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
HNRNPA1-210ENST00000550994 POLA2Q14181 598 aa14.87□□□□□ -0.03
HNRNPA1-210ENST00000550994 DNAJC5Q9H3Z4 198 aa14.64□□□□□ -0.07
HNRNPA1-210ENST00000550994 ATXN8OSP0DMR3 200 aa14.6□□□□□ -0.07
HNRNPA1-210ENST00000550994 ERCC6Q03468 1493 aa14.54□□□□□ -0.08
HNRNPA1-210ENST00000550994 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
HNRNPA1-210ENST00000550994 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
HNRNPA1-210ENST00000550994 CUX2O14529 1486 aa14.5□□□□□ -0.09
HNRNPA1-210ENST00000550994 POTEHQ6S545 545 aa14.47□□□□□ -0.09
HNRNPA1-210ENST00000550994 NCAPD3P42695 1498 aa14.45□□□□□ -0.1
HNRNPA1-210ENST00000550994 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
HNRNPA1-210ENST00000550994 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
HNRNPA1-210ENST00000550994 ATAD2BQ9ULI0 1458 aa14.42□□□□□ -0.1
HNRNPA1-210ENST00000550994 SMARCA4P51532 1647 aa14.4□□□□□ -0.1
HNRNPA1-210ENST00000550994 SMARCA2P51531 1590 aa14.39□□□□□ -0.11
HNRNPA1-210ENST00000550994 HMGXB3Q12766 1538 aa14.37□□□□□ -0.11
HNRNPA1-210ENST00000550994 NESP48681 1621 aa14.36□□□□□ -0.11
HNRNPA1-210ENST00000550994 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
HNRNPA1-210ENST00000550994 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
HNRNPA1-210ENST00000550994 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
HNRNPA1-210ENST00000550994 BAZ1AQ9NRL2 1556 aaPredicted RBP14.29□□□□□ -0.12
HNRNPA1-210ENST00000550994 AKT1S1Q96B36 256 aa14.26□□□□□ -0.13
HNRNPA1-210ENST00000550994 THOC2Q8NI27 1593 aaKnown RBP14.25□□□□□ -0.13
HNRNPA1-210ENST00000550994 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
HNRNPA1-210ENST00000550994 LAMC3Q9Y6N6 1575 aa14.21□□□□□ -0.14
HNRNPA1-210ENST00000550994 REM2Q8IYK8 340 aaPredicted RBP14.2□□□□□ -0.14
HNRNPA1-210ENST00000550994 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
HNRNPA1-210ENST00000550994 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
HNRNPA1-210ENST00000550994 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
HNRNPA1-210ENST00000550994 FBLN2P98095 1184 aa14.15□□□□□ -0.14
HNRNPA1-210ENST00000550994 PDS5BQ9NTI5 1447 aa14.13□□□□□ -0.15
HNRNPA1-210ENST00000550994 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
HNRNPA1-210ENST00000550994 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
HNRNPA1-210ENST00000550994 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
HNRNPA1-210ENST00000550994 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
HNRNPA1-210ENST00000550994 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
HNRNPA1-210ENST00000550994 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
HNRNPA1-210ENST00000550994 CADPSQ9ULU8 1353 aa14.02□□□□□ -0.17
HNRNPA1-210ENST00000550994 WIZO95785 1651 aa14.01□□□□□ -0.17
HNRNPA1-210ENST00000550994 SSUH2Q9Y2M2 353 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms