RNA–Protein interactions for RNA: ENST00000550458.1

SRSF9-205, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 3

Gene SRSF9, Length 327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-205ENST00000550458 NISCHQ9Y2I1 1504 aa29.51■■■□□ 2.32
SRSF9-205ENST00000550458 CCDC180Q9P1Z9 1646 aa26.3■■□□□ 1.8
SRSF9-205ENST00000550458 ABCC9O60706 1549 aa26.01■■□□□ 1.75
SRSF9-205ENST00000550458 RB1CC1Q8TDY2 1594 aa24.89■■□□□ 1.58
SRSF9-205ENST00000550458 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
SRSF9-205ENST00000550458 NACADO15069 1562 aa24.81■■□□□ 1.56
SRSF9-205ENST00000550458 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
SRSF9-205ENST00000550458 ZCCHC6Q5VYS8 1495 aaKnown RBP24.5■■□□□ 1.51
SRSF9-205ENST00000550458 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
SRSF9-205ENST00000550458 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
SRSF9-205ENST00000550458 PABPN1Q86U42 306 aaKnown RBP eCLIP24.32■■□□□ 1.48
SRSF9-205ENST00000550458 BICRAQ9NZM4 1560 aa24.15■■□□□ 1.46
SRSF9-205ENST00000550458 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
SRSF9-205ENST00000550458 SCRIBQ14160 1630 aa24■■□□□ 1.43
SRSF9-205ENST00000550458 SHROOM4Q9ULL8 1493 aa23.83■■□□□ 1.41
SRSF9-205ENST00000550458 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
SRSF9-205ENST00000550458 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
SRSF9-205ENST00000550458 CECR2Q9BXF3 1484 aa23.39■■□□□ 1.34
SRSF9-205ENST00000550458 SMARCA4P51532 1647 aa22.93■■□□□ 1.26
SRSF9-205ENST00000550458 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
SRSF9-205ENST00000550458 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
SRSF9-205ENST00000550458 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
SRSF9-205ENST00000550458 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
SRSF9-205ENST00000550458 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
SRSF9-205ENST00000550458 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
SRSF9-205ENST00000550458 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
SRSF9-205ENST00000550458 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
SRSF9-205ENST00000550458 WIZO95785 1651 aa22.49■■□□□ 1.19
SRSF9-205ENST00000550458 NESP48681 1621 aa22.44■■□□□ 1.18
SRSF9-205ENST00000550458 ERCC6Q03468 1493 aa22.43■■□□□ 1.18
SRSF9-205ENST00000550458 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
SRSF9-205ENST00000550458 LAMC3Q9Y6N6 1575 aa22.33■■□□□ 1.16
SRSF9-205ENST00000550458 CUX2O14529 1486 aa22.26■■□□□ 1.15
SRSF9-205ENST00000550458 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
SRSF9-205ENST00000550458 PDS5BQ9NTI5 1447 aa22.22■■□□□ 1.15
SRSF9-205ENST00000550458 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
SRSF9-205ENST00000550458 KIF21AQ7Z4S6 1674 aa22.16■■□□□ 1.14
SRSF9-205ENST00000550458 THOC2Q8NI27 1593 aaKnown RBP22.1■■□□□ 1.13
SRSF9-205ENST00000550458 CFTRP13569 1480 aa22.04■■□□□ 1.12
SRSF9-205ENST00000550458 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
SRSF9-205ENST00000550458 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
SRSF9-205ENST00000550458 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
SRSF9-205ENST00000550458 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
SRSF9-205ENST00000550458 DNAJC5Q9H3Z4 198 aa21.92■■□□□ 1.1
SRSF9-205ENST00000550458 WDR62O43379 1518 aa21.89■■□□□ 1.09
SRSF9-205ENST00000550458 PRDM2Q13029 1718 aa21.85■■□□□ 1.09
SRSF9-205ENST00000550458 URB2Q14146 1524 aaKnown RBP21.76■■□□□ 1.07
SRSF9-205ENST00000550458 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
SRSF9-205ENST00000550458 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
SRSF9-205ENST00000550458 ABCC8Q09428 1581 aa21.59■■□□□ 1.05
SRSF9-205ENST00000550458 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
SRSF9-205ENST00000550458 IFT140Q96RY7 1462 aa21.51■■□□□ 1.03
SRSF9-205ENST00000550458 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
SRSF9-205ENST00000550458 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
SRSF9-205ENST00000550458 OSCARQ8IYS5 282 aa21.38■■□□□ 1.01
SRSF9-205ENST00000550458 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
SRSF9-205ENST00000550458 CUX1P39880 1505 aa21.34■■□□□ 1.01
SRSF9-205ENST00000550458 SOGA1O94964 1423 aa21.34■■□□□ 1.01
SRSF9-205ENST00000550458 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
SRSF9-205ENST00000550458 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 15e-20■■■■■ 27.4
SRSF9-205ENST00000550458 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
SRSF9-205ENST00000550458 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
SRSF9-205ENST00000550458 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
SRSF9-205ENST00000550458 FBLN2P98095 1184 aa21.16■□□□□ 0.98
SRSF9-205ENST00000550458 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
SRSF9-205ENST00000550458 WRNQ14191 1432 aaPredicted RBP eCLIP21.13■□□□□ 0.97
SRSF9-205ENST00000550458 CHD1O14646 1710 aa21.12■□□□□ 0.97
SRSF9-205ENST00000550458 TRIM41Q8WV44 630 aa21.11■□□□□ 0.97
SRSF9-205ENST00000550458 TOP2BQ02880 1626 aa21.09■□□□□ 0.97
SRSF9-205ENST00000550458 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
SRSF9-205ENST00000550458 GRIN2BQ13224 1484 aa21.08■□□□□ 0.97
SRSF9-205ENST00000550458 BIVM-ERCC5R4GMW8 1640 aa21.08■□□□□ 0.97
SRSF9-205ENST00000550458 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
SRSF9-205ENST00000550458 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
SRSF9-205ENST00000550458 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
SRSF9-205ENST00000550458 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
SRSF9-205ENST00000550458 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
SRSF9-205ENST00000550458 PBRM1Q86U86 1689 aa21.01■□□□□ 0.95
SRSF9-205ENST00000550458 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
SRSF9-205ENST00000550458 RIMBP3CA6NJZ7 1639 aa20.99■□□□□ 0.95
SRSF9-205ENST00000550458 RIMBP3BA6NNM3 1639 aa20.99■□□□□ 0.95
SRSF9-205ENST00000550458 RIMBP3Q9UFD9 1639 aa20.99■□□□□ 0.95
SRSF9-205ENST00000550458 SYNJ2O15056 1496 aa20.97■□□□□ 0.95
SRSF9-205ENST00000550458 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
SRSF9-205ENST00000550458 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
SRSF9-205ENST00000550458 CLASP1Q7Z460 1538 aa20.86■□□□□ 0.93
SRSF9-205ENST00000550458 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.92
SRSF9-205ENST00000550458 ADAMTS12P58397 1594 aa20.81■□□□□ 0.92
SRSF9-205ENST00000550458 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
SRSF9-205ENST00000550458 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
SRSF9-205ENST00000550458 ARAP1Q96P48 1450 aa20.77■□□□□ 0.92
SRSF9-205ENST00000550458 NUP160Q12769 1436 aa20.72■□□□□ 0.91
SRSF9-205ENST00000550458 KIF27Q86VH2 1401 aa20.71■□□□□ 0.91
SRSF9-205ENST00000550458 CEP170Q5SW79 1584 aa20.7■□□□□ 0.9
SRSF9-205ENST00000550458 IGF1RP08069 1367 aa20.7■□□□□ 0.9
SRSF9-205ENST00000550458 JPH4Q96JJ6 628 aa20.59■□□□□ 0.89
SRSF9-205ENST00000550458 CUL7Q14999 1698 aa20.58■□□□□ 0.89
SRSF9-205ENST00000550458 SHROOM2Q13796 1616 aa20.58■□□□□ 0.89
SRSF9-205ENST00000550458 ERCC6L2Q5T890 1561 aa20.58■□□□□ 0.88
SRSF9-205ENST00000550458 CARMIL1Q5VZK9 1371 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms