RNA–Protein interactions for RNA: ENST00000549832.1

ERBB3-213, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 3,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-213ENST00000549832 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
ERBB3-213ENST00000549832 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
ERBB3-213ENST00000549832 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
ERBB3-213ENST00000549832 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.49
ERBB3-213ENST00000549832 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
ERBB3-213ENST00000549832 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
ERBB3-213ENST00000549832 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
ERBB3-213ENST00000549832 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
ERBB3-213ENST00000549832 KCNA4P22459 653 aa16.25■□□□□ 0.19
ERBB3-213ENST00000549832 ADRA2BP18089 450 aa16.02■□□□□ 0.16
ERBB3-213ENST00000549832 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
ERBB3-213ENST00000549832 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
ERBB3-213ENST00000549832 PPP6R1Q9UPN7 881 aa15.69■□□□□ 0.1
ERBB3-213ENST00000549832 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
ERBB3-213ENST00000549832 DCAF1Q9Y4B6 1507 aa15.55■□□□□ 0.08
ERBB3-213ENST00000549832 NACADO15069 1562 aa15.48■□□□□ 0.07
ERBB3-213ENST00000549832 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
ERBB3-213ENST00000549832 SHROOM4Q9ULL8 1493 aa15.39■□□□□ 0.05
ERBB3-213ENST00000549832 FOXD1Q16676 465 aa15.37■□□□□ 0.05
ERBB3-213ENST00000549832 RB1CC1Q8TDY2 1594 aa15.37■□□□□ 0.05
ERBB3-213ENST00000549832 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
ERBB3-213ENST00000549832 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
ERBB3-213ENST00000549832 ABCC9O60706 1549 aa15.21■□□□□ 0.02
ERBB3-213ENST00000549832 ZCCHC6Q5VYS8 1495 aaKnown RBP15.16■□□□□ 0.02
ERBB3-213ENST00000549832 ZBTB22O15209 634 aa15.09■□□□□ 0.01
ERBB3-213ENST00000549832 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
ERBB3-213ENST00000549832 UNC13AQ9UPW8 1703 aa15.08■□□□□ 0
ERBB3-213ENST00000549832 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
ERBB3-213ENST00000549832 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
ERBB3-213ENST00000549832 DNAJC5BQ9UF47 199 aa14.96□□□□□ -0.02
ERBB3-213ENST00000549832 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
ERBB3-213ENST00000549832 CNKSR2Q8WXI2 1034 aa14.7□□□□□ -0.06
ERBB3-213ENST00000549832 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
ERBB3-213ENST00000549832 PIAS4Q8N2W9 510 aaPredicted RBP14.63□□□□□ -0.07
ERBB3-213ENST00000549832 PEG3Q9GZU2 1588 aa14.38□□□□□ -0.11
ERBB3-213ENST00000549832 EIF4G1Q04637 1599 aaKnown RBP14.35□□□□□ -0.11
ERBB3-213ENST00000549832 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
ERBB3-213ENST00000549832 SCRIBQ14160 1630 aa14.32□□□□□ -0.12
ERBB3-213ENST00000549832 SMARCA2P51531 1590 aa14.28□□□□□ -0.12
ERBB3-213ENST00000549832 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
ERBB3-213ENST00000549832 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
ERBB3-213ENST00000549832 CC2D2AQ9P2K1 1620 aa14.24□□□□□ -0.13
ERBB3-213ENST00000549832 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
ERBB3-213ENST00000549832 FKBP8Q14318 412 aa14.12□□□□□ -0.15
ERBB3-213ENST00000549832 NCAPD3P42695 1498 aa14.11□□□□□ -0.15
ERBB3-213ENST00000549832 SMARCA4P51532 1647 aa14.11□□□□□ -0.15
ERBB3-213ENST00000549832 BAZ1AQ9NRL2 1556 aaPredicted RBP14.1□□□□□ -0.15
ERBB3-213ENST00000549832 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
ERBB3-213ENST00000549832 CECR2Q9BXF3 1484 aa13.96□□□□□ -0.18
ERBB3-213ENST00000549832 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
ERBB3-213ENST00000549832 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
ERBB3-213ENST00000549832 ATAD2BQ9ULI0 1458 aa13.9□□□□□ -0.19
ERBB3-213ENST00000549832 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
ERBB3-213ENST00000549832 LAMC3Q9Y6N6 1575 aa13.87□□□□□ -0.19
ERBB3-213ENST00000549832 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
ERBB3-213ENST00000549832 PLCB2Q00722 1185 aa13.84□□□□□ -0.19
ERBB3-213ENST00000549832 CUX2O14529 1486 aa13.8□□□□□ -0.2
ERBB3-213ENST00000549832 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.24e-8■□□□□ 9.3
ERBB3-213ENST00000549832 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
ERBB3-213ENST00000549832 MSH5O43196 834 aa13.74□□□□□ -0.21
ERBB3-213ENST00000549832 HRCP23327 699 aa13.73□□□□□ -0.21
ERBB3-213ENST00000549832 TOP2AP11388 1531 aaKnown RBP13.72□□□□□ -0.21
ERBB3-213ENST00000549832 DAXXQ9UER7 740 aaPredicted RBP13.7□□□□□ -0.22
ERBB3-213ENST00000549832 THOC2Q8NI27 1593 aaKnown RBP13.68□□□□□ -0.22
ERBB3-213ENST00000549832 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
ERBB3-213ENST00000549832 MROH2BQ7Z745 1585 aa13.67□□□□□ -0.22
ERBB3-213ENST00000549832 WDR97A6NE52 1622 aa13.66□□□□□ -0.22
ERBB3-213ENST00000549832 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
ERBB3-213ENST00000549832 BCANQ96GW7 911 aa13.62□□□□□ -0.23
ERBB3-213ENST00000549832 DCAF8L2P0C7V8 631 aa13.6□□□□□ -0.23
ERBB3-213ENST00000549832 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
ERBB3-213ENST00000549832 WDR62O43379 1518 aa13.58□□□□□ -0.24
ERBB3-213ENST00000549832 TAOK2Q9UL54 1235 aa13.54□□□□□ -0.24
ERBB3-213ENST00000549832 WIZO95785 1651 aa13.53□□□□□ -0.24
ERBB3-213ENST00000549832 VSIG10Q8N0Z9 540 aa13.52□□□□□ -0.24
ERBB3-213ENST00000549832 CFTRP13569 1480 aa13.5□□□□□ -0.25
ERBB3-213ENST00000549832 KIF21AQ7Z4S6 1674 aa13.49□□□□□ -0.25
ERBB3-213ENST00000549832 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
ERBB3-213ENST00000549832 PDS5BQ9NTI5 1447 aa13.45□□□□□ -0.26
ERBB3-213ENST00000549832 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
ERBB3-213ENST00000549832 PROM2Q8N271 834 aa13.44□□□□□ -0.26
ERBB3-213ENST00000549832 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
ERBB3-213ENST00000549832 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
ERBB3-213ENST00000549832 PCGF6Q9BYE7 350 aa13.42□□□□□ -0.26
ERBB3-213ENST00000549832 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
ERBB3-213ENST00000549832 PPARGC1BQ86YN6 1023 aaKnown RBP13.4□□□□□ -0.26
ERBB3-213ENST00000549832 MRC2Q9UBG0 1479 aa13.4□□□□□ -0.26
ERBB3-213ENST00000549832 HAP1P54257 671 aaPredicted RBP13.4□□□□□ -0.26
ERBB3-213ENST00000549832 MYT1Q01538 1121 aa13.38□□□□□ -0.27
ERBB3-213ENST00000549832 APLP2Q06481 763 aa13.32□□□□□ -0.28
ERBB3-213ENST00000549832 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
ERBB3-213ENST00000549832 CEP164Q9UPV0 1460 aa13.28□□□□□ -0.28
ERBB3-213ENST00000549832 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
ERBB3-213ENST00000549832 LOC105371045A0A1W2PR82 267 aa13.26□□□□□ -0.29
ERBB3-213ENST00000549832 PKD2Q13563 968 aa13.22□□□□□ -0.29
ERBB3-213ENST00000549832 ERCC6Q03468 1493 aa13.21□□□□□ -0.29
ERBB3-213ENST00000549832 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.29
ERBB3-213ENST00000549832 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
ERBB3-213ENST00000549832 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.29
ERBB3-213ENST00000549832 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms