RNA–Protein interactions for RNA: ENST00000548656.2

CR383656.2-201, humanhuman

BASIC

Gene CR383656.2, Length 2,254 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.2-201ENST00000548656 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
CR383656.2-201ENST00000548656 CCDC180Q9P1Z9 1646 aa26.78■■□□□ 1.88
CR383656.2-201ENST00000548656 ZCCHC6Q5VYS8 1495 aaKnown RBP26.06■■□□□ 1.76
CR383656.2-201ENST00000548656 DCAF8L2P0C7V8 631 aa25.74■■□□□ 1.71
CR383656.2-201ENST00000548656 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
CR383656.2-201ENST00000548656 DCAF1Q9Y4B6 1507 aa25.54■■□□□ 1.68
CR383656.2-201ENST00000548656 ABCC9O60706 1549 aa25.34■■□□□ 1.65
CR383656.2-201ENST00000548656 MYO15BQ96JP2 1530 aa25.14■■□□□ 1.61
CR383656.2-201ENST00000548656 NACADO15069 1562 aa24.96■■□□□ 1.59
CR383656.2-201ENST00000548656 SCRIBQ14160 1630 aa24.82■■□□□ 1.56
CR383656.2-201ENST00000548656 PELP1Q8IZL8 1130 aaKnown RBP24.78■■□□□ 1.56
CR383656.2-201ENST00000548656 SUPT5HO00267 1087 aaKnown RBP24.77■■□□□ 1.56
CR383656.2-201ENST00000548656 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
CR383656.2-201ENST00000548656 MYT1Q01538 1121 aa24.25■■□□□ 1.47
CR383656.2-201ENST00000548656 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
CR383656.2-201ENST00000548656 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
CR383656.2-201ENST00000548656 CECR2Q9BXF3 1484 aa24.12■■□□□ 1.45
CR383656.2-201ENST00000548656 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
CR383656.2-201ENST00000548656 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
CR383656.2-201ENST00000548656 BICRAQ9NZM4 1560 aa23.97■■□□□ 1.43
CR383656.2-201ENST00000548656 BAZ1AQ9NRL2 1556 aaPredicted RBP23.89■■□□□ 1.41
CR383656.2-201ENST00000548656 WIZO95785 1651 aa23.77■■□□□ 1.4
CR383656.2-201ENST00000548656 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
CR383656.2-201ENST00000548656 SMARCA4P51532 1647 aa23.74■■□□□ 1.39
CR383656.2-201ENST00000548656 HRCP23327 699 aa23.73■■□□□ 1.39
CR383656.2-201ENST00000548656 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
CR383656.2-201ENST00000548656 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
CR383656.2-201ENST00000548656 ATAD2BQ9ULI0 1458 aa23.35■■□□□ 1.33
CR383656.2-201ENST00000548656 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
CR383656.2-201ENST00000548656 SMARCA2P51531 1590 aa23.3■■□□□ 1.32
CR383656.2-201ENST00000548656 EIF4G1Q04637 1599 aaKnown RBP23.25■■□□□ 1.31
CR383656.2-201ENST00000548656 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
CR383656.2-201ENST00000548656 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
CR383656.2-201ENST00000548656 TTBK1Q5TCY1 1321 aaPredicted RBP23.19■■□□□ 1.3
CR383656.2-201ENST00000548656 NCAPD3P42695 1498 aa23.08■■□□□ 1.29
CR383656.2-201ENST00000548656 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
CR383656.2-201ENST00000548656 SCAF1Q9H7N4 1312 aaKnown RBP22.96■■□□□ 1.27
CR383656.2-201ENST00000548656 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
CR383656.2-201ENST00000548656 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
CR383656.2-201ENST00000548656 PPARGC1BQ86YN6 1023 aaKnown RBP22.88■■□□□ 1.25
CR383656.2-201ENST00000548656 FAM9AQ8IZU1 332 aaPredicted RBP22.88■■□□□ 1.25
CR383656.2-201ENST00000548656 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
CR383656.2-201ENST00000548656 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
CR383656.2-201ENST00000548656 CFTRP13569 1480 aa22.64■■□□□ 1.22
CR383656.2-201ENST00000548656 EHMT2Q96KQ7 1210 aa22.61■■□□□ 1.21
CR383656.2-201ENST00000548656 SYNJ1O43426 1573 aa22.61■■□□□ 1.21
CR383656.2-201ENST00000548656 SOGA1O94964 1423 aa22.58■■□□□ 1.2
CR383656.2-201ENST00000548656 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
CR383656.2-201ENST00000548656 EEA1Q15075 1411 aa22.49■■□□□ 1.19
CR383656.2-201ENST00000548656 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
CR383656.2-201ENST00000548656 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
CR383656.2-201ENST00000548656 CSRNP3Q8WYN3 585 aa22.44■■□□□ 1.18
CR383656.2-201ENST00000548656 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
CR383656.2-201ENST00000548656 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
CR383656.2-201ENST00000548656 CUX1P39880 1505 aa22.39■■□□□ 1.18
CR383656.2-201ENST00000548656 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
CR383656.2-201ENST00000548656 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
CR383656.2-201ENST00000548656 NESP48681 1621 aa22.31■■□□□ 1.16
CR383656.2-201ENST00000548656 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
CR383656.2-201ENST00000548656 PRKCSHP14314 528 aaPredicted RBP22.23■■□□□ 1.15
CR383656.2-201ENST00000548656 UBTFP17480 764 aaKnown RBP22.23■■□□□ 1.15
CR383656.2-201ENST00000548656 GOLGA3Q08378 1498 aa22.23■■□□□ 1.15
CR383656.2-201ENST00000548656 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
CR383656.2-201ENST00000548656 TNIKQ9UKE5 1360 aa22.21■■□□□ 1.15
CR383656.2-201ENST00000548656 BCL11AQ9H165 835 aa22.2■■□□□ 1.14
CR383656.2-201ENST00000548656 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
CR383656.2-201ENST00000548656 KIF21BO75037 1637 aa22.15■■□□□ 1.14
CR383656.2-201ENST00000548656 KIF27Q86VH2 1401 aa22.14■■□□□ 1.14
CR383656.2-201ENST00000548656 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.13
CR383656.2-201ENST00000548656 FGD5Q6ZNL6 1462 aa22.13■■□□□ 1.13
CR383656.2-201ENST00000548656 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
CR383656.2-201ENST00000548656 PDS5BQ9NTI5 1447 aa22.12■■□□□ 1.13
CR383656.2-201ENST00000548656 DNMBPQ6XZF7 1577 aa22.09■■□□□ 1.13
CR383656.2-201ENST00000548656 RAPGEF2Q9Y4G8 1499 aa22.08■■□□□ 1.13
CR383656.2-201ENST00000548656 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
CR383656.2-201ENST00000548656 CUX2O14529 1486 aa22.06■■□□□ 1.12
CR383656.2-201ENST00000548656 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
CR383656.2-201ENST00000548656 URB2Q14146 1524 aaKnown RBP22■■□□□ 1.11
CR383656.2-201ENST00000548656 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
CR383656.2-201ENST00000548656 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
CR383656.2-201ENST00000548656 POLA1P09884 1462 aaPredicted RBP21.99■■□□□ 1.11
CR383656.2-201ENST00000548656 CENPBP07199 599 aaPredicted RBP21.97■■□□□ 1.11
CR383656.2-201ENST00000548656 ERICH3Q5RHP9 1530 aa21.97■■□□□ 1.11
CR383656.2-201ENST00000548656 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
CR383656.2-201ENST00000548656 IGF1RP08069 1367 aa21.95■■□□□ 1.1
CR383656.2-201ENST00000548656 KIF21AQ7Z4S6 1674 aa21.93■■□□□ 1.1
CR383656.2-201ENST00000548656 ABCA10Q8WWZ4 1543 aa21.91■■□□□ 1.1
CR383656.2-201ENST00000548656 CLIP1P30622 1438 aa21.91■■□□□ 1.1
CR383656.2-201ENST00000548656 NEUROD1Q13562 356 aa21.9■■□□□ 1.1
CR383656.2-201ENST00000548656 ERICH6Q7L0X2 663 aa21.9■■□□□ 1.1
CR383656.2-201ENST00000548656 GTF3C3Q9Y5Q9 886 aa21.89■■□□□ 1.09
CR383656.2-201ENST00000548656 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
CR383656.2-201ENST00000548656 CARMIL1Q5VZK9 1371 aa21.85■■□□□ 1.09
CR383656.2-201ENST00000548656 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
CR383656.2-201ENST00000548656 APLP2Q06481 763 aa21.77■■□□□ 1.08
CR383656.2-201ENST00000548656 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
CR383656.2-201ENST00000548656 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
CR383656.2-201ENST00000548656 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
CR383656.2-201ENST00000548656 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
CR383656.2-201ENST00000548656 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms