RNA–Protein interactions for RNA: ENST00000547545.1

MBD6-204, Transcript of methyl-CpG binding domain protein 6, humanhuman

TSL 1 (best)

Gene MBD6, Length 1,884 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD6-204ENST00000547545 NISCHQ9Y2I1 1504 aa40.52■■■■■ 4.08
MBD6-204ENST00000547545 CCDC180Q9P1Z9 1646 aa35.56■■■■□ 3.28
MBD6-204ENST00000547545 ABCC9O60706 1549 aa34.07■■■■□ 3.04
MBD6-204ENST00000547545 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.03
MBD6-204ENST00000547545 SHROOM4Q9ULL8 1493 aa33.65■■■□□ 2.98
MBD6-204ENST00000547545 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
MBD6-204ENST00000547545 DCAF1Q9Y4B6 1507 aa33.49■■■□□ 2.95
MBD6-204ENST00000547545 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
MBD6-204ENST00000547545 NACADO15069 1562 aa33.22■■■□□ 2.91
MBD6-204ENST00000547545 RB1CC1Q8TDY2 1594 aa33.05■■■□□ 2.88
MBD6-204ENST00000547545 SUPT5HO00267 1087 aaKnown RBP33.01■■■□□ 2.88
MBD6-204ENST00000547545 SCRIBQ14160 1630 aa32.64■■■□□ 2.82
MBD6-204ENST00000547545 UNC13AQ9UPW8 1703 aa32.43■■■□□ 2.78
MBD6-204ENST00000547545 CHIC1Q5VXU3 224 aa32.36■■■□□ 2.77
MBD6-204ENST00000547545 BICRAQ9NZM4 1560 aa32.11■■■□□ 2.73
MBD6-204ENST00000547545 PABPN1Q86U42 306 aaKnown RBP eCLIP32.01■■■□□ 2.72
MBD6-204ENST00000547545 RSF1Q96T23 1441 aaPredicted RBP31.6■■■□□ 2.65
MBD6-204ENST00000547545 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
MBD6-204ENST00000547545 HRCP23327 699 aa31.48■■■□□ 2.63
MBD6-204ENST00000547545 BAZ1AQ9NRL2 1556 aaPredicted RBP31.31■■■□□ 2.6
MBD6-204ENST00000547545 MROH2BQ7Z745 1585 aa31.29■■■□□ 2.6
MBD6-204ENST00000547545 SMARCA4P51532 1647 aa31.26■■■□□ 2.59
MBD6-204ENST00000547545 PCGF6Q9BYE7 350 aa31.21■■■□□ 2.59
MBD6-204ENST00000547545 LOC105371045A0A1W2PR82 267 aa31.19■■■□□ 2.58
MBD6-204ENST00000547545 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
MBD6-204ENST00000547545 WIZO95785 1651 aa31.02■■■□□ 2.56
MBD6-204ENST00000547545 TRIM41Q8WV44 630 aa30.91■■■□□ 2.54
MBD6-204ENST00000547545 PEG3Q9GZU2 1588 aa30.9■■■□□ 2.54
MBD6-204ENST00000547545 ATAD2BQ9ULI0 1458 aa30.86■■■□□ 2.53
MBD6-204ENST00000547545 TRIM26Q12899 539 aaPredicted RBP30.85■■■□□ 2.53
MBD6-204ENST00000547545 CC2D2AQ9P2K1 1620 aa30.83■■■□□ 2.53
MBD6-204ENST00000547545 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
MBD6-204ENST00000547545 NCAPD3P42695 1498 aa30.67■■■□□ 2.5
MBD6-204ENST00000547545 TOP2AP11388 1531 aaKnown RBP30.67■■■□□ 2.5
MBD6-204ENST00000547545 BAZ1BQ9UIG0 1483 aaKnown RBP30.65■■■□□ 2.5
MBD6-204ENST00000547545 HMGXB3Q12766 1538 aa30.6■■■□□ 2.49
MBD6-204ENST00000547545 PPARGC1BQ86YN6 1023 aaKnown RBP30.51■■■□□ 2.47
MBD6-204ENST00000547545 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.47
MBD6-204ENST00000547545 FAM9AQ8IZU1 332 aaPredicted RBP30.42■■■□□ 2.46
MBD6-204ENST00000547545 CCDC88BA6NC98 1476 aa30.34■■■□□ 2.45
MBD6-204ENST00000547545 ZEB1P37275 1124 aaPredicted RBP30.33■■■□□ 2.45
MBD6-204ENST00000547545 ABCC8Q09428 1581 aa30.11■■■□□ 2.41
MBD6-204ENST00000547545 EEA1Q15075 1411 aa29.97■■■□□ 2.39
MBD6-204ENST00000547545 EHMT2Q96KQ7 1210 aa29.95■■■□□ 2.39
MBD6-204ENST00000547545 WRNQ14191 1432 aaPredicted RBP eCLIP29.93■■■□□ 2.38
MBD6-204ENST00000547545 CFTRP13569 1480 aa29.86■■■□□ 2.37
MBD6-204ENST00000547545 CADPSQ9ULU8 1353 aa29.84■■■□□ 2.37
MBD6-204ENST00000547545 TNIKQ9UKE5 1360 aa29.81■■■□□ 2.36
MBD6-204ENST00000547545 SOGA1O94964 1423 aa29.79■■■□□ 2.36
MBD6-204ENST00000547545 NESP48681 1621 aa29.78■■■□□ 2.36
MBD6-204ENST00000547545 CEP162Q5TB80 1403 aa29.76■■■□□ 2.36
MBD6-204ENST00000547545 LAMC3Q9Y6N6 1575 aa29.71■■■□□ 2.35
MBD6-204ENST00000547545 PRDM2Q13029 1718 aa29.69■■■□□ 2.34
MBD6-204ENST00000547545 CSRNP3Q8WYN3 585 aa29.65■■■□□ 2.34
MBD6-204ENST00000547545 GOLGA3Q08378 1498 aa29.64■■■□□ 2.34
MBD6-204ENST00000547545 RUSC2Q8N2Y8 1516 aa29.63■■■□□ 2.33
MBD6-204ENST00000547545 KIF21BO75037 1637 aa29.59■■■□□ 2.33
MBD6-204ENST00000547545 SYNJ1O43426 1573 aa29.59■■■□□ 2.33
MBD6-204ENST00000547545 FANCD2Q9BXW9 1451 aa29.52■■■□□ 2.32
MBD6-204ENST00000547545 CEP164Q9UPV0 1460 aa29.49■■■□□ 2.31
MBD6-204ENST00000547545 PDS5BQ9NTI5 1447 aa29.47■■■□□ 2.31
MBD6-204ENST00000547545 KIF21AQ7Z4S6 1674 aa29.42■■■□□ 2.3
MBD6-204ENST00000547545 UBTFP17480 764 aaKnown RBP29.38■■■□□ 2.29
MBD6-204ENST00000547545 CCER1Q8TC90 406 aaPredicted RBP29.38■■■□□ 2.29
MBD6-204ENST00000547545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.37■■■□□ 2.29
MBD6-204ENST00000547545 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
MBD6-204ENST00000547545 BIVM-ERCC5R4GMW8 1640 aa29.32■■■□□ 2.28
MBD6-204ENST00000547545 CUX1P39880 1505 aa29.3■■■□□ 2.28
MBD6-204ENST00000547545 ERCC6Q03468 1493 aa29.24■■■□□ 2.27
MBD6-204ENST00000547545 CLIP1P30622 1438 aa29.2■■■□□ 2.27
MBD6-204ENST00000547545 URB2Q14146 1524 aaKnown RBP29.2■■■□□ 2.26
MBD6-204ENST00000547545 DNMBPQ6XZF7 1577 aa29.17■■■□□ 2.26
MBD6-204ENST00000547545 VPS8Q8N3P4 1428 aa29.17■■■□□ 2.26
MBD6-204ENST00000547545 TOPBP1Q92547 1522 aa29.15■■■□□ 2.26
MBD6-204ENST00000547545 MRC2Q9UBG0 1479 aa29.14■■■□□ 2.25
MBD6-204ENST00000547545 RAPGEF2Q9Y4G8 1499 aa29.13■■■□□ 2.25
MBD6-204ENST00000547545 ERICH3Q5RHP9 1530 aa29.11■■■□□ 2.25
MBD6-204ENST00000547545 THOC2Q8NI27 1593 aaKnown RBP29.07■■■□□ 2.24
MBD6-204ENST00000547545 TTBK1Q5TCY1 1321 aaPredicted RBP29.06■■■□□ 2.24
MBD6-204ENST00000547545 FGD5Q6ZNL6 1462 aa29.04■■■□□ 2.24
MBD6-204ENST00000547545 WDR62O43379 1518 aa29.03■■■□□ 2.24
MBD6-204ENST00000547545 POLA1P09884 1462 aaPredicted RBP28.98■■■□□ 2.23
MBD6-204ENST00000547545 PRXQ9BXM0 1461 aa28.98■■■□□ 2.23
MBD6-204ENST00000547545 SCAF1Q9H7N4 1312 aaKnown RBP28.89■■■□□ 2.22
MBD6-204ENST00000547545 RAD54L2Q9Y4B4 1467 aa28.88■■■□□ 2.21
MBD6-204ENST00000547545 DIEXFQ68CQ4 756 aaKnown RBP28.88■■■□□ 2.21
MBD6-204ENST00000547545 CUX2O14529 1486 aa28.83■■■□□ 2.21
MBD6-204ENST00000547545 APLP2Q06481 763 aa28.82■■■□□ 2.2
MBD6-204ENST00000547545 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
MBD6-204ENST00000547545 KIF27Q86VH2 1401 aa28.79■■■□□ 2.2
MBD6-204ENST00000547545 TARBP1Q13395 1621 aaKnown RBP28.77■■■□□ 2.2
MBD6-204ENST00000547545 ABCA10Q8WWZ4 1543 aa28.77■■■□□ 2.2
MBD6-204ENST00000547545 WDR97A6NE52 1622 aa28.75■■■□□ 2.19
MBD6-204ENST00000547545 ZNF316A6NFI3 1004 aaPredicted RBP28.74■■■□□ 2.19
MBD6-204ENST00000547545 ACIN1Q9UKV3 1341 aaKnown RBP28.72■■■□□ 2.19
MBD6-204ENST00000547545 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
MBD6-204ENST00000547545 HNRNPUL2Q1KMD3 747 aaKnown RBP28.69■■■□□ 2.18
MBD6-204ENST00000547545 TDRD9Q8NDG6 1382 aaKnown RBP28.63■■■□□ 2.17
MBD6-204ENST00000547545 PELP1Q8IZL8 1130 aaKnown RBP28.62■■■□□ 2.17
MBD6-204ENST00000547545 ABCA5Q8WWZ7 1642 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms