RNA–Protein interactions for RNA: ENST00000547176.3

KRT8-209, Transcript of keratin 8, humanhuman

TSL 5

Gene KRT8, Length 250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT8-209ENST00000547176 NISCHQ9Y2I1 1504 aa33.6■■■□□ 2.97
KRT8-209ENST00000547176 CCDC180Q9P1Z9 1646 aa29.91■■■□□ 2.38
KRT8-209ENST00000547176 ABCC9O60706 1549 aa29.68■■■□□ 2.34
KRT8-209ENST00000547176 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.14
KRT8-209ENST00000547176 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
KRT8-209ENST00000547176 NACADO15069 1562 aa28.27■■■□□ 2.12
KRT8-209ENST00000547176 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
KRT8-209ENST00000547176 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.05
KRT8-209ENST00000547176 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
KRT8-209ENST00000547176 DCAF1Q9Y4B6 1507 aa27.74■■■□□ 2.03
KRT8-209ENST00000547176 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
KRT8-209ENST00000547176 DNAJC5BQ9UF47 199 aa27.52■■■□□ 2
KRT8-209ENST00000547176 BICRAQ9NZM4 1560 aa27.46■■□□□ 1.99
KRT8-209ENST00000547176 SCRIBQ14160 1630 aa27.34■■□□□ 1.97
KRT8-209ENST00000547176 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
KRT8-209ENST00000547176 EIF4G1Q04637 1599 aaKnown RBP26.8■■□□□ 1.88
KRT8-209ENST00000547176 CC2D2AQ9P2K1 1620 aa26.77■■□□□ 1.88
KRT8-209ENST00000547176 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
KRT8-209ENST00000547176 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
KRT8-209ENST00000547176 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
KRT8-209ENST00000547176 ATAD2BQ9ULI0 1458 aa26.08■■□□□ 1.77
KRT8-209ENST00000547176 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
KRT8-209ENST00000547176 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
KRT8-209ENST00000547176 HMGXB3Q12766 1538 aa25.89■■□□□ 1.74
KRT8-209ENST00000547176 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
KRT8-209ENST00000547176 BAZ1BQ9UIG0 1483 aaKnown RBP25.87■■□□□ 1.73
KRT8-209ENST00000547176 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
KRT8-209ENST00000547176 ERCC6Q03468 1493 aa25.64■■□□□ 1.69
KRT8-209ENST00000547176 WIZO95785 1651 aa25.58■■□□□ 1.68
KRT8-209ENST00000547176 NESP48681 1621 aa25.56■■□□□ 1.68
KRT8-209ENST00000547176 RSF1Q96T23 1441 aaPredicted RBP25.53■■□□□ 1.68
KRT8-209ENST00000547176 LAMC3Q9Y6N6 1575 aa25.44■■□□□ 1.66
KRT8-209ENST00000547176 CUX2O14529 1486 aa25.4■■□□□ 1.66
KRT8-209ENST00000547176 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
KRT8-209ENST00000547176 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
KRT8-209ENST00000547176 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
KRT8-209ENST00000547176 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
KRT8-209ENST00000547176 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.62
KRT8-209ENST00000547176 CFTRP13569 1480 aa25.12■■□□□ 1.61
KRT8-209ENST00000547176 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
KRT8-209ENST00000547176 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
KRT8-209ENST00000547176 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
KRT8-209ENST00000547176 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
KRT8-209ENST00000547176 DNAJC5Q9H3Z4 198 aa25.05■■□□□ 1.6
KRT8-209ENST00000547176 WDR62O43379 1518 aa24.93■■□□□ 1.58
KRT8-209ENST00000547176 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
KRT8-209ENST00000547176 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
KRT8-209ENST00000547176 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
KRT8-209ENST00000547176 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
KRT8-209ENST00000547176 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
KRT8-209ENST00000547176 IFT140Q96RY7 1462 aa24.54■■□□□ 1.52
KRT8-209ENST00000547176 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
KRT8-209ENST00000547176 OSCARQ8IYS5 282 aa24.44■■□□□ 1.5
KRT8-209ENST00000547176 ZNF608Q9ULD9 1512 aaPredicted RBP24.44■■□□□ 1.5
KRT8-209ENST00000547176 POLA1P09884 1462 aaPredicted RBP24.37■■□□□ 1.49
KRT8-209ENST00000547176 SOGA1O94964 1423 aa24.35■■□□□ 1.49
KRT8-209ENST00000547176 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.485e-8■■■■□ 20.2
KRT8-209ENST00000547176 RAD54L2Q9Y4B4 1467 aa24.31■■□□□ 1.48
KRT8-209ENST00000547176 TARBP1Q13395 1621 aaKnown RBP24.3■■□□□ 1.48
KRT8-209ENST00000547176 CUX1P39880 1505 aa24.3■■□□□ 1.48
KRT8-209ENST00000547176 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
KRT8-209ENST00000547176 EIF4G3O43432 1585 aaKnown RBP24.27■■□□□ 1.48
KRT8-209ENST00000547176 TDRD9Q8NDG6 1382 aaKnown RBP24.26■■□□□ 1.47
KRT8-209ENST00000547176 FBLN2P98095 1184 aa24.21■■□□□ 1.47
KRT8-209ENST00000547176 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
KRT8-209ENST00000547176 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
KRT8-209ENST00000547176 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
KRT8-209ENST00000547176 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
KRT8-209ENST00000547176 GRIN2BQ13224 1484 aa24.06■■□□□ 1.44
KRT8-209ENST00000547176 SNAPC4Q5SXM2 1469 aa24.04■■□□□ 1.44
KRT8-209ENST00000547176 GAPVD1Q14C86 1478 aa24.03■■□□□ 1.44
KRT8-209ENST00000547176 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
KRT8-209ENST00000547176 CHD1O14646 1710 aa24.01■■□□□ 1.43
KRT8-209ENST00000547176 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
KRT8-209ENST00000547176 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
KRT8-209ENST00000547176 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
KRT8-209ENST00000547176 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
KRT8-209ENST00000547176 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
KRT8-209ENST00000547176 RIMBP3CA6NJZ7 1639 aa23.91■■□□□ 1.42
KRT8-209ENST00000547176 RIMBP3BA6NNM3 1639 aa23.91■■□□□ 1.42
KRT8-209ENST00000547176 RIMBP3Q9UFD9 1639 aa23.91■■□□□ 1.42
KRT8-209ENST00000547176 ARHGEF11O15085 1522 aa23.89■■□□□ 1.42
KRT8-209ENST00000547176 PBRM1Q86U86 1689 aa23.89■■□□□ 1.41
KRT8-209ENST00000547176 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
KRT8-209ENST00000547176 CYB5RLQ6IPT4 315 aa23.85■■□□□ 1.41
KRT8-209ENST00000547176 CLASP1Q7Z460 1538 aa23.75■■□□□ 1.39
KRT8-209ENST00000547176 FHAD1B1AJZ9 1412 aa23.74■■□□□ 1.39
KRT8-209ENST00000547176 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
KRT8-209ENST00000547176 GRIN2AQ12879 1464 aa23.72■■□□□ 1.39
KRT8-209ENST00000547176 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
KRT8-209ENST00000547176 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
KRT8-209ENST00000547176 KIF27Q86VH2 1401 aa23.65■■□□□ 1.38
KRT8-209ENST00000547176 NUP160Q12769 1436 aa23.61■■□□□ 1.37
KRT8-209ENST00000547176 IGF1RP08069 1367 aa23.58■■□□□ 1.37
KRT8-209ENST00000547176 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
KRT8-209ENST00000547176 TRHP20396 242 aaPredicted RBP23.51■■□□□ 1.35
KRT8-209ENST00000547176 JPH4Q96JJ6 628 aa23.51■■□□□ 1.35
KRT8-209ENST00000547176 CARMIL1Q5VZK9 1371 aa23.46■■□□□ 1.35
KRT8-209ENST00000547176 CUL7Q14999 1698 aa23.43■■□□□ 1.34
KRT8-209ENST00000547176 ERCC6L2Q5T890 1561 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms