RNA–Protein interactions for RNA: ENST00000547002.5

SLC48A1-205, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3 BASIC

Gene SLC48A1, Length 751 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-205ENST00000547002 NISCHQ9Y2I1 1504 aa12.41□□□□□ -0.42
SLC48A1-205ENST00000547002 AEBP2Q6ZN18 517 aaPredicted RBP12.13□□□□□ -0.47
SLC48A1-205ENST00000547002 CHIC1Q5VXU3 224 aa11.5□□□□□ -0.57
SLC48A1-205ENST00000547002 CCDC180Q9P1Z9 1646 aa10.74□□□□□ -0.69
SLC48A1-205ENST00000547002 DNAJC5BQ9UF47 199 aa10.54□□□□□ -0.72
SLC48A1-205ENST00000547002 ABCC9O60706 1549 aa10.52□□□□□ -0.73
SLC48A1-205ENST00000547002 ZCCHC6Q5VYS8 1495 aaKnown RBP10.44□□□□□ -0.74
SLC48A1-205ENST00000547002 DCAF1Q9Y4B6 1507 aa10.38□□□□□ -0.75
SLC48A1-205ENST00000547002 SENP3Q9H4L4 574 aaPredicted RBP10.36□□□□□ -0.75
SLC48A1-205ENST00000547002 DNAJC5Q9H3Z4 198 aa10.34□□□□□ -0.75
SLC48A1-205ENST00000547002 PHF23Q9BUL5 403 aaPredicted RBP10.23□□□□□ -0.77
SLC48A1-205ENST00000547002 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
SLC48A1-205ENST00000547002 SHROOM4Q9ULL8 1493 aa10.03□□□□□ -0.8
SLC48A1-205ENST00000547002 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
SLC48A1-205ENST00000547002 NACADO15069 1562 aa9.99□□□□□ -0.81
SLC48A1-205ENST00000547002 SUPT5HO00267 1087 aaKnown RBP9.84□□□□□ -0.83
SLC48A1-205ENST00000547002 RB1CC1Q8TDY2 1594 aa9.8□□□□□ -0.84
SLC48A1-205ENST00000547002 SCRIBQ14160 1630 aa9.71□□□□□ -0.85
SLC48A1-205ENST00000547002 RSF1Q96T23 1441 aaPredicted RBP9.69□□□□□ -0.86
SLC48A1-205ENST00000547002 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
SLC48A1-205ENST00000547002 FOXD1Q16676 465 aa9.66□□□□□ -0.86
SLC48A1-205ENST00000547002 CECR2Q9BXF3 1484 aa9.59□□□□□ -0.87
SLC48A1-205ENST00000547002 BAZ1AQ9NRL2 1556 aaPredicted RBP9.57□□□□□ -0.88
SLC48A1-205ENST00000547002 TRIM41Q8WV44 630 aa9.54□□□□□ -0.88
SLC48A1-205ENST00000547002 MROH2BQ7Z745 1585 aa9.52□□□□□ -0.89
SLC48A1-205ENST00000547002 UNC13AQ9UPW8 1703 aa9.51□□□□□ -0.89
SLC48A1-205ENST00000547002 BICRAQ9NZM4 1560 aa9.46□□□□□ -0.9
SLC48A1-205ENST00000547002 CUX2O14529 1486 aa9.45□□□□□ -0.9
SLC48A1-205ENST00000547002 SMARCA4P51532 1647 aa9.44□□□□□ -0.9
SLC48A1-205ENST00000547002 CC2D2AQ9P2K1 1620 aa9.44□□□□□ -0.9
SLC48A1-205ENST00000547002 PEG3Q9GZU2 1588 aa9.43□□□□□ -0.9
SLC48A1-205ENST00000547002 WIZO95785 1651 aa9.42□□□□□ -0.9
SLC48A1-205ENST00000547002 TOP2AP11388 1531 aaKnown RBP9.41□□□□□ -0.9
SLC48A1-205ENST00000547002 CCDC88BA6NC98 1476 aa9.31□□□□□ -0.92
SLC48A1-205ENST00000547002 SMARCA2P51531 1590 aa9.3□□□□□ -0.92
SLC48A1-205ENST00000547002 EIF4G1Q04637 1599 aaKnown RBP9.29□□□□□ -0.92
SLC48A1-205ENST00000547002 ATAD2BQ9ULI0 1458 aa9.28□□□□□ -0.92
SLC48A1-205ENST00000547002 NCAPD3P42695 1498 aa9.24□□□□□ -0.93
SLC48A1-205ENST00000547002 LOC105371045A0A1W2PR82 267 aa9.21□□□□□ -0.94
SLC48A1-205ENST00000547002 PLPPR3Q6T4P5 718 aa9.2□□□□□ -0.94
SLC48A1-205ENST00000547002 EEA1Q15075 1411 aa9.2□□□□□ -0.94
SLC48A1-205ENST00000547002 HMGXB3Q12766 1538 aa9.2□□□□□ -0.94
SLC48A1-205ENST00000547002 ERCC6Q03468 1493 aa9.19□□□□□ -0.94
SLC48A1-205ENST00000547002 BAZ1BQ9UIG0 1483 aaKnown RBP9.19□□□□□ -0.94
SLC48A1-205ENST00000547002 TRIM26Q12899 539 aaPredicted RBP9.1□□□□□ -0.95
SLC48A1-205ENST00000547002 WRNQ14191 1432 aaPredicted RBP eCLIP9.1□□□□□ -0.954e-7■■■■■ 80.6
SLC48A1-205ENST00000547002 CSRNP3Q8WYN3 585 aa9.08□□□□□ -0.96
SLC48A1-205ENST00000547002 ABCC8Q09428 1581 aa9.06□□□□□ -0.96
SLC48A1-205ENST00000547002 CFTRP13569 1480 aa9.05□□□□□ -0.96
SLC48A1-205ENST00000547002 TNIKQ9UKE5 1360 aa9.05□□□□□ -0.96
SLC48A1-205ENST00000547002 MSH5O43196 834 aa9.05□□□□□ -0.96
SLC48A1-205ENST00000547002 PIAS4Q8N2W9 510 aaPredicted RBP9.05□□□□□ -0.96
SLC48A1-205ENST00000547002 FAM9AQ8IZU1 332 aaPredicted RBP9.02□□□□□ -0.97
SLC48A1-205ENST00000547002 TOP2BQ02880 1626 aa9.02□□□□□ -0.97
SLC48A1-205ENST00000547002 HRCP23327 699 aa9.01□□□□□ -0.97
SLC48A1-205ENST00000547002 PPP6R1Q9UPN7 881 aa9.01□□□□□ -0.97
SLC48A1-205ENST00000547002 SOGA1O94964 1423 aa9□□□□□ -0.97
SLC48A1-205ENST00000547002 ADRA2BP18089 450 aa9□□□□□ -0.97
SLC48A1-205ENST00000547002 PCGF6Q9BYE7 350 aa9□□□□□ -0.97
SLC48A1-205ENST00000547002 BIVM-ERCC5R4GMW8 1640 aa9□□□□□ -0.97
SLC48A1-205ENST00000547002 SYNJ1O43426 1573 aa8.98□□□□□ -0.97
SLC48A1-205ENST00000547002 KIF21BO75037 1637 aa8.98□□□□□ -0.97
SLC48A1-205ENST00000547002 CADPSQ9ULU8 1353 aa8.98□□□□□ -0.97
SLC48A1-205ENST00000547002 ILDR1Q86SU0 546 aaPredicted RBP8.97□□□□□ -0.97
SLC48A1-205ENST00000547002 PRDM2Q13029 1718 aa8.97□□□□□ -0.97
SLC48A1-205ENST00000547002 GOLGA3Q08378 1498 aa8.96□□□□□ -0.97
SLC48A1-205ENST00000547002 CEP164Q9UPV0 1460 aa8.96□□□□□ -0.97
SLC48A1-205ENST00000547002 ZEB1P37275 1124 aaPredicted RBP8.93□□□□□ -0.98
SLC48A1-205ENST00000547002 OSCARQ8IYS5 282 aa8.93□□□□□ -0.98
SLC48A1-205ENST00000547002 RUSC2Q8N2Y8 1516 aa8.93□□□□□ -0.98
SLC48A1-205ENST00000547002 TRHP20396 242 aaPredicted RBP8.92□□□□□ -0.98
SLC48A1-205ENST00000547002 ERICH3Q5RHP9 1530 aa8.91□□□□□ -0.98
SLC48A1-205ENST00000547002 CEP162Q5TB80 1403 aa8.91□□□□□ -0.98
SLC48A1-205ENST00000547002 PRXQ9BXM0 1461 aa8.89□□□□□ -0.99
SLC48A1-205ENST00000547002 CUX1P39880 1505 aa8.89□□□□□ -0.99
SLC48A1-205ENST00000547002 KIF27Q86VH2 1401 aa8.88□□□□□ -0.99
SLC48A1-205ENST00000547002 UBTFP17480 764 aaKnown RBP8.88□□□□□ -0.99
SLC48A1-205ENST00000547002 POTEDQ86YR6 584 aa8.87□□□□□ -0.99
SLC48A1-205ENST00000547002 THOC2Q8NI27 1593 aaKnown RBP8.84□□□□□ -0.99
SLC48A1-205ENST00000547002 LAMC3Q9Y6N6 1575 aa8.83□□□□□ -1
SLC48A1-205ENST00000547002 CLIP1P30622 1438 aa8.81□□□□□ -1
SLC48A1-205ENST00000547002 IGF1RP08069 1367 aa8.81□□□□□ -1
SLC48A1-205ENST00000547002 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
SLC48A1-205ENST00000547002 RAPGEF2Q9Y4G8 1499 aa8.81□□□□□ -1
SLC48A1-205ENST00000547002 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
SLC48A1-205ENST00000547002 DNMBPQ6XZF7 1577 aa8.78□□□□□ -1
SLC48A1-205ENST00000547002 RIMBP3CA6NJZ7 1639 aa8.78□□□□□ -1
SLC48A1-205ENST00000547002 RIMBP3BA6NNM3 1639 aa8.78□□□□□ -1
SLC48A1-205ENST00000547002 NESP48681 1621 aa8.78□□□□□ -1
SLC48A1-205ENST00000547002 RIMBP3Q9UFD9 1639 aa8.78□□□□□ -1
SLC48A1-205ENST00000547002 PDS5BQ9NTI5 1447 aa8.78□□□□□ -1
SLC48A1-205ENST00000547002 ABCA10Q8WWZ4 1543 aa8.76□□□□□ -1.01
SLC48A1-205ENST00000547002 FGD5Q6ZNL6 1462 aa8.76□□□□□ -1.01
SLC48A1-205ENST00000547002 EHMT2Q96KQ7 1210 aa8.75□□□□□ -1.01
SLC48A1-205ENST00000547002 TOPBP1Q92547 1522 aa8.75□□□□□ -1.01
SLC48A1-205ENST00000547002 CARMIL1Q5VZK9 1371 aa8.74□□□□□ -1.01
SLC48A1-205ENST00000547002 APLP2Q06481 763 aa8.73□□□□□ -1.01
SLC48A1-205ENST00000547002 CYB5RLQ6IPT4 315 aa8.73□□□□□ -1.01
SLC48A1-205ENST00000547002 MAP3K1Q13233 1512 aa8.73□□□□□ -1.01
SLC48A1-205ENST00000547002 ARHGEF11O15085 1522 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms