RNA–Protein interactions for RNA: ENST00000546299.1

DENND5B-207, Transcript of DENN domain containing 5B, humanhuman

TSL 1 (best)

Gene DENND5B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND5B-207ENST00000546299 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
DENND5B-207ENST00000546299 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
DENND5B-207ENST00000546299 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
DENND5B-207ENST00000546299 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
DENND5B-207ENST00000546299 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
DENND5B-207ENST00000546299 NISCHQ9Y2I1 1504 aa18.5■□□□□ 0.55
DENND5B-207ENST00000546299 FOXD1Q16676 465 aa18.02■□□□□ 0.48
DENND5B-207ENST00000546299 MSH5O43196 834 aa17.35■□□□□ 0.37
DENND5B-207ENST00000546299 PIAS4Q8N2W9 510 aaPredicted RBP16.53■□□□□ 0.24
DENND5B-207ENST00000546299 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
DENND5B-207ENST00000546299 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
DENND5B-207ENST00000546299 ADRA2BP18089 450 aa15.8■□□□□ 0.12
DENND5B-207ENST00000546299 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.09
DENND5B-207ENST00000546299 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
DENND5B-207ENST00000546299 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
DENND5B-207ENST00000546299 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
DENND5B-207ENST00000546299 DCAF8L2P0C7V8 631 aa15.17■□□□□ 0.02
DENND5B-207ENST00000546299 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
DENND5B-207ENST00000546299 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
DENND5B-207ENST00000546299 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
DENND5B-207ENST00000546299 ABCC9O60706 1549 aa15.01□□□□□ -0.01
DENND5B-207ENST00000546299 NACADO15069 1562 aa14.93□□□□□ -0.02
DENND5B-207ENST00000546299 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
DENND5B-207ENST00000546299 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
DENND5B-207ENST00000546299 RB1CC1Q8TDY2 1594 aa14.76□□□□□ -0.05
DENND5B-207ENST00000546299 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
DENND5B-207ENST00000546299 SUPT5HO00267 1087 aaKnown RBP14.66□□□□□ -0.06
DENND5B-207ENST00000546299 POTEHQ6S545 545 aa14.55□□□□□ -0.08
DENND5B-207ENST00000546299 SCAF1Q9H7N4 1312 aaKnown RBP14.54□□□□□ -0.08
DENND5B-207ENST00000546299 UNC13AQ9UPW8 1703 aa14.45□□□□□ -0.1
DENND5B-207ENST00000546299 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
DENND5B-207ENST00000546299 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
DENND5B-207ENST00000546299 DCAF8L1A6NGE4 600 aa14.39□□□□□ -0.11
DENND5B-207ENST00000546299 CECR2Q9BXF3 1484 aa14.34□□□□□ -0.11
DENND5B-207ENST00000546299 BICRAQ9NZM4 1560 aa14.3□□□□□ -0.12
DENND5B-207ENST00000546299 MROH2BQ7Z745 1585 aa14.28□□□□□ -0.12
DENND5B-207ENST00000546299 BAZ1AQ9NRL2 1556 aaPredicted RBP14.28□□□□□ -0.12
DENND5B-207ENST00000546299 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
DENND5B-207ENST00000546299 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
DENND5B-207ENST00000546299 WIZO95785 1651 aa14.17□□□□□ -0.14
DENND5B-207ENST00000546299 HOXD11P31277 338 aaPredicted RBP14.08□□□□□ -0.16
DENND5B-207ENST00000546299 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
DENND5B-207ENST00000546299 PEG3Q9GZU2 1588 aa14.03□□□□□ -0.16
DENND5B-207ENST00000546299 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
DENND5B-207ENST00000546299 ATAD2BQ9ULI0 1458 aa13.92□□□□□ -0.18
DENND5B-207ENST00000546299 DNAJC5BQ9UF47 199 aa13.9□□□□□ -0.18
DENND5B-207ENST00000546299 CCDC88BA6NC98 1476 aa13.9□□□□□ -0.18
DENND5B-207ENST00000546299 EIF4G1Q04637 1599 aaKnown RBP13.87□□□□□ -0.19
DENND5B-207ENST00000546299 BAZ1BQ9UIG0 1483 aaKnown RBP13.84□□□□□ -0.19
DENND5B-207ENST00000546299 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
DENND5B-207ENST00000546299 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
DENND5B-207ENST00000546299 HMGXB3Q12766 1538 aa13.78□□□□□ -0.2
DENND5B-207ENST00000546299 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
DENND5B-207ENST00000546299 ABCC8Q09428 1581 aa13.64□□□□□ -0.23
DENND5B-207ENST00000546299 CC2D2AQ9P2K1 1620 aa13.61□□□□□ -0.23
DENND5B-207ENST00000546299 LOC105371045A0A1W2PR82 267 aa13.58□□□□□ -0.24
DENND5B-207ENST00000546299 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
DENND5B-207ENST00000546299 CFTRP13569 1480 aa13.51□□□□□ -0.25
DENND5B-207ENST00000546299 FAM9AQ8IZU1 332 aaPredicted RBP13.5□□□□□ -0.25
DENND5B-207ENST00000546299 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
DENND5B-207ENST00000546299 EEA1Q15075 1411 aa13.47□□□□□ -0.25
DENND5B-207ENST00000546299 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
DENND5B-207ENST00000546299 PRDM2Q13029 1718 aa13.45□□□□□ -0.26
DENND5B-207ENST00000546299 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
DENND5B-207ENST00000546299 TOP2BQ02880 1626 aa13.43□□□□□ -0.26
DENND5B-207ENST00000546299 SOGA1O94964 1423 aa13.42□□□□□ -0.26
DENND5B-207ENST00000546299 PPP4R3CPQ6ZMV5 832 aa13.42□□□□□ -0.26
DENND5B-207ENST00000546299 BIVM-ERCC5R4GMW8 1640 aa13.41□□□□□ -0.26
DENND5B-207ENST00000546299 CUX1P39880 1505 aa13.35□□□□□ -0.27
DENND5B-207ENST00000546299 DSG3P32926 999 aa13.35□□□□□ -0.27
DENND5B-207ENST00000546299 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
DENND5B-207ENST00000546299 RUSC2Q8N2Y8 1516 aa13.35□□□□□ -0.27
DENND5B-207ENST00000546299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.27
DENND5B-207ENST00000546299 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
DENND5B-207ENST00000546299 FANCD2Q9BXW9 1451 aa13.28□□□□□ -0.28
DENND5B-207ENST00000546299 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.28
DENND5B-207ENST00000546299 GOLGA3Q08378 1498 aa13.27□□□□□ -0.29
DENND5B-207ENST00000546299 KIF21BO75037 1637 aa13.27□□□□□ -0.29
DENND5B-207ENST00000546299 TNIKQ9UKE5 1360 aa13.26□□□□□ -0.29
DENND5B-207ENST00000546299 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
DENND5B-207ENST00000546299 NESP48681 1621 aa13.23□□□□□ -0.29
DENND5B-207ENST00000546299 KIF27Q86VH2 1401 aa13.21□□□□□ -0.3
DENND5B-207ENST00000546299 DNMBPQ6XZF7 1577 aa13.19□□□□□ -0.3
DENND5B-207ENST00000546299 CEP162Q5TB80 1403 aa13.19□□□□□ -0.3
DENND5B-207ENST00000546299 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
DENND5B-207ENST00000546299 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
DENND5B-207ENST00000546299 UBTFP17480 764 aaKnown RBP13.17□□□□□ -0.3
DENND5B-207ENST00000546299 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
DENND5B-207ENST00000546299 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
DENND5B-207ENST00000546299 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
DENND5B-207ENST00000546299 RAPGEF2Q9Y4G8 1499 aa13.15□□□□□ -0.3
DENND5B-207ENST00000546299 CUX2O14529 1486 aa13.12□□□□□ -0.31
DENND5B-207ENST00000546299 PCGF6Q9BYE7 350 aa13.12□□□□□ -0.31
DENND5B-207ENST00000546299 TRIM26Q12899 539 aaPredicted RBP13.11□□□□□ -0.31
DENND5B-207ENST00000546299 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
DENND5B-207ENST00000546299 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
DENND5B-207ENST00000546299 CAPN15O75808 1086 aa13.1□□□□□ -0.31
DENND5B-207ENST00000546299 URB2Q14146 1524 aaKnown RBP13.09□□□□□ -0.31
DENND5B-207ENST00000546299 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
DENND5B-207ENST00000546299 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms