RNA–Protein interactions for RNA: ENST00000545620.5

SMAD5-212, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD5, Length 6,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-212ENST00000545620 NISCHQ9Y2I1 1504 aa10.63□□□□□ -0.71
SMAD5-212ENST00000545620 CCDC180Q9P1Z9 1646 aa9.06□□□□□ -0.96
SMAD5-212ENST00000545620 ZCCHC6Q5VYS8 1495 aaKnown RBP8.99□□□□□ -0.97
SMAD5-212ENST00000545620 SHROOM4Q9ULL8 1493 aa8.94□□□□□ -0.98
SMAD5-212ENST00000545620 DCAF1Q9Y4B6 1507 aa8.64□□□□□ -1.03
SMAD5-212ENST00000545620 DCAF8L2P0C7V8 631 aa8.61□□□□□ -1.03
SMAD5-212ENST00000545620 ABCC9O60706 1549 aa8.59□□□□□ -1.03
SMAD5-212ENST00000545620 SCRIBQ14160 1630 aa8.56□□□□□ -1.04
SMAD5-212ENST00000545620 MYO15BQ96JP2 1530 aa8.54□□□□□ -1.04
SMAD5-212ENST00000545620 UNC13AQ9UPW8 1703 aa8.54□□□□□ -1.04
SMAD5-212ENST00000545620 SUPT5HO00267 1087 aaKnown RBP8.53□□□□□ -1.04
SMAD5-212ENST00000545620 CECR2Q9BXF3 1484 aa8.46□□□□□ -1.05
SMAD5-212ENST00000545620 RSF1Q96T23 1441 aaPredicted RBP8.38□□□□□ -1.07
SMAD5-212ENST00000545620 MROH2BQ7Z745 1585 aa8.37□□□□□ -1.07
SMAD5-212ENST00000545620 RB1CC1Q8TDY2 1594 aa8.37□□□□□ -1.07
SMAD5-212ENST00000545620 BICRAQ9NZM4 1560 aa8.36□□□□□ -1.07
SMAD5-212ENST00000545620 WIZO95785 1651 aa8.35□□□□□ -1.07
SMAD5-212ENST00000545620 NACADO15069 1562 aa8.33□□□□□ -1.08
SMAD5-212ENST00000545620 CHIC1Q5VXU3 224 aa8.31□□□□□ -1.08
SMAD5-212ENST00000545620 EIF4G1Q04637 1599 aaKnown RBP8.26□□□□□ -1.09
SMAD5-212ENST00000545620 PABPN1Q86U42 306 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMAD5-212ENST00000545620 SMARCA4P51532 1647 aa8.16□□□□□ -1.1
SMAD5-212ENST00000545620 LOC105371045A0A1W2PR82 267 aa8.16□□□□□ -1.1
SMAD5-212ENST00000545620 BAZ1AQ9NRL2 1556 aaPredicted RBP8.13□□□□□ -1.11
SMAD5-212ENST00000545620 MYT1Q01538 1121 aa8.1□□□□□ -1.11
SMAD5-212ENST00000545620 SMARCA2P51531 1590 aa8.09□□□□□ -1.11
SMAD5-212ENST00000545620 ABCC8Q09428 1581 aa8.08□□□□□ -1.12
SMAD5-212ENST00000545620 CCDC88BA6NC98 1476 aa8.07□□□□□ -1.12
SMAD5-212ENST00000545620 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
SMAD5-212ENST00000545620 TOP2AP11388 1531 aaKnown RBP8.02□□□□□ -1.13
SMAD5-212ENST00000545620 RUSC2Q8N2Y8 1516 aa8.02□□□□□ -1.13
SMAD5-212ENST00000545620 DNAJC5BQ9UF47 199 aa8□□□□□ -1.13
SMAD5-212ENST00000545620 ATAD2BQ9ULI0 1458 aa7.96□□□□□ -1.14
SMAD5-212ENST00000545620 SYNJ1O43426 1573 aa7.94□□□□□ -1.14
SMAD5-212ENST00000545620 SOGA1O94964 1423 aa7.92□□□□□ -1.14
SMAD5-212ENST00000545620 EHMT2Q96KQ7 1210 aa7.91□□□□□ -1.14
SMAD5-212ENST00000545620 FAM9AQ8IZU1 332 aaPredicted RBP7.9□□□□□ -1.15
SMAD5-212ENST00000545620 TRIM41Q8WV44 630 aa7.82□□□□□ -1.16
SMAD5-212ENST00000545620 CC2D2AQ9P2K1 1620 aa7.8□□□□□ -1.16
SMAD5-212ENST00000545620 BAZ1BQ9UIG0 1483 aaKnown RBP7.8□□□□□ -1.16
SMAD5-212ENST00000545620 NCAPD3P42695 1498 aa7.78□□□□□ -1.16
SMAD5-212ENST00000545620 CUX1P39880 1505 aa7.78□□□□□ -1.16
SMAD5-212ENST00000545620 PPARGC1BQ86YN6 1023 aaKnown RBP7.77□□□□□ -1.17
SMAD5-212ENST00000545620 PCGF6Q9BYE7 350 aa7.76□□□□□ -1.17
SMAD5-212ENST00000545620 NESP48681 1621 aa7.76□□□□□ -1.17
SMAD5-212ENST00000545620 HMGXB3Q12766 1538 aa7.76□□□□□ -1.17
SMAD5-212ENST00000545620 BIVM-ERCC5R4GMW8 1640 aa7.74□□□□□ -1.17
SMAD5-212ENST00000545620 TOP2BQ02880 1626 aa7.73□□□□□ -1.17
SMAD5-212ENST00000545620 WRNQ14191 1432 aaPredicted RBP eCLIP7.72□□□□□ -1.17
SMAD5-212ENST00000545620 CFTRP13569 1480 aa7.71□□□□□ -1.18
SMAD5-212ENST00000545620 RAPGEF2Q9Y4G8 1499 aa7.7□□□□□ -1.18
SMAD5-212ENST00000545620 PRDM2Q13029 1718 aa7.69□□□□□ -1.18
SMAD5-212ENST00000545620 CEP162Q5TB80 1403 aa7.63□□□□□ -1.19
SMAD5-212ENST00000545620 KIF21AQ7Z4S6 1674 aa7.62□□□□□ -1.19
SMAD5-212ENST00000545620 KIF21BO75037 1637 aa7.61□□□□□ -1.19
SMAD5-212ENST00000545620 PELP1Q8IZL8 1130 aaKnown RBP7.61□□□□□ -1.19
SMAD5-212ENST00000545620 HRCP23327 699 aa7.61□□□□□ -1.19
SMAD5-212ENST00000545620 PRXQ9BXM0 1461 aa7.6□□□□□ -1.19
SMAD5-212ENST00000545620 RAD54L2Q9Y4B4 1467 aa7.59□□□□□ -1.19
SMAD5-212ENST00000545620 URB2Q14146 1524 aaKnown RBP7.59□□□□□ -1.19
SMAD5-212ENST00000545620 TTBK1Q5TCY1 1321 aaPredicted RBP7.58□□□□□ -1.2
SMAD5-212ENST00000545620 WDR97A6NE52 1622 aa7.58□□□□□ -1.2
SMAD5-212ENST00000545620 CSRNP3Q8WYN3 585 aa7.58□□□□□ -1.2
SMAD5-212ENST00000545620 LRRIQ1Q96JM4 1722 aa7.58□□□□□ -1.2
SMAD5-212ENST00000545620 ARAP1Q96P48 1450 aa7.57□□□□□ -1.2
SMAD5-212ENST00000545620 CADPSQ9ULU8 1353 aa7.56□□□□□ -1.2
SMAD5-212ENST00000545620 FGD5Q6ZNL6 1462 aa7.56□□□□□ -1.2
SMAD5-212ENST00000545620 TNIKQ9UKE5 1360 aa7.56□□□□□ -1.2
SMAD5-212ENST00000545620 RANGAP1P46060 587 aaPredicted RBP7.55□□□□□ -1.2
SMAD5-212ENST00000545620 IGF1RP08069 1367 aa7.53□□□□□ -1.2
SMAD5-212ENST00000545620 POLA1P09884 1462 aaPredicted RBP7.53□□□□□ -1.2
SMAD5-212ENST00000545620 FANCD2Q9BXW9 1451 aa7.53□□□□□ -1.2
SMAD5-212ENST00000545620 CLIP1P30622 1438 aa7.52□□□□□ -1.21
SMAD5-212ENST00000545620 TOPBP1Q92547 1522 aa7.52□□□□□ -1.21
SMAD5-212ENST00000545620 TRIM26Q12899 539 aaPredicted RBP7.51□□□□□ -1.21
SMAD5-212ENST00000545620 GOLGA3Q08378 1498 aa7.51□□□□□ -1.21
SMAD5-212ENST00000545620 TARBP1Q13395 1621 aaKnown RBP7.51□□□□□ -1.21
SMAD5-212ENST00000545620 KANK4Q5T7N3 995 aaPredicted RBP7.5□□□□□ -1.21
SMAD5-212ENST00000545620 ARHGAP35Q9NRY4 1499 aa7.5□□□□□ -1.21
SMAD5-212ENST00000545620 CUX2O14529 1486 aa7.48□□□□□ -1.21
SMAD5-212ENST00000545620 CEP164Q9UPV0 1460 aa7.48□□□□□ -1.21
SMAD5-212ENST00000545620 ABCA5Q8WWZ7 1642 aa7.48□□□□□ -1.21
SMAD5-212ENST00000545620 DNMBPQ6XZF7 1577 aa7.46□□□□□ -1.21
SMAD5-212ENST00000545620 ERICH3Q5RHP9 1530 aa7.46□□□□□ -1.21
SMAD5-212ENST00000545620 ERICH6Q7L0X2 663 aa7.45□□□□□ -1.22
SMAD5-212ENST00000545620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.45□□□□□ -1.22
SMAD5-212ENST00000545620 ZNF608Q9ULD9 1512 aaPredicted RBP7.45□□□□□ -1.22
SMAD5-212ENST00000545620 EEA1Q15075 1411 aa7.45□□□□□ -1.22
SMAD5-212ENST00000545620 ABCA10Q8WWZ4 1543 aa7.44□□□□□ -1.22
SMAD5-212ENST00000545620 LAMC3Q9Y6N6 1575 aa7.43□□□□□ -1.22
SMAD5-212ENST00000545620 TDRD9Q8NDG6 1382 aaKnown RBP7.42□□□□□ -1.22
SMAD5-212ENST00000545620 UBTFP17480 764 aaKnown RBP7.42□□□□□ -1.22
SMAD5-212ENST00000545620 VPS8Q8N3P4 1428 aa7.42□□□□□ -1.22
SMAD5-212ENST00000545620 MAGI3Q5TCQ9 1506 aa7.4□□□□□ -1.22
SMAD5-212ENST00000545620 THOC2Q8NI27 1593 aaKnown RBP7.39□□□□□ -1.23
SMAD5-212ENST00000545620 AQRO60306 1485 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMAD5-212ENST00000545620 PCF11O94913 1555 aaKnown RBP7.39□□□□□ -1.23
SMAD5-212ENST00000545620 PBRM1Q86U86 1689 aa7.39□□□□□ -1.23
SMAD5-212ENST00000545620 KIF27Q86VH2 1401 aa7.39□□□□□ -1.23
SMAD5-212ENST00000545620 CTTNBP2Q8WZ74 1663 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms