RNA–Protein interactions for RNA: ENST00000545243.1

RIC1-206, Transcript of RIC1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RIC1, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIC1-206ENST00000545243 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
RIC1-206ENST00000545243 MYT1Q01538 1121 aa13.1□□□□□ -0.31
RIC1-206ENST00000545243 NISCHQ9Y2I1 1504 aa13□□□□□ -0.33
RIC1-206ENST00000545243 HRCP23327 699 aa12.67□□□□□ -0.38
RIC1-206ENST00000545243 TTBK1Q5TCY1 1321 aaPredicted RBP12.59□□□□□ -0.39
RIC1-206ENST00000545243 PPARGC1BQ86YN6 1023 aaKnown RBP12.29□□□□□ -0.44
RIC1-206ENST00000545243 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
RIC1-206ENST00000545243 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
RIC1-206ENST00000545243 MYO15BQ96JP2 1530 aa12.03□□□□□ -0.48
RIC1-206ENST00000545243 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
RIC1-206ENST00000545243 ERICH6Q7L0X2 663 aa11.9□□□□□ -0.5
RIC1-206ENST00000545243 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
RIC1-206ENST00000545243 BCL11AQ9H165 835 aa11.86□□□□□ -0.51
RIC1-206ENST00000545243 CCDC180Q9P1Z9 1646 aa11.85□□□□□ -0.51
RIC1-206ENST00000545243 ZEB1P37275 1124 aaPredicted RBP11.82□□□□□ -0.52
RIC1-206ENST00000545243 APLP2Q06481 763 aa11.81□□□□□ -0.52
RIC1-206ENST00000545243 ACIN1Q9UKV3 1341 aaKnown RBP11.77□□□□□ -0.52
RIC1-206ENST00000545243 SUPT5HO00267 1087 aaKnown RBP11.76□□□□□ -0.53
RIC1-206ENST00000545243 CHIC1Q5VXU3 224 aa11.75□□□□□ -0.53
RIC1-206ENST00000545243 TRIM26Q12899 539 aaPredicted RBP11.74□□□□□ -0.53
RIC1-206ENST00000545243 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
RIC1-206ENST00000545243 NEUROD1Q13562 356 aa11.68□□□□□ -0.54
RIC1-206ENST00000545243 FAM9AQ8IZU1 332 aaPredicted RBP11.68□□□□□ -0.54
RIC1-206ENST00000545243 SHROOM4Q9ULL8 1493 aa11.68□□□□□ -0.54
RIC1-206ENST00000545243 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
RIC1-206ENST00000545243 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
RIC1-206ENST00000545243 LOC105371045A0A1W2PR82 267 aa11.45□□□□□ -0.58
RIC1-206ENST00000545243 ANP32EQ9BTT0 268 aa11.42□□□□□ -0.58
RIC1-206ENST00000545243 DIEXFQ68CQ4 756 aaKnown RBP11.35□□□□□ -0.59
RIC1-206ENST00000545243 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
RIC1-206ENST00000545243 DAXXQ9UER7 740 aaPredicted RBP11.18□□□□□ -0.62
RIC1-206ENST00000545243 CCER1Q8TC90 406 aaPredicted RBP11.17□□□□□ -0.62
RIC1-206ENST00000545243 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
RIC1-206ENST00000545243 YTHDC1Q96MU7 727 aaKnown RBP11.17□□□□□ -0.62
RIC1-206ENST00000545243 ZCCHC6Q5VYS8 1495 aaKnown RBP11.16□□□□□ -0.62
RIC1-206ENST00000545243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.14□□□□□ -0.63
RIC1-206ENST00000545243 CLSPNQ9HAW4 1339 aa11.12□□□□□ -0.63
RIC1-206ENST00000545243 TSHZ2Q9NRE2 1034 aa11.08□□□□□ -0.64
RIC1-206ENST00000545243 EIF5BO60841 1220 aaKnown RBP11.07□□□□□ -0.64
RIC1-206ENST00000545243 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
RIC1-206ENST00000545243 UBE2Q2Q8WVN8 375 aa11.06□□□□□ -0.64
RIC1-206ENST00000545243 SUPT16HQ9Y5B9 1047 aaKnown RBP11.03□□□□□ -0.64
RIC1-206ENST00000545243 MIER1Q8N108 512 aa11□□□□□ -0.65
RIC1-206ENST00000545243 ANO8Q9HCE9 1232 aaPredicted RBP10.95□□□□□ -0.66
RIC1-206ENST00000545243 MYT1LQ9UL68 1186 aa10.91□□□□□ -0.66
RIC1-206ENST00000545243 ERICH6BQ5W0A0 696 aa10.88□□□□□ -0.67
RIC1-206ENST00000545243 EHMT2Q96KQ7 1210 aa10.78□□□□□ -0.68
RIC1-206ENST00000545243 RBM19Q9Y4C8 960 aaKnown RBP10.78□□□□□ -0.68
RIC1-206ENST00000545243 PKNOX2Q96KN3 472 aa10.75□□□□□ -0.69
RIC1-206ENST00000545243 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
RIC1-206ENST00000545243 WRNQ14191 1432 aaPredicted RBP eCLIP10.72□□□□□ -0.69
RIC1-206ENST00000545243 MSH5O43196 834 aa10.71□□□□□ -0.69
RIC1-206ENST00000545243 ABCC9O60706 1549 aa10.7□□□□□ -0.7
RIC1-206ENST00000545243 BCANQ96GW7 911 aa10.7□□□□□ -0.7
RIC1-206ENST00000545243 PLEKHG5O94827 1062 aa10.7□□□□□ -0.7
RIC1-206ENST00000545243 AEBP2Q6ZN18 517 aaPredicted RBP10.69□□□□□ -0.7
RIC1-206ENST00000545243 PODXL2Q9NZ53 605 aa10.69□□□□□ -0.7
RIC1-206ENST00000545243 DEKP35659 375 aaKnown RBP10.66□□□□□ -0.7
RIC1-206ENST00000545243 FANCIQ9NVI1 1328 aa10.65□□□□□ -0.7
RIC1-206ENST00000545243 FKBP8Q14318 412 aa10.65□□□□□ -0.71
RIC1-206ENST00000545243 CCDC136Q96JN2 1154 aa10.63□□□□□ -0.71
RIC1-206ENST00000545243 RB1CC1Q8TDY2 1594 aa10.63□□□□□ -0.71
RIC1-206ENST00000545243 DCAF8L2P0C7V8 631 aa10.61□□□□□ -0.71
RIC1-206ENST00000545243 NEFLP07196 543 aa10.59□□□□□ -0.71
RIC1-206ENST00000545243 RSF1Q96T23 1441 aaPredicted RBP10.57□□□□□ -0.72
RIC1-206ENST00000545243 CEP162Q5TB80 1403 aa10.55□□□□□ -0.72
RIC1-206ENST00000545243 ITGAEP38570 1179 aa10.53□□□□□ -0.72
RIC1-206ENST00000545243 HNRNPUL2Q1KMD3 747 aaKnown RBP10.49□□□□□ -0.73
RIC1-206ENST00000545243 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.48□□□□□ -0.73
RIC1-206ENST00000545243 CDK11AQ9UQ88 783 aaPredicted RBP10.47□□□□□ -0.73
RIC1-206ENST00000545243 KCNH8Q96L42 1107 aa10.46□□□□□ -0.73
RIC1-206ENST00000545243 TNIKQ9UKE5 1360 aa10.45□□□□□ -0.74
RIC1-206ENST00000545243 GLIPR1L2Q4G1C9 344 aa10.44□□□□□ -0.74
RIC1-206ENST00000545243 NBR1Q14596 966 aa10.4□□□□□ -0.74
RIC1-206ENST00000545243 IL27Q8NEV9 243 aa10.39□□□□□ -0.75
RIC1-206ENST00000545243 NOP58Q9Y2X3 529 aaKnown RBP10.39□□□□□ -0.75
RIC1-206ENST00000545243 DHX57Q6P158 1386 aaKnown RBP10.39□□□□□ -0.75
RIC1-206ENST00000545243 RTL5Q5HYW3 569 aaPredicted RBP10.36□□□□□ -0.75
RIC1-206ENST00000545243 EIF4G1Q04637 1599 aaKnown RBP10.36□□□□□ -0.75
RIC1-206ENST00000545243 RTN4Q9NQC3 1192 aaKnown RBP10.35□□□□□ -0.75
RIC1-206ENST00000545243 TRIM52Q96A61 297 aa10.32□□□□□ -0.76
RIC1-206ENST00000545243 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
RIC1-206ENST00000545243 NACADO15069 1562 aa10.31□□□□□ -0.76
RIC1-206ENST00000545243 C11orf95C9JLR9 678 aaPredicted RBP10.31□□□□□ -0.76
RIC1-206ENST00000545243 CCER2I3L3R5 266 aa10.3□□□□□ -0.76
RIC1-206ENST00000545243 PAK3O75914 559 aaPredicted RBP10.3□□□□□ -0.76
RIC1-206ENST00000545243 RSPH6AQ9H0K4 717 aa10.3□□□□□ -0.76
RIC1-206ENST00000545243 ABCC8Q09428 1581 aa10.3□□□□□ -0.76
RIC1-206ENST00000545243 PDE4CQ08493 712 aa10.29□□□□□ -0.76
RIC1-206ENST00000545243 EEA1Q15075 1411 aa10.29□□□□□ -0.76
RIC1-206ENST00000545243 GOLGA3Q08378 1498 aa10.29□□□□□ -0.76
RIC1-206ENST00000545243 UBTFP17480 764 aaKnown RBP10.27□□□□□ -0.77
RIC1-206ENST00000545243 PDIA4P13667 645 aaKnown RBP10.26□□□□□ -0.77
RIC1-206ENST00000545243 FGD1P98174 961 aa10.26□□□□□ -0.77
RIC1-206ENST00000545243 CCDC88BA6NC98 1476 aa10.26□□□□□ -0.77
RIC1-206ENST00000545243 PPP4R2Q9NY27 417 aa10.25□□□□□ -0.77
RIC1-206ENST00000545243 DDX10Q13206 875 aaKnown RBP10.25□□□□□ -0.77
RIC1-206ENST00000545243 IRX6P78412 446 aaPredicted RBP10.24□□□□□ -0.77
RIC1-206ENST00000545243 VPS8Q8N3P4 1428 aa10.24□□□□□ -0.77
RIC1-206ENST00000545243 SCRIBQ14160 1630 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms