RNA–Protein interactions for RNA: ENST00000545012.5

TRIM46-210, Transcript of tripartite motif containing 46, humanhuman

TSL 2 BASIC

Gene TRIM46, Length 2,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-210ENST00000545012 NISCHQ9Y2I1 1504 aa30.78■■■□□ 2.52
TRIM46-210ENST00000545012 CCDC180Q9P1Z9 1646 aa26.8■■□□□ 1.88
TRIM46-210ENST00000545012 SHROOM4Q9ULL8 1493 aa25.89■■□□□ 1.74
TRIM46-210ENST00000545012 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
TRIM46-210ENST00000545012 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
TRIM46-210ENST00000545012 ABCC9O60706 1549 aa25.73■■□□□ 1.71
TRIM46-210ENST00000545012 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
TRIM46-210ENST00000545012 DCAF1Q9Y4B6 1507 aa25.34■■□□□ 1.65
TRIM46-210ENST00000545012 PELP1Q8IZL8 1130 aaKnown RBP25.23■■□□□ 1.63
TRIM46-210ENST00000545012 MYO15BQ96JP2 1530 aa25.08■■□□□ 1.61
TRIM46-210ENST00000545012 NACADO15069 1562 aa25.07■■□□□ 1.6
TRIM46-210ENST00000545012 RB1CC1Q8TDY2 1594 aa24.93■■□□□ 1.58
TRIM46-210ENST00000545012 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
TRIM46-210ENST00000545012 MYT1Q01538 1121 aa24.57■■□□□ 1.52
TRIM46-210ENST00000545012 HRCP23327 699 aa24.53■■□□□ 1.52
TRIM46-210ENST00000545012 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.51
TRIM46-210ENST00000545012 PABPN1Q86U42 306 aaKnown RBP eCLIP24.32■■□□□ 1.48
TRIM46-210ENST00000545012 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
TRIM46-210ENST00000545012 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
TRIM46-210ENST00000545012 PCGF6Q9BYE7 350 aa24.09■■□□□ 1.45
TRIM46-210ENST00000545012 CECR2Q9BXF3 1484 aa23.98■■□□□ 1.43
TRIM46-210ENST00000545012 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.43
TRIM46-210ENST00000545012 PPARGC1BQ86YN6 1023 aaKnown RBP23.95■■□□□ 1.43
TRIM46-210ENST00000545012 LOC105371045A0A1W2PR82 267 aa23.94■■□□□ 1.42
TRIM46-210ENST00000545012 BAZ1AQ9NRL2 1556 aaPredicted RBP23.8■■□□□ 1.4
TRIM46-210ENST00000545012 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
TRIM46-210ENST00000545012 SCAF1Q9H7N4 1312 aaKnown RBP23.78■■□□□ 1.4
TRIM46-210ENST00000545012 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
TRIM46-210ENST00000545012 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
TRIM46-210ENST00000545012 WIZO95785 1651 aa23.59■■□□□ 1.37
TRIM46-210ENST00000545012 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
TRIM46-210ENST00000545012 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
TRIM46-210ENST00000545012 TTBK1Q5TCY1 1321 aaPredicted RBP23.39■■□□□ 1.34
TRIM46-210ENST00000545012 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
TRIM46-210ENST00000545012 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
TRIM46-210ENST00000545012 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
TRIM46-210ENST00000545012 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
TRIM46-210ENST00000545012 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
TRIM46-210ENST00000545012 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
TRIM46-210ENST00000545012 TRIM26Q12899 539 aaPredicted RBP23.24■■□□□ 1.31
TRIM46-210ENST00000545012 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
TRIM46-210ENST00000545012 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
TRIM46-210ENST00000545012 CCDC88BA6NC98 1476 aa23.12■■□□□ 1.29
TRIM46-210ENST00000545012 HMGXB3Q12766 1538 aa23.08■■□□□ 1.28
TRIM46-210ENST00000545012 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
TRIM46-210ENST00000545012 ACIN1Q9UKV3 1341 aaKnown RBP22.86■■□□□ 1.25
TRIM46-210ENST00000545012 BCL11AQ9H165 835 aa22.83■■□□□ 1.25
TRIM46-210ENST00000545012 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
TRIM46-210ENST00000545012 PRKCSHP14314 528 aaPredicted RBP22.77■■□□□ 1.23
TRIM46-210ENST00000545012 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
TRIM46-210ENST00000545012 GTF3C3Q9Y5Q9 886 aa22.71■■□□□ 1.23
TRIM46-210ENST00000545012 SOGA1O94964 1423 aa22.65■■□□□ 1.22
TRIM46-210ENST00000545012 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
TRIM46-210ENST00000545012 ZEB1P37275 1124 aaPredicted RBP22.62■■□□□ 1.21
TRIM46-210ENST00000545012 CFTRP13569 1480 aa22.61■■□□□ 1.21
TRIM46-210ENST00000545012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
TRIM46-210ENST00000545012 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
TRIM46-210ENST00000545012 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
TRIM46-210ENST00000545012 UBTFP17480 764 aaKnown RBP22.56■■□□□ 1.2
TRIM46-210ENST00000545012 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
TRIM46-210ENST00000545012 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
TRIM46-210ENST00000545012 NESP48681 1621 aa22.49■■□□□ 1.19
TRIM46-210ENST00000545012 EEA1Q15075 1411 aa22.48■■□□□ 1.19
TRIM46-210ENST00000545012 CEP162Q5TB80 1403 aa22.46■■□□□ 1.19
TRIM46-210ENST00000545012 TNIKQ9UKE5 1360 aa22.43■■□□□ 1.18
TRIM46-210ENST00000545012 LAMC3Q9Y6N6 1575 aa22.39■■□□□ 1.18
TRIM46-210ENST00000545012 FANCD2Q9BXW9 1451 aa22.39■■□□□ 1.17
TRIM46-210ENST00000545012 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
TRIM46-210ENST00000545012 CCER1Q8TC90 406 aaPredicted RBP22.37■■□□□ 1.17
TRIM46-210ENST00000545012 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
TRIM46-210ENST00000545012 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
TRIM46-210ENST00000545012 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
TRIM46-210ENST00000545012 CEP164Q9UPV0 1460 aa22.27■■□□□ 1.16
TRIM46-210ENST00000545012 CUX1P39880 1505 aa22.25■■□□□ 1.15
TRIM46-210ENST00000545012 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
TRIM46-210ENST00000545012 RANGAP1P46060 587 aaPredicted RBP22.21■■□□□ 1.15
TRIM46-210ENST00000545012 ERICH6Q7L0X2 663 aa22.2■■□□□ 1.14
TRIM46-210ENST00000545012 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
TRIM46-210ENST00000545012 ANP32EQ9BTT0 268 aa22.15■■□□□ 1.14
TRIM46-210ENST00000545012 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
TRIM46-210ENST00000545012 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
TRIM46-210ENST00000545012 KIF21BO75037 1637 aa22.13■■□□□ 1.13
TRIM46-210ENST00000545012 CLIP1P30622 1438 aa22.11■■□□□ 1.13
TRIM46-210ENST00000545012 RAPGEF2Q9Y4G8 1499 aa22.1■■□□□ 1.13
TRIM46-210ENST00000545012 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
TRIM46-210ENST00000545012 DNMBPQ6XZF7 1577 aa22.09■■□□□ 1.13
TRIM46-210ENST00000545012 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.13
TRIM46-210ENST00000545012 APLP2Q06481 763 aa22.07■■□□□ 1.12
TRIM46-210ENST00000545012 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
TRIM46-210ENST00000545012 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
TRIM46-210ENST00000545012 MRC2Q9UBG0 1479 aa22■■□□□ 1.11
TRIM46-210ENST00000545012 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
TRIM46-210ENST00000545012 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
TRIM46-210ENST00000545012 CUX2O14529 1486 aa21.97■■□□□ 1.11
TRIM46-210ENST00000545012 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
TRIM46-210ENST00000545012 VPS8Q8N3P4 1428 aa21.95■■□□□ 1.1
TRIM46-210ENST00000545012 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
TRIM46-210ENST00000545012 PRXQ9BXM0 1461 aa21.86■■□□□ 1.09
TRIM46-210ENST00000545012 YTHDC1Q96MU7 727 aaKnown RBP21.85■■□□□ 1.09
TRIM46-210ENST00000545012 ABCA10Q8WWZ4 1543 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms