RNA–Protein interactions for RNA: ENST00000545001.2

AC135279.2-201, humanhuman

BASIC

Gene AC135279.2, Length 620 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC135279.2-201ENST00000545001 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
AC135279.2-201ENST00000545001 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
AC135279.2-201ENST00000545001 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
AC135279.2-201ENST00000545001 SENP3Q9H4L4 574 aaPredicted RBP22.56■■□□□ 1.2
AC135279.2-201ENST00000545001 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
AC135279.2-201ENST00000545001 FOXD1Q16676 465 aa21.08■□□□□ 0.97
AC135279.2-201ENST00000545001 CCDC180Q9P1Z9 1646 aa20.28■□□□□ 0.84
AC135279.2-201ENST00000545001 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
AC135279.2-201ENST00000545001 MSH5O43196 834 aa19.74■□□□□ 0.75
AC135279.2-201ENST00000545001 PIAS4Q8N2W9 510 aaPredicted RBP19.65■□□□□ 0.74
AC135279.2-201ENST00000545001 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
AC135279.2-201ENST00000545001 ADRA2BP18089 450 aa19.54■□□□□ 0.72
AC135279.2-201ENST00000545001 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
AC135279.2-201ENST00000545001 ABCC9O60706 1549 aa19.37■□□□□ 0.69
AC135279.2-201ENST00000545001 ZCCHC6Q5VYS8 1495 aaKnown RBP19.1■□□□□ 0.65
AC135279.2-201ENST00000545001 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
AC135279.2-201ENST00000545001 DCAF1Q9Y4B6 1507 aa19.06■□□□□ 0.64
AC135279.2-201ENST00000545001 NACADO15069 1562 aa19■□□□□ 0.63
AC135279.2-201ENST00000545001 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
AC135279.2-201ENST00000545001 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
AC135279.2-201ENST00000545001 UNC13AQ9UPW8 1703 aa18.42■□□□□ 0.54
AC135279.2-201ENST00000545001 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
AC135279.2-201ENST00000545001 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
AC135279.2-201ENST00000545001 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
AC135279.2-201ENST00000545001 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
AC135279.2-201ENST00000545001 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
AC135279.2-201ENST00000545001 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
AC135279.2-201ENST00000545001 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
AC135279.2-201ENST00000545001 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
AC135279.2-201ENST00000545001 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
AC135279.2-201ENST00000545001 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
AC135279.2-201ENST00000545001 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
AC135279.2-201ENST00000545001 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
AC135279.2-201ENST00000545001 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.41
AC135279.2-201ENST00000545001 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
AC135279.2-201ENST00000545001 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
AC135279.2-201ENST00000545001 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
AC135279.2-201ENST00000545001 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
AC135279.2-201ENST00000545001 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
AC135279.2-201ENST00000545001 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
AC135279.2-201ENST00000545001 HMGXB3Q12766 1538 aa17.45■□□□□ 0.38
AC135279.2-201ENST00000545001 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
AC135279.2-201ENST00000545001 WIZO95785 1651 aa17.39■□□□□ 0.37
AC135279.2-201ENST00000545001 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
AC135279.2-201ENST00000545001 TOP2AP11388 1531 aaKnown RBP17.28■□□□□ 0.36
AC135279.2-201ENST00000545001 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
AC135279.2-201ENST00000545001 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
AC135279.2-201ENST00000545001 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
AC135279.2-201ENST00000545001 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
AC135279.2-201ENST00000545001 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
AC135279.2-201ENST00000545001 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
AC135279.2-201ENST00000545001 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
AC135279.2-201ENST00000545001 RNF216Q9NWF9 866 aaPredicted RBP17■□□□□ 0.31
AC135279.2-201ENST00000545001 CADPSQ9ULU8 1353 aa17■□□□□ 0.31
AC135279.2-201ENST00000545001 CFTRP13569 1480 aa16.96■□□□□ 0.31
AC135279.2-201ENST00000545001 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
AC135279.2-201ENST00000545001 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
AC135279.2-201ENST00000545001 RNF39Q9H2S5 420 aa16.84■□□□□ 0.29
AC135279.2-201ENST00000545001 NESP48681 1621 aa16.84■□□□□ 0.29
AC135279.2-201ENST00000545001 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
AC135279.2-201ENST00000545001 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
AC135279.2-201ENST00000545001 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
AC135279.2-201ENST00000545001 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
AC135279.2-201ENST00000545001 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
AC135279.2-201ENST00000545001 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
AC135279.2-201ENST00000545001 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
AC135279.2-201ENST00000545001 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
AC135279.2-201ENST00000545001 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
AC135279.2-201ENST00000545001 WDR62O43379 1518 aa16.58■□□□□ 0.24
AC135279.2-201ENST00000545001 KCNA4P22459 653 aa16.57■□□□□ 0.24
AC135279.2-201ENST00000545001 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
AC135279.2-201ENST00000545001 CUX2O14529 1486 aa16.54■□□□□ 0.24
AC135279.2-201ENST00000545001 URB2Q14146 1524 aaKnown RBP16.53■□□□□ 0.24
AC135279.2-201ENST00000545001 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
AC135279.2-201ENST00000545001 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
AC135279.2-201ENST00000545001 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
AC135279.2-201ENST00000545001 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
AC135279.2-201ENST00000545001 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
AC135279.2-201ENST00000545001 CUX1P39880 1505 aa16.46■□□□□ 0.23
AC135279.2-201ENST00000545001 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
AC135279.2-201ENST00000545001 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
AC135279.2-201ENST00000545001 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
AC135279.2-201ENST00000545001 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
AC135279.2-201ENST00000545001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.21
AC135279.2-201ENST00000545001 SOGA1O94964 1423 aa16.36■□□□□ 0.21
AC135279.2-201ENST00000545001 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
AC135279.2-201ENST00000545001 TARBP1Q13395 1621 aaKnown RBP16.34■□□□□ 0.21
AC135279.2-201ENST00000545001 TRIM41Q8WV44 630 aa16.31■□□□□ 0.2
AC135279.2-201ENST00000545001 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
AC135279.2-201ENST00000545001 RAD54L2Q9Y4B4 1467 aa16.25■□□□□ 0.19
AC135279.2-201ENST00000545001 ABCA5Q8WWZ7 1642 aa16.17■□□□□ 0.18
AC135279.2-201ENST00000545001 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
AC135279.2-201ENST00000545001 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
AC135279.2-201ENST00000545001 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
AC135279.2-201ENST00000545001 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
AC135279.2-201ENST00000545001 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
AC135279.2-201ENST00000545001 GRIN2BQ13224 1484 aa16.15■□□□□ 0.18
AC135279.2-201ENST00000545001 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
AC135279.2-201ENST00000545001 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.17
AC135279.2-201ENST00000545001 EEA1Q15075 1411 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms