RNA–Protein interactions for RNA: ENST00000544979.6

ZHX3-211, Transcript of zinc fingers and homeoboxes 3, humanhuman

TSL 1 (best) BASIC

Gene ZHX3, Length 3,933 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZHX3-211ENST00000544979 NISCHQ9Y2I1 1504 aa13.91□□□□□ -0.18
ZHX3-211ENST00000544979 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
ZHX3-211ENST00000544979 HRCP23327 699 aa13.33□□□□□ -0.28
ZHX3-211ENST00000544979 MYT1Q01538 1121 aa13.31□□□□□ -0.28
ZHX3-211ENST00000544979 PCGF6Q9BYE7 350 aa13.05□□□□□ -0.32
ZHX3-211ENST00000544979 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
ZHX3-211ENST00000544979 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
ZHX3-211ENST00000544979 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
ZHX3-211ENST00000544979 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.37
ZHX3-211ENST00000544979 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
ZHX3-211ENST00000544979 CENPBP07199 599 aaPredicted RBP12.62□□□□□ -0.39
ZHX3-211ENST00000544979 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
ZHX3-211ENST00000544979 CHIC1Q5VXU3 224 aa12.56□□□□□ -0.4
ZHX3-211ENST00000544979 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
ZHX3-211ENST00000544979 TTBK1Q5TCY1 1321 aaPredicted RBP12.47□□□□□ -0.41
ZHX3-211ENST00000544979 ACIN1Q9UKV3 1341 aaKnown RBP12.43□□□□□ -0.42
ZHX3-211ENST00000544979 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
ZHX3-211ENST00000544979 MYO15BQ96JP2 1530 aa12.35□□□□□ -0.43
ZHX3-211ENST00000544979 CCDC180Q9P1Z9 1646 aa12.29□□□□□ -0.44
ZHX3-211ENST00000544979 LOC105371045A0A1W2PR82 267 aa12.27□□□□□ -0.44
ZHX3-211ENST00000544979 NEUROD1Q13562 356 aa12.25□□□□□ -0.45
ZHX3-211ENST00000544979 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
ZHX3-211ENST00000544979 DIEXFQ68CQ4 756 aaKnown RBP12.19□□□□□ -0.46
ZHX3-211ENST00000544979 DCAF8L2P0C7V8 631 aa12.12□□□□□ -0.47
ZHX3-211ENST00000544979 YTHDC1Q96MU7 727 aaKnown RBP12.07□□□□□ -0.48
ZHX3-211ENST00000544979 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
ZHX3-211ENST00000544979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.97□□□□□ -0.49
ZHX3-211ENST00000544979 FAM9AQ8IZU1 332 aaPredicted RBP11.96□□□□□ -0.5
ZHX3-211ENST00000544979 BCL11AQ9H165 835 aa11.95□□□□□ -0.5
ZHX3-211ENST00000544979 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
ZHX3-211ENST00000544979 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
ZHX3-211ENST00000544979 ANP32EQ9BTT0 268 aa11.9□□□□□ -0.5
ZHX3-211ENST00000544979 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
ZHX3-211ENST00000544979 ZCCHC6Q5VYS8 1495 aaKnown RBP11.82□□□□□ -0.52
ZHX3-211ENST00000544979 ERICH6Q7L0X2 663 aa11.8□□□□□ -0.52
ZHX3-211ENST00000544979 NEFLP07196 543 aa11.71□□□□□ -0.54
ZHX3-211ENST00000544979 MIER1Q8N108 512 aa11.69□□□□□ -0.54
ZHX3-211ENST00000544979 SUPT16HQ9Y5B9 1047 aaKnown RBP11.63□□□□□ -0.55
ZHX3-211ENST00000544979 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
ZHX3-211ENST00000544979 MYT1LQ9UL68 1186 aa11.61□□□□□ -0.55
ZHX3-211ENST00000544979 TSHZ2Q9NRE2 1034 aa11.59□□□□□ -0.55
ZHX3-211ENST00000544979 APLP2Q06481 763 aa11.55□□□□□ -0.56
ZHX3-211ENST00000544979 BCANQ96GW7 911 aa11.52□□□□□ -0.57
ZHX3-211ENST00000544979 PRKCSHP14314 528 aaPredicted RBP11.51□□□□□ -0.57
ZHX3-211ENST00000544979 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
ZHX3-211ENST00000544979 FKBP8Q14318 412 aa11.45□□□□□ -0.58
ZHX3-211ENST00000544979 UBTFP17480 764 aaKnown RBP11.44□□□□□ -0.58
ZHX3-211ENST00000544979 CDK11AQ9UQ88 783 aaPredicted RBP11.41□□□□□ -0.58
ZHX3-211ENST00000544979 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
ZHX3-211ENST00000544979 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
ZHX3-211ENST00000544979 WRNQ14191 1432 aaPredicted RBP eCLIP11.3□□□□□ -0.6
ZHX3-211ENST00000544979 RSF1Q96T23 1441 aaPredicted RBP11.29□□□□□ -0.6
ZHX3-211ENST00000544979 CEP162Q5TB80 1403 aa11.28□□□□□ -0.6
ZHX3-211ENST00000544979 DEKP35659 375 aaKnown RBP11.27□□□□□ -0.6
ZHX3-211ENST00000544979 ERICH6BQ5W0A0 696 aa11.26□□□□□ -0.61
ZHX3-211ENST00000544979 RB1CC1Q8TDY2 1594 aa11.25□□□□□ -0.61
ZHX3-211ENST00000544979 ABCC9O60706 1549 aa11.25□□□□□ -0.61
ZHX3-211ENST00000544979 ITGAEP38570 1179 aa11.24□□□□□ -0.61
ZHX3-211ENST00000544979 FANCIQ9NVI1 1328 aa11.24□□□□□ -0.61
ZHX3-211ENST00000544979 ANP32CO43423 234 aa11.22□□□□□ -0.61
ZHX3-211ENST00000544979 TNIKQ9UKE5 1360 aa11.21□□□□□ -0.61
ZHX3-211ENST00000544979 NBR1Q14596 966 aa11.16□□□□□ -0.62
ZHX3-211ENST00000544979 ANP32AP39687 249 aaKnown RBP11.16□□□□□ -0.62
ZHX3-211ENST00000544979 EEA1Q15075 1411 aa11.14□□□□□ -0.63
ZHX3-211ENST00000544979 TRIM52Q96A61 297 aa11.14□□□□□ -0.63
ZHX3-211ENST00000544979 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
ZHX3-211ENST00000544979 NOP58Q9Y2X3 529 aaKnown RBP11.12□□□□□ -0.63
ZHX3-211ENST00000544979 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
ZHX3-211ENST00000544979 RANGAP1P46060 587 aaPredicted RBP11.09□□□□□ -0.63
ZHX3-211ENST00000544979 EIF5BO60841 1220 aaKnown RBP11.09□□□□□ -0.63
ZHX3-211ENST00000544979 MSH5O43196 834 aa11.08□□□□□ -0.64
ZHX3-211ENST00000544979 CCER2I3L3R5 266 aa11.08□□□□□ -0.64
ZHX3-211ENST00000544979 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
ZHX3-211ENST00000544979 ZBTB47Q9UFB7 747 aaPredicted RBP11.07□□□□□ -0.64
ZHX3-211ENST00000544979 PPP4R2Q9NY27 417 aa11.05□□□□□ -0.64
ZHX3-211ENST00000544979 HNRNPUQ00839 825 aaKnown RBP eCLIP11.05□□□□□ -0.64
ZHX3-211ENST00000544979 GLIPR1L2Q4G1C9 344 aa11.04□□□□□ -0.64
ZHX3-211ENST00000544979 CLIP1P30622 1438 aa11.03□□□□□ -0.64
ZHX3-211ENST00000544979 KCNH8Q96L42 1107 aa11.02□□□□□ -0.65
ZHX3-211ENST00000544979 DHX57Q6P158 1386 aaKnown RBP11.01□□□□□ -0.65
ZHX3-211ENST00000544979 IRX6P78412 446 aaPredicted RBP11.01□□□□□ -0.65
ZHX3-211ENST00000544979 SCRIBQ14160 1630 aa11□□□□□ -0.65
ZHX3-211ENST00000544979 RTN4Q9NQC3 1192 aaKnown RBP11□□□□□ -0.65
ZHX3-211ENST00000544979 SALL2Q9Y467 1007 aaPredicted RBP10.99□□□□□ -0.65
ZHX3-211ENST00000544979 DAXXQ9UER7 740 aaPredicted RBP10.98□□□□□ -0.65
ZHX3-211ENST00000544979 CCDC136Q96JN2 1154 aa10.98□□□□□ -0.65
ZHX3-211ENST00000544979 VPS8Q8N3P4 1428 aa10.97□□□□□ -0.65
ZHX3-211ENST00000544979 UBE2Q2Q8WVN8 375 aa10.96□□□□□ -0.65
ZHX3-211ENST00000544979 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
ZHX3-211ENST00000544979 CEP164Q9UPV0 1460 aa10.94□□□□□ -0.66
ZHX3-211ENST00000544979 SOGA1O94964 1423 aa10.93□□□□□ -0.66
ZHX3-211ENST00000544979 PPM1GO15355 546 aaPredicted RBP10.92□□□□□ -0.66
ZHX3-211ENST00000544979 IPO9Q96P70 1041 aaKnown RBP10.92□□□□□ -0.66
ZHX3-211ENST00000544979 TIMELESSQ9UNS1 1208 aa10.91□□□□□ -0.66
ZHX3-211ENST00000544979 CCDC88BA6NC98 1476 aa10.91□□□□□ -0.66
ZHX3-211ENST00000544979 USP35Q9P2H5 1018 aa10.91□□□□□ -0.66
ZHX3-211ENST00000544979 NEFMP07197 916 aa10.9□□□□□ -0.66
ZHX3-211ENST00000544979 B4GALNT3Q6L9W6 998 aa10.89□□□□□ -0.67
ZHX3-211ENST00000544979 NPM2Q86SE8 214 aaKnown RBP10.87□□□□□ -0.67
ZHX3-211ENST00000544979 IL27Q8NEV9 243 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms