RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
RIMKLB-212ENST00000544257 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
RIMKLB-212ENST00000544257 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
RIMKLB-212ENST00000544257 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
RIMKLB-212ENST00000544257 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
RIMKLB-212ENST00000544257 FOXD1Q16676 465 aa21.92■■□□□ 1.1
RIMKLB-212ENST00000544257 PLPPR3Q6T4P5 718 aa21.43■■□□□ 1.02
RIMKLB-212ENST00000544257 POTEDQ86YR6 584 aa21.27■□□□□ 0.99
RIMKLB-212ENST00000544257 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
RIMKLB-212ENST00000544257 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
RIMKLB-212ENST00000544257 ADRA2BP18089 450 aa20.72■□□□□ 0.91
RIMKLB-212ENST00000544257 PIAS4Q8N2W9 510 aaPredicted RBP20.59■□□□□ 0.89
RIMKLB-212ENST00000544257 MSH5O43196 834 aa20.42■□□□□ 0.86
RIMKLB-212ENST00000544257 ABCC9O60706 1549 aa20.21■□□□□ 0.83
RIMKLB-212ENST00000544257 NACADO15069 1562 aa19.56■□□□□ 0.72
RIMKLB-212ENST00000544257 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
RIMKLB-212ENST00000544257 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
RIMKLB-212ENST00000544257 MYO15BQ96JP2 1530 aa19.52■□□□□ 0.72
RIMKLB-212ENST00000544257 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
RIMKLB-212ENST00000544257 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
RIMKLB-212ENST00000544257 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.64
RIMKLB-212ENST00000544257 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
RIMKLB-212ENST00000544257 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
RIMKLB-212ENST00000544257 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
RIMKLB-212ENST00000544257 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
RIMKLB-212ENST00000544257 PABPN1Q86U42 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
RIMKLB-212ENST00000544257 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
RIMKLB-212ENST00000544257 PPP4R3CPQ6ZMV5 832 aa18.81■□□□□ 0.6
RIMKLB-212ENST00000544257 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
RIMKLB-212ENST00000544257 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
RIMKLB-212ENST00000544257 EIF4G1Q04637 1599 aaKnown RBP18.43■□□□□ 0.54
RIMKLB-212ENST00000544257 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
RIMKLB-212ENST00000544257 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
RIMKLB-212ENST00000544257 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
RIMKLB-212ENST00000544257 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
RIMKLB-212ENST00000544257 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
RIMKLB-212ENST00000544257 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
RIMKLB-212ENST00000544257 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
RIMKLB-212ENST00000544257 RNF216Q9NWF9 866 aaPredicted RBP18.13■□□□□ 0.49
RIMKLB-212ENST00000544257 SMARCA2P51531 1590 aa18.05■□□□□ 0.48
RIMKLB-212ENST00000544257 NCAPD3P42695 1498 aa18.04■□□□□ 0.48
RIMKLB-212ENST00000544257 ATAD2BQ9ULI0 1458 aa18.04■□□□□ 0.48
RIMKLB-212ENST00000544257 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
RIMKLB-212ENST00000544257 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
RIMKLB-212ENST00000544257 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
RIMKLB-212ENST00000544257 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
RIMKLB-212ENST00000544257 NPM3O75607 178 aaKnown RBP17.92■□□□□ 0.46
RIMKLB-212ENST00000544257 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
RIMKLB-212ENST00000544257 KCNA4P22459 653 aa17.87■□□□□ 0.45
RIMKLB-212ENST00000544257 RSF1Q96T23 1441 aaPredicted RBP17.86■□□□□ 0.45
RIMKLB-212ENST00000544257 WIZO95785 1651 aa17.83■□□□□ 0.44
RIMKLB-212ENST00000544257 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
RIMKLB-212ENST00000544257 LAMC3Q9Y6N6 1575 aa17.56■□□□□ 0.4
RIMKLB-212ENST00000544257 NESP48681 1621 aa17.51■□□□□ 0.39
RIMKLB-212ENST00000544257 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
RIMKLB-212ENST00000544257 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
RIMKLB-212ENST00000544257 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
RIMKLB-212ENST00000544257 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
RIMKLB-212ENST00000544257 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
RIMKLB-212ENST00000544257 CFTRP13569 1480 aa17.42■□□□□ 0.38
RIMKLB-212ENST00000544257 SUPT5HO00267 1087 aaKnown RBP17.36■□□□□ 0.37
RIMKLB-212ENST00000544257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.376e-6■□□□□ 9.5
RIMKLB-212ENST00000544257 CACNB1Q02641 598 aaPredicted RBP17.34■□□□□ 0.37
RIMKLB-212ENST00000544257 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.37
RIMKLB-212ENST00000544257 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
RIMKLB-212ENST00000544257 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
RIMKLB-212ENST00000544257 CUX2O14529 1486 aa17.28■□□□□ 0.36
RIMKLB-212ENST00000544257 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
RIMKLB-212ENST00000544257 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.36
RIMKLB-212ENST00000544257 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
RIMKLB-212ENST00000544257 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
RIMKLB-212ENST00000544257 WDR62O43379 1518 aa17.19■□□□□ 0.34
RIMKLB-212ENST00000544257 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
RIMKLB-212ENST00000544257 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
RIMKLB-212ENST00000544257 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
RIMKLB-212ENST00000544257 TOPBP1Q92547 1522 aa17.02■□□□□ 0.32
RIMKLB-212ENST00000544257 SLC4A2P04920 1241 aa17.02■□□□□ 0.31
RIMKLB-212ENST00000544257 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
RIMKLB-212ENST00000544257 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
RIMKLB-212ENST00000544257 CUX1P39880 1505 aa16.91■□□□□ 0.3
RIMKLB-212ENST00000544257 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
RIMKLB-212ENST00000544257 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
RIMKLB-212ENST00000544257 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
RIMKLB-212ENST00000544257 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
RIMKLB-212ENST00000544257 WRNQ14191 1432 aaPredicted RBP eCLIP16.84■□□□□ 0.29
RIMKLB-212ENST00000544257 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
RIMKLB-212ENST00000544257 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
RIMKLB-212ENST00000544257 SOGA1O94964 1423 aa16.8■□□□□ 0.28
RIMKLB-212ENST00000544257 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
RIMKLB-212ENST00000544257 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
RIMKLB-212ENST00000544257 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
RIMKLB-212ENST00000544257 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.27
RIMKLB-212ENST00000544257 EIF4G3O43432 1585 aaKnown RBP16.75■□□□□ 0.27
RIMKLB-212ENST00000544257 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
RIMKLB-212ENST00000544257 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
RIMKLB-212ENST00000544257 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
RIMKLB-212ENST00000544257 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
RIMKLB-212ENST00000544257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
RIMKLB-212ENST00000544257 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
RIMKLB-212ENST00000544257 CAPN15O75808 1086 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms