RNA–Protein interactions for RNA: ENST00000543491.2

PCDH7-206, Transcript of protocadherin 7, humanhuman

APPRIS ALT2 BASIC

Gene PCDH7, Length 4,457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-206ENST00000543491 NISCHQ9Y2I1 1504 aa31.57■■■□□ 2.64
PCDH7-206ENST00000543491 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
PCDH7-206ENST00000543491 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
PCDH7-206ENST00000543491 SUPT5HO00267 1087 aaKnown RBP29.22■■■□□ 2.27
PCDH7-206ENST00000543491 EHMT2Q96KQ7 1210 aa27.83■■■□□ 2.05
PCDH7-206ENST00000543491 PCGF6Q9BYE7 350 aa27.78■■■□□ 2.04
PCDH7-206ENST00000543491 PELP1Q8IZL8 1130 aaKnown RBP27.7■■■□□ 2.03
PCDH7-206ENST00000543491 FAM9AQ8IZU1 332 aaPredicted RBP27.4■■□□□ 1.98
PCDH7-206ENST00000543491 HRCP23327 699 aa27.36■■□□□ 1.97
PCDH7-206ENST00000543491 ZEB1P37275 1124 aaPredicted RBP27.33■■□□□ 1.97
PCDH7-206ENST00000543491 MYT1Q01538 1121 aa27.12■■□□□ 1.93
PCDH7-206ENST00000543491 CENPBP07199 599 aaPredicted RBP27.03■■□□□ 1.92
PCDH7-206ENST00000543491 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
PCDH7-206ENST00000543491 TTBK1Q5TCY1 1321 aaPredicted RBP26.79■■□□□ 1.88
PCDH7-206ENST00000543491 TRIM26Q12899 539 aaPredicted RBP26.77■■□□□ 1.88
PCDH7-206ENST00000543491 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
PCDH7-206ENST00000543491 ABCC9O60706 1549 aa26.67■■□□□ 1.86
PCDH7-206ENST00000543491 CCER1Q8TC90 406 aaPredicted RBP26.63■■□□□ 1.85
PCDH7-206ENST00000543491 PPARGC1BQ86YN6 1023 aaKnown RBP26.57■■□□□ 1.84
PCDH7-206ENST00000543491 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
PCDH7-206ENST00000543491 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
PCDH7-206ENST00000543491 APLP2Q06481 763 aa26.42■■□□□ 1.82
PCDH7-206ENST00000543491 UBTFP17480 764 aaKnown RBP26.31■■□□□ 1.8
PCDH7-206ENST00000543491 ZCCHC6Q5VYS8 1495 aaKnown RBP26.28■■□□□ 1.8
PCDH7-206ENST00000543491 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
PCDH7-206ENST00000543491 YTHDC1Q96MU7 727 aaKnown RBP26.12■■□□□ 1.77
PCDH7-206ENST00000543491 CCDC180Q9P1Z9 1646 aa25.98■■□□□ 1.75
PCDH7-206ENST00000543491 ERICH6Q7L0X2 663 aa25.92■■□□□ 1.74
PCDH7-206ENST00000543491 ATP1B4Q9UN42 357 aaPredicted RBP25.89■■□□□ 1.74
PCDH7-206ENST00000543491 DIEXFQ68CQ4 756 aaKnown RBP25.81■■□□□ 1.72
PCDH7-206ENST00000543491 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
PCDH7-206ENST00000543491 NEFLP07196 543 aa25.77■■□□□ 1.72
PCDH7-206ENST00000543491 GTF3C3Q9Y5Q9 886 aa25.68■■□□□ 1.7
PCDH7-206ENST00000543491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.66■■□□□ 1.7
PCDH7-206ENST00000543491 ACIN1Q9UKV3 1341 aaKnown RBP25.6■■□□□ 1.69
PCDH7-206ENST00000543491 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.69
PCDH7-206ENST00000543491 HNRNPUL2Q1KMD3 747 aaKnown RBP25.44■■□□□ 1.66
PCDH7-206ENST00000543491 ITGAEP38570 1179 aa25.4■■□□□ 1.66
PCDH7-206ENST00000543491 SCAF1Q9H7N4 1312 aaKnown RBP25.3■■□□□ 1.64
PCDH7-206ENST00000543491 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
PCDH7-206ENST00000543491 RSF1Q96T23 1441 aaPredicted RBP25.26■■□□□ 1.63
PCDH7-206ENST00000543491 ZNF316A6NFI3 1004 aaPredicted RBP25.23■■□□□ 1.63
PCDH7-206ENST00000543491 CSRNP3Q8WYN3 585 aa25.16■■□□□ 1.62
PCDH7-206ENST00000543491 NEUROD1Q13562 356 aa25.1■■□□□ 1.61
PCDH7-206ENST00000543491 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
PCDH7-206ENST00000543491 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
PCDH7-206ENST00000543491 NACADO15069 1562 aa24.96■■□□□ 1.59
PCDH7-206ENST00000543491 CLSPNQ9HAW4 1339 aa24.95■■□□□ 1.58
PCDH7-206ENST00000543491 P3H3Q8IVL6 736 aa24.82■■□□□ 1.56
PCDH7-206ENST00000543491 FAM50AQ14320 339 aaKnown RBP24.8■■□□□ 1.56
PCDH7-206ENST00000543491 BCANQ96GW7 911 aa24.76■■□□□ 1.55
PCDH7-206ENST00000543491 RTL5Q5HYW3 569 aaPredicted RBP24.66■■□□□ 1.54
PCDH7-206ENST00000543491 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
PCDH7-206ENST00000543491 CDK11AQ9UQ88 783 aaPredicted RBP24.59■■□□□ 1.53
PCDH7-206ENST00000543491 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
PCDH7-206ENST00000543491 DAXXQ9UER7 740 aaPredicted RBP24.56■■□□□ 1.52
PCDH7-206ENST00000543491 FBLN2P98095 1184 aa24.55■■□□□ 1.52
PCDH7-206ENST00000543491 ANP32CO43423 234 aa24.54■■□□□ 1.52
PCDH7-206ENST00000543491 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
PCDH7-206ENST00000543491 MIER1Q8N108 512 aa24.49■■□□□ 1.51
PCDH7-206ENST00000543491 CNGB1Q14028 1251 aaPredicted RBP24.47■■□□□ 1.51
PCDH7-206ENST00000543491 POLR3GLQ9BT43 218 aa24.46■■□□□ 1.51
PCDH7-206ENST00000543491 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
PCDH7-206ENST00000543491 BAZ1BQ9UIG0 1483 aaKnown RBP24.43■■□□□ 1.5
PCDH7-206ENST00000543491 MYT1LQ9UL68 1186 aa24.39■■□□□ 1.5
PCDH7-206ENST00000543491 TRIM52Q96A61 297 aa24.38■■□□□ 1.49
PCDH7-206ENST00000543491 FKBP8Q14318 412 aa24.38■■□□□ 1.49
PCDH7-206ENST00000543491 CEP162Q5TB80 1403 aa24.35■■□□□ 1.49
PCDH7-206ENST00000543491 CLIP1P30622 1438 aa24.32■■□□□ 1.48
PCDH7-206ENST00000543491 SOGA1O94964 1423 aa24.31■■□□□ 1.48
PCDH7-206ENST00000543491 CCDC88BA6NC98 1476 aa24.29■■□□□ 1.48
PCDH7-206ENST00000543491 WIZO95785 1651 aa24.29■■□□□ 1.48
PCDH7-206ENST00000543491 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
PCDH7-206ENST00000543491 ANP32EQ9BTT0 268 aa24.24■■□□□ 1.47
PCDH7-206ENST00000543491 GOLGA3Q08378 1498 aa24.2■■□□□ 1.46
PCDH7-206ENST00000543491 EEA1Q15075 1411 aa24.2■■□□□ 1.46
PCDH7-206ENST00000543491 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
PCDH7-206ENST00000543491 ANP32AP39687 249 aaKnown RBP24.1■■□□□ 1.45
PCDH7-206ENST00000543491 DDX10Q13206 875 aaKnown RBP24.09■■□□□ 1.45
PCDH7-206ENST00000543491 ZNF326Q5BKZ1 582 aaKnown RBP24.08■■□□□ 1.44
PCDH7-206ENST00000543491 ZNF777Q9ULD5 760 aaPredicted RBP24.07■■□□□ 1.44
PCDH7-206ENST00000543491 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
PCDH7-206ENST00000543491 KIF27Q86VH2 1401 aa24■■□□□ 1.43
PCDH7-206ENST00000543491 CHIC2Q9UKJ5 165 aa23.99■■□□□ 1.43
PCDH7-206ENST00000543491 HNRNPUQ00839 825 aaKnown RBP eCLIP23.98■■□□□ 1.43
PCDH7-206ENST00000543491 SUPT16HQ9Y5B9 1047 aaKnown RBP23.98■■□□□ 1.43
PCDH7-206ENST00000543491 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.43
PCDH7-206ENST00000543491 TONSLQ96HA7 1378 aa23.88■■□□□ 1.41
PCDH7-206ENST00000543491 SMARCA4P51532 1647 aa23.87■■□□□ 1.41
PCDH7-206ENST00000543491 MTUS2Q5JR59 1369 aa23.86■■□□□ 1.41
PCDH7-206ENST00000543491 ATAD2BQ9ULI0 1458 aa23.84■■□□□ 1.41
PCDH7-206ENST00000543491 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
PCDH7-206ENST00000543491 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
PCDH7-206ENST00000543491 CUX2O14529 1486 aa23.81■■□□□ 1.4
PCDH7-206ENST00000543491 BCL11AQ9H165 835 aa23.8■■□□□ 1.4
PCDH7-206ENST00000543491 CHMP7Q8WUX9 453 aaPredicted RBP23.8■■□□□ 1.4
PCDH7-206ENST00000543491 HIRIP3Q9BW71 556 aaPredicted RBP23.79■■□□□ 1.4
PCDH7-206ENST00000543491 CARMIL1Q5VZK9 1371 aa23.74■■□□□ 1.39
PCDH7-206ENST00000543491 ZBTB47Q9UFB7 747 aaPredicted RBP23.74■■□□□ 1.39
PCDH7-206ENST00000543491 NBR1Q14596 966 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms