RNA–Protein interactions for RNA: ENST00000542701.1

RNF10-217, Transcript of ring finger protein 10, humanhuman

TSL 5

Gene RNF10, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF10-217ENST00000542701 AEBP2Q6ZN18 517 aaPredicted RBP25.56■■□□□ 1.68
RNF10-217ENST00000542701 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
RNF10-217ENST00000542701 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
RNF10-217ENST00000542701 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
RNF10-217ENST00000542701 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
RNF10-217ENST00000542701 FOXD1Q16676 465 aa20.27■□□□□ 0.84
RNF10-217ENST00000542701 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
RNF10-217ENST00000542701 ADRA2BP18089 450 aa19.21■□□□□ 0.67
RNF10-217ENST00000542701 PPP6R1Q9UPN7 881 aa19.19■□□□□ 0.66
RNF10-217ENST00000542701 PIAS4Q8N2W9 510 aaPredicted RBP19.14■□□□□ 0.65
RNF10-217ENST00000542701 MSH5O43196 834 aa19.01■□□□□ 0.63
RNF10-217ENST00000542701 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
RNF10-217ENST00000542701 CCDC180Q9P1Z9 1646 aa17.89■□□□□ 0.45
RNF10-217ENST00000542701 SCAF1Q9H7N4 1312 aaKnown RBP17.86■□□□□ 0.45
RNF10-217ENST00000542701 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
RNF10-217ENST00000542701 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
RNF10-217ENST00000542701 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
RNF10-217ENST00000542701 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.35
RNF10-217ENST00000542701 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
RNF10-217ENST00000542701 ZCCHC6Q5VYS8 1495 aaKnown RBP17.1■□□□□ 0.33
RNF10-217ENST00000542701 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
RNF10-217ENST00000542701 ABCC9O60706 1549 aa16.98■□□□□ 0.31
RNF10-217ENST00000542701 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
RNF10-217ENST00000542701 DCAF1Q9Y4B6 1507 aa16.88■□□□□ 0.29
RNF10-217ENST00000542701 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
RNF10-217ENST00000542701 KCNA4P22459 653 aa16.79■□□□□ 0.28
RNF10-217ENST00000542701 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
RNF10-217ENST00000542701 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
RNF10-217ENST00000542701 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
RNF10-217ENST00000542701 NACADO15069 1562 aa16.68■□□□□ 0.26
RNF10-217ENST00000542701 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
RNF10-217ENST00000542701 SHROOM4Q9ULL8 1493 aa16.46■□□□□ 0.22
RNF10-217ENST00000542701 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
RNF10-217ENST00000542701 SCRIBQ14160 1630 aa16.38■□□□□ 0.21
RNF10-217ENST00000542701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
RNF10-217ENST00000542701 UNC13AQ9UPW8 1703 aa16.2■□□□□ 0.18
RNF10-217ENST00000542701 RNF39Q9H2S5 420 aa16.13■□□□□ 0.17
RNF10-217ENST00000542701 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
RNF10-217ENST00000542701 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
RNF10-217ENST00000542701 BICRAQ9NZM4 1560 aa16.03■□□□□ 0.16
RNF10-217ENST00000542701 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
RNF10-217ENST00000542701 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
RNF10-217ENST00000542701 SLC4A2P04920 1241 aa15.86■□□□□ 0.13
RNF10-217ENST00000542701 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
RNF10-217ENST00000542701 CECR2Q9BXF3 1484 aa15.8■□□□□ 0.12
RNF10-217ENST00000542701 BAZ1AQ9NRL2 1556 aaPredicted RBP15.77■□□□□ 0.12
RNF10-217ENST00000542701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
RNF10-217ENST00000542701 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
RNF10-217ENST00000542701 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
RNF10-217ENST00000542701 APLP2Q06481 763 aa15.73■□□□□ 0.11
RNF10-217ENST00000542701 RSF1Q96T23 1441 aaPredicted RBP15.72■□□□□ 0.11
RNF10-217ENST00000542701 MROH2BQ7Z745 1585 aa15.71■□□□□ 0.11
RNF10-217ENST00000542701 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
RNF10-217ENST00000542701 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
RNF10-217ENST00000542701 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
RNF10-217ENST00000542701 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
RNF10-217ENST00000542701 WIZO95785 1651 aa15.58■□□□□ 0.08
RNF10-217ENST00000542701 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.08
RNF10-217ENST00000542701 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.08
RNF10-217ENST00000542701 CAPN15O75808 1086 aa15.5■□□□□ 0.07
RNF10-217ENST00000542701 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
RNF10-217ENST00000542701 ATAD2BQ9ULI0 1458 aa15.47■□□□□ 0.07
RNF10-217ENST00000542701 TOP2AP11388 1531 aaKnown RBP15.46■□□□□ 0.07
RNF10-217ENST00000542701 ZNF219Q9P2Y4 722 aaPredicted RBP15.42■□□□□ 0.06
RNF10-217ENST00000542701 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
RNF10-217ENST00000542701 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
RNF10-217ENST00000542701 CC2D2AQ9P2K1 1620 aa15.38■□□□□ 0.05
RNF10-217ENST00000542701 HMGXB3Q12766 1538 aa15.37■□□□□ 0.05
RNF10-217ENST00000542701 NCAPD3P42695 1498 aa15.37■□□□□ 0.05
RNF10-217ENST00000542701 ZBTB22O15209 634 aa15.36■□□□□ 0.05
RNF10-217ENST00000542701 TRHP20396 242 aaPredicted RBP15.32■□□□□ 0.04
RNF10-217ENST00000542701 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
RNF10-217ENST00000542701 DSG3P32926 999 aa15.24■□□□□ 0.03
RNF10-217ENST00000542701 ATXN8OSP0DMR3 200 aa15.22■□□□□ 0.03
RNF10-217ENST00000542701 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
RNF10-217ENST00000542701 CSRNP3Q8WYN3 585 aa15.11■□□□□ 0.01
RNF10-217ENST00000542701 ABCB7O75027 752 aa15.09■□□□□ 0.01
RNF10-217ENST00000542701 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
RNF10-217ENST00000542701 POLA2Q14181 598 aa15□□□□□ -0.01
RNF10-217ENST00000542701 CFTRP13569 1480 aa14.98□□□□□ -0.01
RNF10-217ENST00000542701 CADPSQ9ULU8 1353 aa14.95□□□□□ -0.02
RNF10-217ENST00000542701 PRDM2Q13029 1718 aa14.94□□□□□ -0.02
RNF10-217ENST00000542701 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
RNF10-217ENST00000542701 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
RNF10-217ENST00000542701 ABCC8Q09428 1581 aa14.88□□□□□ -0.03
RNF10-217ENST00000542701 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
RNF10-217ENST00000542701 NESP48681 1621 aa14.84□□□□□ -0.03
RNF10-217ENST00000542701 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
RNF10-217ENST00000542701 FANCD2Q9BXW9 1451 aa14.8□□□□□ -0.04
RNF10-217ENST00000542701 PDS5BQ9NTI5 1447 aa14.78□□□□□ -0.04
RNF10-217ENST00000542701 SYNJ1O43426 1573 aa14.77□□□□□ -0.05
RNF10-217ENST00000542701 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
RNF10-217ENST00000542701 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
RNF10-217ENST00000542701 TOP2BQ02880 1626 aa14.73□□□□□ -0.05
RNF10-217ENST00000542701 RBM42Q9BTD8 480 aaKnown RBP14.72□□□□□ -0.05
RNF10-217ENST00000542701 CUX1P39880 1505 aa14.71□□□□□ -0.05
RNF10-217ENST00000542701 DNAJC5Q9H3Z4 198 aa14.71□□□□□ -0.06
RNF10-217ENST00000542701 KIF21AQ7Z4S6 1674 aa14.7□□□□□ -0.06
RNF10-217ENST00000542701 FBLN2P98095 1184 aa14.69□□□□□ -0.06
RNF10-217ENST00000542701 DNMBPQ6XZF7 1577 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms