RNA–Protein interactions for RNA: ENST00000542485.1

ACVR1B-206, Transcript of activin A receptor type 1B, humanhuman

TSL 2 BASIC

Gene ACVR1B, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACVR1B-206ENST00000542485 NISCHQ9Y2I1 1504 aa32.63■■■□□ 2.81
ACVR1B-206ENST00000542485 CCDC180Q9P1Z9 1646 aa28.12■■■□□ 2.09
ACVR1B-206ENST00000542485 ZCCHC6Q5VYS8 1495 aaKnown RBP27.51■■□□□ 1.99
ACVR1B-206ENST00000542485 SHROOM4Q9ULL8 1493 aa27.23■■□□□ 1.95
ACVR1B-206ENST00000542485 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
ACVR1B-206ENST00000542485 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
ACVR1B-206ENST00000542485 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
ACVR1B-206ENST00000542485 MYO15BQ96JP2 1530 aa26.32■■□□□ 1.8
ACVR1B-206ENST00000542485 ABCC9O60706 1549 aa26.28■■□□□ 1.8
ACVR1B-206ENST00000542485 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
ACVR1B-206ENST00000542485 NACADO15069 1562 aa26.08■■□□□ 1.76
ACVR1B-206ENST00000542485 RB1CC1Q8TDY2 1594 aa25.75■■□□□ 1.71
ACVR1B-206ENST00000542485 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
ACVR1B-206ENST00000542485 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
ACVR1B-206ENST00000542485 CECR2Q9BXF3 1484 aa25.39■■□□□ 1.65
ACVR1B-206ENST00000542485 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
ACVR1B-206ENST00000542485 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
ACVR1B-206ENST00000542485 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.61
ACVR1B-206ENST00000542485 WIZO95785 1651 aa25.14■■□□□ 1.61
ACVR1B-206ENST00000542485 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
ACVR1B-206ENST00000542485 SMARCA4P51532 1647 aa24.98■■□□□ 1.59
ACVR1B-206ENST00000542485 PABPN1Q86U42 306 aaKnown RBP eCLIP24.95■■□□□ 1.59
ACVR1B-206ENST00000542485 TOP2AP11388 1531 aaKnown RBP24.8■■□□□ 1.56
ACVR1B-206ENST00000542485 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
ACVR1B-206ENST00000542485 LOC105371045A0A1W2PR82 267 aa24.66■■□□□ 1.54
ACVR1B-206ENST00000542485 SMARCA2P51531 1590 aa24.62■■□□□ 1.53
ACVR1B-206ENST00000542485 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
ACVR1B-206ENST00000542485 CCDC88BA6NC98 1476 aa24.61■■□□□ 1.53
ACVR1B-206ENST00000542485 PEG3Q9GZU2 1588 aa24.58■■□□□ 1.52
ACVR1B-206ENST00000542485 FAM9AQ8IZU1 332 aaPredicted RBP24.43■■□□□ 1.5
ACVR1B-206ENST00000542485 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
ACVR1B-206ENST00000542485 BAZ1BQ9UIG0 1483 aaKnown RBP24.35■■□□□ 1.49
ACVR1B-206ENST00000542485 ABCC8Q09428 1581 aa24.34■■□□□ 1.49
ACVR1B-206ENST00000542485 EHMT2Q96KQ7 1210 aa24.16■■□□□ 1.46
ACVR1B-206ENST00000542485 PCGF6Q9BYE7 350 aa24.13■■□□□ 1.45
ACVR1B-206ENST00000542485 HMGXB3Q12766 1538 aa24.08■■□□□ 1.45
ACVR1B-206ENST00000542485 NCAPD3P42695 1498 aa24.07■■□□□ 1.44
ACVR1B-206ENST00000542485 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
ACVR1B-206ENST00000542485 SOGA1O94964 1423 aa23.98■■□□□ 1.43
ACVR1B-206ENST00000542485 SYNJ1O43426 1573 aa23.95■■□□□ 1.42
ACVR1B-206ENST00000542485 EEA1Q15075 1411 aa23.92■■□□□ 1.42
ACVR1B-206ENST00000542485 TRIM26Q12899 539 aaPredicted RBP23.88■■□□□ 1.41
ACVR1B-206ENST00000542485 RUSC2Q8N2Y8 1516 aa23.87■■□□□ 1.41
ACVR1B-206ENST00000542485 CSRNP3Q8WYN3 585 aa23.83■■□□□ 1.41
ACVR1B-206ENST00000542485 HRCP23327 699 aa23.81■■□□□ 1.4
ACVR1B-206ENST00000542485 TOP2BQ02880 1626 aa23.76■■□□□ 1.39
ACVR1B-206ENST00000542485 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
ACVR1B-206ENST00000542485 CFTRP13569 1480 aa23.73■■□□□ 1.39
ACVR1B-206ENST00000542485 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
ACVR1B-206ENST00000542485 TNIKQ9UKE5 1360 aa23.7■■□□□ 1.38
ACVR1B-206ENST00000542485 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
ACVR1B-206ENST00000542485 CEP162Q5TB80 1403 aa23.67■■□□□ 1.38
ACVR1B-206ENST00000542485 UBTFP17480 764 aaKnown RBP23.65■■□□□ 1.38
ACVR1B-206ENST00000542485 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
ACVR1B-206ENST00000542485 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
ACVR1B-206ENST00000542485 KIF21BO75037 1637 aa23.61■■□□□ 1.37
ACVR1B-206ENST00000542485 CUX1P39880 1505 aa23.59■■□□□ 1.37
ACVR1B-206ENST00000542485 CADPSQ9ULU8 1353 aa23.55■■□□□ 1.36
ACVR1B-206ENST00000542485 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
ACVR1B-206ENST00000542485 RAPGEF2Q9Y4G8 1499 aa23.46■■□□□ 1.35
ACVR1B-206ENST00000542485 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
ACVR1B-206ENST00000542485 CLIP1P30622 1438 aa23.35■■□□□ 1.33
ACVR1B-206ENST00000542485 ERICH3Q5RHP9 1530 aa23.34■■□□□ 1.33
ACVR1B-206ENST00000542485 PRXQ9BXM0 1461 aa23.34■■□□□ 1.33
ACVR1B-206ENST00000542485 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
ACVR1B-206ENST00000542485 TTBK1Q5TCY1 1321 aaPredicted RBP23.27■■□□□ 1.32
ACVR1B-206ENST00000542485 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
ACVR1B-206ENST00000542485 NESP48681 1621 aa23.26■■□□□ 1.31
ACVR1B-206ENST00000542485 CUX2O14529 1486 aa23.23■■□□□ 1.31
ACVR1B-206ENST00000542485 RANGAP1P46060 587 aaPredicted RBP23.22■■□□□ 1.31
ACVR1B-206ENST00000542485 VPS8Q8N3P4 1428 aa23.2■■□□□ 1.3
ACVR1B-206ENST00000542485 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
ACVR1B-206ENST00000542485 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
ACVR1B-206ENST00000542485 ZEB1P37275 1124 aaPredicted RBP23.16■■□□□ 1.3
ACVR1B-206ENST00000542485 IGF1RP08069 1367 aa23.12■■□□□ 1.29
ACVR1B-206ENST00000542485 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
ACVR1B-206ENST00000542485 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
ACVR1B-206ENST00000542485 POLA1P09884 1462 aaPredicted RBP23.06■■□□□ 1.28
ACVR1B-206ENST00000542485 APLP2Q06481 763 aa23.05■■□□□ 1.28
ACVR1B-206ENST00000542485 ARAP1Q96P48 1450 aa23.04■■□□□ 1.28
ACVR1B-206ENST00000542485 RAD54L2Q9Y4B4 1467 aa23.04■■□□□ 1.28
ACVR1B-206ENST00000542485 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
ACVR1B-206ENST00000542485 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
ACVR1B-206ENST00000542485 PDS5BQ9NTI5 1447 aa23.01■■□□□ 1.27
ACVR1B-206ENST00000542485 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
ACVR1B-206ENST00000542485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.97■■□□□ 1.27
ACVR1B-206ENST00000542485 KIF21AQ7Z4S6 1674 aa22.95■■□□□ 1.26
ACVR1B-206ENST00000542485 ARHGAP35Q9NRY4 1499 aa22.93■■□□□ 1.26
ACVR1B-206ENST00000542485 CCER1Q8TC90 406 aaPredicted RBP22.92■■□□□ 1.26
ACVR1B-206ENST00000542485 WDR97A6NE52 1622 aa22.89■■□□□ 1.25
ACVR1B-206ENST00000542485 CUL7Q14999 1698 aa22.85■■□□□ 1.25
ACVR1B-206ENST00000542485 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
ACVR1B-206ENST00000542485 TDRD9Q8NDG6 1382 aaKnown RBP22.77■■□□□ 1.24
ACVR1B-206ENST00000542485 KANK4Q5T7N3 995 aaPredicted RBP22.76■■□□□ 1.23
ACVR1B-206ENST00000542485 HNRNPUL2Q1KMD3 747 aaKnown RBP22.76■■□□□ 1.23
ACVR1B-206ENST00000542485 GAPVD1Q14C86 1478 aa22.74■■□□□ 1.23
ACVR1B-206ENST00000542485 CTTNBP2Q8WZ74 1663 aa22.72■■□□□ 1.23
ACVR1B-206ENST00000542485 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
ACVR1B-206ENST00000542485 MRC2Q9UBG0 1479 aa22.68■■□□□ 1.22
ACVR1B-206ENST00000542485 FHAD1B1AJZ9 1412 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms