RNA–Protein interactions for RNA: ENST00000542447.6

CADM1-212, Transcript of cell adhesion molecule 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CADM1, Length 4,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-212ENST00000542447 NISCHQ9Y2I1 1504 aa20.01■□□□□ 0.79
CADM1-212ENST00000542447 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
CADM1-212ENST00000542447 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
CADM1-212ENST00000542447 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
CADM1-212ENST00000542447 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
CADM1-212ENST00000542447 DCAF8L2P0C7V8 631 aa19■□□□□ 0.63
CADM1-212ENST00000542447 HRCP23327 699 aa18.95■□□□□ 0.62
CADM1-212ENST00000542447 PELP1Q8IZL8 1130 aaKnown RBP18.8■□□□□ 0.6
CADM1-212ENST00000542447 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
CADM1-212ENST00000542447 LOC105371045A0A1W2PR82 267 aa18.35■□□□□ 0.53
CADM1-212ENST00000542447 FAM9AQ8IZU1 332 aaPredicted RBP18.3■□□□□ 0.52
CADM1-212ENST00000542447 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
CADM1-212ENST00000542447 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
CADM1-212ENST00000542447 MYT1Q01538 1121 aa18.17■□□□□ 0.5
CADM1-212ENST00000542447 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.49
CADM1-212ENST00000542447 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
CADM1-212ENST00000542447 YTHDC1Q96MU7 727 aaKnown RBP18.07■□□□□ 0.48
CADM1-212ENST00000542447 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
CADM1-212ENST00000542447 CENPBP07199 599 aaPredicted RBP17.96■□□□□ 0.47
CADM1-212ENST00000542447 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
CADM1-212ENST00000542447 GTF3C3Q9Y5Q9 886 aa17.87■□□□□ 0.45
CADM1-212ENST00000542447 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
CADM1-212ENST00000542447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
CADM1-212ENST00000542447 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
CADM1-212ENST00000542447 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
CADM1-212ENST00000542447 ACIN1Q9UKV3 1341 aaKnown RBP17.66■□□□□ 0.42
CADM1-212ENST00000542447 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
CADM1-212ENST00000542447 ABCC9O60706 1549 aa17.58■□□□□ 0.4
CADM1-212ENST00000542447 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
CADM1-212ENST00000542447 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
CADM1-212ENST00000542447 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.36
CADM1-212ENST00000542447 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
CADM1-212ENST00000542447 BCANQ96GW7 911 aa17.2■□□□□ 0.34
CADM1-212ENST00000542447 UBTFP17480 764 aaKnown RBP17.16■□□□□ 0.34
CADM1-212ENST00000542447 APLP2Q06481 763 aa17.12■□□□□ 0.33
CADM1-212ENST00000542447 ERICH6Q7L0X2 663 aa17.1■□□□□ 0.33
CADM1-212ENST00000542447 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
CADM1-212ENST00000542447 MIER1Q8N108 512 aa17.03■□□□□ 0.32
CADM1-212ENST00000542447 BCL11AQ9H165 835 aa16.98■□□□□ 0.31
CADM1-212ENST00000542447 NEFLP07196 543 aa16.93■□□□□ 0.3
CADM1-212ENST00000542447 ITGAEP38570 1179 aa16.88■□□□□ 0.29
CADM1-212ENST00000542447 ANP32EQ9BTT0 268 aa16.81■□□□□ 0.28
CADM1-212ENST00000542447 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
CADM1-212ENST00000542447 FKBP8Q14318 412 aa16.71■□□□□ 0.26
CADM1-212ENST00000542447 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
CADM1-212ENST00000542447 SUPT16HQ9Y5B9 1047 aaKnown RBP16.64■□□□□ 0.25
CADM1-212ENST00000542447 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
CADM1-212ENST00000542447 CNGB1Q14028 1251 aaPredicted RBP16.63■□□□□ 0.25
CADM1-212ENST00000542447 ATP1B4Q9UN42 357 aaPredicted RBP16.6■□□□□ 0.25
CADM1-212ENST00000542447 TSHZ2Q9NRE2 1034 aa16.56■□□□□ 0.24
CADM1-212ENST00000542447 TRIM52Q96A61 297 aa16.53■□□□□ 0.24
CADM1-212ENST00000542447 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
CADM1-212ENST00000542447 IRX6P78412 446 aaPredicted RBP16.5■□□□□ 0.23
CADM1-212ENST00000542447 HIRIP3Q9BW71 556 aaPredicted RBP16.46■□□□□ 0.22
CADM1-212ENST00000542447 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
CADM1-212ENST00000542447 NACADO15069 1562 aa16.45■□□□□ 0.22
CADM1-212ENST00000542447 CLSPNQ9HAW4 1339 aa16.42■□□□□ 0.22
CADM1-212ENST00000542447 NBR1Q14596 966 aa16.41■□□□□ 0.22
CADM1-212ENST00000542447 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
CADM1-212ENST00000542447 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
CADM1-212ENST00000542447 KCNH8Q96L42 1107 aa16.35■□□□□ 0.21
CADM1-212ENST00000542447 PRKCSHP14314 528 aaPredicted RBP16.32■□□□□ 0.2
CADM1-212ENST00000542447 RBM19Q9Y4C8 960 aaKnown RBP16.32■□□□□ 0.2
CADM1-212ENST00000542447 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
CADM1-212ENST00000542447 POLR3GLQ9BT43 218 aa16.31■□□□□ 0.2
CADM1-212ENST00000542447 ANP32CO43423 234 aa16.29■□□□□ 0.2
CADM1-212ENST00000542447 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
CADM1-212ENST00000542447 FAM50AQ14320 339 aaKnown RBP16.24■□□□□ 0.19
CADM1-212ENST00000542447 RTN4Q9NQC3 1192 aaKnown RBP16.23■□□□□ 0.19
CADM1-212ENST00000542447 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
CADM1-212ENST00000542447 HNRNPUQ00839 825 aaKnown RBP eCLIP16.23■□□□□ 0.19
CADM1-212ENST00000542447 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
CADM1-212ENST00000542447 EIF5BO60841 1220 aaKnown RBP16.18■□□□□ 0.18
CADM1-212ENST00000542447 NPM2Q86SE8 214 aaKnown RBP16.18■□□□□ 0.18
CADM1-212ENST00000542447 DEKP35659 375 aaKnown RBP16.1■□□□□ 0.17
CADM1-212ENST00000542447 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
CADM1-212ENST00000542447 FAM9BQ8IZU0 186 aa16.07■□□□□ 0.16
CADM1-212ENST00000542447 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.16
CADM1-212ENST00000542447 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.16
CADM1-212ENST00000542447 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.16
CADM1-212ENST00000542447 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
CADM1-212ENST00000542447 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
CADM1-212ENST00000542447 B4GALNT3Q6L9W6 998 aa16■□□□□ 0.15
CADM1-212ENST00000542447 SOGA1O94964 1423 aa16■□□□□ 0.15
CADM1-212ENST00000542447 ZBTB4Q9P1Z0 1013 aaPredicted RBP16■□□□□ 0.15
CADM1-212ENST00000542447 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
CADM1-212ENST00000542447 P3H3Q8IVL6 736 aa15.98■□□□□ 0.15
CADM1-212ENST00000542447 ANO8Q9HCE9 1232 aaPredicted RBP15.97■□□□□ 0.15
CADM1-212ENST00000542447 CLIP1P30622 1438 aa15.95■□□□□ 0.14
CADM1-212ENST00000542447 MYT1LQ9UL68 1186 aa15.94■□□□□ 0.14
CADM1-212ENST00000542447 MSH5O43196 834 aa15.92■□□□□ 0.14
CADM1-212ENST00000542447 ZBTB47Q9UFB7 747 aaPredicted RBP15.92■□□□□ 0.14
CADM1-212ENST00000542447 TNIKQ9UKE5 1360 aa15.92■□□□□ 0.14
CADM1-212ENST00000542447 SALL2Q9Y467 1007 aaPredicted RBP15.91■□□□□ 0.14
CADM1-212ENST00000542447 LAS1LQ9Y4W2 734 aaKnown RBP15.89■□□□□ 0.13
CADM1-212ENST00000542447 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
CADM1-212ENST00000542447 ZNF326Q5BKZ1 582 aaKnown RBP15.87■□□□□ 0.13
CADM1-212ENST00000542447 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
CADM1-212ENST00000542447 NOP58Q9Y2X3 529 aaKnown RBP15.86■□□□□ 0.13
CADM1-212ENST00000542447 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms