RNA–Protein interactions for RNA: ENST00000541511.1

KDM2B-213, Transcript of lysine demethylase 2B, humanhuman

TSL 4

Gene KDM2B, Length 528 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-213ENST00000541511 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.66
KDM2B-213ENST00000541511 CCDC180Q9P1Z9 1646 aa28.08■■■□□ 2.09
KDM2B-213ENST00000541511 ABCC9O60706 1549 aa27.21■■□□□ 1.95
KDM2B-213ENST00000541511 DCAF8L2P0C7V8 631 aa26.5■■□□□ 1.83
KDM2B-213ENST00000541511 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
KDM2B-213ENST00000541511 NACADO15069 1562 aa26.39■■□□□ 1.82
KDM2B-213ENST00000541511 RB1CC1Q8TDY2 1594 aa26.35■■□□□ 1.81
KDM2B-213ENST00000541511 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
KDM2B-213ENST00000541511 DCAF1Q9Y4B6 1507 aa26.27■■□□□ 1.8
KDM2B-213ENST00000541511 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.7
KDM2B-213ENST00000541511 SCRIBQ14160 1630 aa25.59■■□□□ 1.69
KDM2B-213ENST00000541511 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.67
KDM2B-213ENST00000541511 BICRAQ9NZM4 1560 aa25.42■■□□□ 1.66
KDM2B-213ENST00000541511 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
KDM2B-213ENST00000541511 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
KDM2B-213ENST00000541511 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
KDM2B-213ENST00000541511 CC2D2AQ9P2K1 1620 aa24.62■■□□□ 1.53
KDM2B-213ENST00000541511 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
KDM2B-213ENST00000541511 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
KDM2B-213ENST00000541511 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
KDM2B-213ENST00000541511 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
KDM2B-213ENST00000541511 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
KDM2B-213ENST00000541511 ATAD2BQ9ULI0 1458 aa24.34■■□□□ 1.49
KDM2B-213ENST00000541511 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
KDM2B-213ENST00000541511 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
KDM2B-213ENST00000541511 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
KDM2B-213ENST00000541511 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
KDM2B-213ENST00000541511 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
KDM2B-213ENST00000541511 WIZO95785 1651 aa24.13■■□□□ 1.45
KDM2B-213ENST00000541511 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
KDM2B-213ENST00000541511 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
KDM2B-213ENST00000541511 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
KDM2B-213ENST00000541511 LAMC3Q9Y6N6 1575 aa23.65■■□□□ 1.38
KDM2B-213ENST00000541511 CCDC88BA6NC98 1476 aa23.65■■□□□ 1.38
KDM2B-213ENST00000541511 NESP48681 1621 aa23.58■■□□□ 1.36
KDM2B-213ENST00000541511 PDS5BQ9NTI5 1447 aa23.55■■□□□ 1.36
KDM2B-213ENST00000541511 CFTRP13569 1480 aa23.52■■□□□ 1.36
KDM2B-213ENST00000541511 ERCC6Q03468 1493 aa23.52■■□□□ 1.36
KDM2B-213ENST00000541511 PRDM2Q13029 1718 aa23.36■■□□□ 1.33
KDM2B-213ENST00000541511 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
KDM2B-213ENST00000541511 KIF21AQ7Z4S6 1674 aa23.32■■□□□ 1.32
KDM2B-213ENST00000541511 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
KDM2B-213ENST00000541511 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
KDM2B-213ENST00000541511 CUX2O14529 1486 aa23.17■■□□□ 1.3
KDM2B-213ENST00000541511 THOC2Q8NI27 1593 aaKnown RBP23.17■■□□□ 1.3
KDM2B-213ENST00000541511 ABCC8Q09428 1581 aa23.12■■□□□ 1.29
KDM2B-213ENST00000541511 WDR62O43379 1518 aa23.09■■□□□ 1.29
KDM2B-213ENST00000541511 URB2Q14146 1524 aaKnown RBP23.04■■□□□ 1.28
KDM2B-213ENST00000541511 DNMBPQ6XZF7 1577 aa22.99■■□□□ 1.27
KDM2B-213ENST00000541511 TOPBP1Q92547 1522 aa22.98■■□□□ 1.27
KDM2B-213ENST00000541511 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.25
KDM2B-213ENST00000541511 CUX1P39880 1505 aa22.87■■□□□ 1.25
KDM2B-213ENST00000541511 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
KDM2B-213ENST00000541511 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
KDM2B-213ENST00000541511 SOGA1O94964 1423 aa22.78■■□□□ 1.24
KDM2B-213ENST00000541511 FGD5Q6ZNL6 1462 aa22.78■■□□□ 1.24
KDM2B-213ENST00000541511 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
KDM2B-213ENST00000541511 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
KDM2B-213ENST00000541511 SYNJ1O43426 1573 aa22.72■■□□□ 1.23
KDM2B-213ENST00000541511 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
KDM2B-213ENST00000541511 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
KDM2B-213ENST00000541511 WDR97A6NE52 1622 aa22.61■■□□□ 1.21
KDM2B-213ENST00000541511 ZNF608Q9ULD9 1512 aaPredicted RBP22.61■■□□□ 1.21
KDM2B-213ENST00000541511 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
KDM2B-213ENST00000541511 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
KDM2B-213ENST00000541511 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
KDM2B-213ENST00000541511 AQRO60306 1485 aaKnown RBP eCLIP22.55■■□□□ 1.2
KDM2B-213ENST00000541511 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
KDM2B-213ENST00000541511 GAPVD1Q14C86 1478 aa22.5■■□□□ 1.19
KDM2B-213ENST00000541511 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
KDM2B-213ENST00000541511 ABCA5Q8WWZ7 1642 aa22.43■■□□□ 1.18
KDM2B-213ENST00000541511 KIF27Q86VH2 1401 aa22.43■■□□□ 1.18
KDM2B-213ENST00000541511 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
KDM2B-213ENST00000541511 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
KDM2B-213ENST00000541511 PBRM1Q86U86 1689 aa22.38■■□□□ 1.17
KDM2B-213ENST00000541511 SNAPC4Q5SXM2 1469 aa22.35■■□□□ 1.17
KDM2B-213ENST00000541511 ERICH3Q5RHP9 1530 aa22.35■■□□□ 1.17
KDM2B-213ENST00000541511 FBLN2P98095 1184 aa22.34■■□□□ 1.17
KDM2B-213ENST00000541511 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
KDM2B-213ENST00000541511 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
KDM2B-213ENST00000541511 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
KDM2B-213ENST00000541511 FHAD1B1AJZ9 1412 aa22.27■■□□□ 1.16
KDM2B-213ENST00000541511 IGF1RP08069 1367 aa22.25■■□□□ 1.15
KDM2B-213ENST00000541511 CHD1O14646 1710 aa22.22■■□□□ 1.15
KDM2B-213ENST00000541511 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
KDM2B-213ENST00000541511 EEA1Q15075 1411 aa22.2■■□□□ 1.14
KDM2B-213ENST00000541511 CUL7Q14999 1698 aa22.2■■□□□ 1.14
KDM2B-213ENST00000541511 DNAJC5Q9H3Z4 198 aa22.19■■□□□ 1.14
KDM2B-213ENST00000541511 CARMIL1Q5VZK9 1371 aa22.17■■□□□ 1.14
KDM2B-213ENST00000541511 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
KDM2B-213ENST00000541511 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
KDM2B-213ENST00000541511 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
KDM2B-213ENST00000541511 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
KDM2B-213ENST00000541511 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
KDM2B-213ENST00000541511 NUP160Q12769 1436 aa22.03■■□□□ 1.12
KDM2B-213ENST00000541511 PRXQ9BXM0 1461 aa21.98■■□□□ 1.11
KDM2B-213ENST00000541511 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
KDM2B-213ENST00000541511 CEP170Q5SW79 1584 aa21.97■■□□□ 1.11
KDM2B-213ENST00000541511 KIAA0586Q9BVV6 1533 aa21.93■■□□□ 1.1
KDM2B-213ENST00000541511 JPH4Q96JJ6 628 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms