RNA–Protein interactions for RNA: ENST00000541174.6

SLC11A2-204, Transcript of solute carrier family 11 member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC11A2, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A2-204ENST00000541174 NISCHQ9Y2I1 1504 aa30.91■■■□□ 2.54
SLC11A2-204ENST00000541174 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
SLC11A2-204ENST00000541174 SHROOM4Q9ULL8 1493 aa26.09■■□□□ 1.77
SLC11A2-204ENST00000541174 ZCCHC6Q5VYS8 1495 aaKnown RBP26.08■■□□□ 1.77
SLC11A2-204ENST00000541174 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
SLC11A2-204ENST00000541174 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
SLC11A2-204ENST00000541174 DCAF1Q9Y4B6 1507 aa25.33■■□□□ 1.65
SLC11A2-204ENST00000541174 HRCP23327 699 aa25.17■■□□□ 1.62
SLC11A2-204ENST00000541174 ABCC9O60706 1549 aa24.89■■□□□ 1.58
SLC11A2-204ENST00000541174 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
SLC11A2-204ENST00000541174 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
SLC11A2-204ENST00000541174 PELP1Q8IZL8 1130 aaKnown RBP24.6■■□□□ 1.53
SLC11A2-204ENST00000541174 NACADO15069 1562 aa24.55■■□□□ 1.52
SLC11A2-204ENST00000541174 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
SLC11A2-204ENST00000541174 PCGF6Q9BYE7 350 aa24.38■■□□□ 1.49
SLC11A2-204ENST00000541174 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
SLC11A2-204ENST00000541174 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
SLC11A2-204ENST00000541174 PPARGC1BQ86YN6 1023 aaKnown RBP24.24■■□□□ 1.47
SLC11A2-204ENST00000541174 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
SLC11A2-204ENST00000541174 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
SLC11A2-204ENST00000541174 UNC13AQ9UPW8 1703 aa23.99■■□□□ 1.43
SLC11A2-204ENST00000541174 WIZO95785 1651 aa23.92■■□□□ 1.42
SLC11A2-204ENST00000541174 ZEB1P37275 1124 aaPredicted RBP23.9■■□□□ 1.42
SLC11A2-204ENST00000541174 TRIM26Q12899 539 aaPredicted RBP23.9■■□□□ 1.42
SLC11A2-204ENST00000541174 MYT1Q01538 1121 aa23.78■■□□□ 1.4
SLC11A2-204ENST00000541174 BAZ1AQ9NRL2 1556 aaPredicted RBP23.77■■□□□ 1.4
SLC11A2-204ENST00000541174 LOC105371045A0A1W2PR82 267 aa23.72■■□□□ 1.39
SLC11A2-204ENST00000541174 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.38
SLC11A2-204ENST00000541174 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
SLC11A2-204ENST00000541174 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
SLC11A2-204ENST00000541174 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
SLC11A2-204ENST00000541174 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
SLC11A2-204ENST00000541174 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
SLC11A2-204ENST00000541174 FAM9AQ8IZU1 332 aaPredicted RBP23.46■■□□□ 1.35
SLC11A2-204ENST00000541174 EIF4G1Q04637 1599 aaKnown RBP23.42■■□□□ 1.34
SLC11A2-204ENST00000541174 SMARCA2P51531 1590 aa23.38■■□□□ 1.33
SLC11A2-204ENST00000541174 CCDC88BA6NC98 1476 aa23.38■■□□□ 1.33
SLC11A2-204ENST00000541174 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
SLC11A2-204ENST00000541174 ABCC8Q09428 1581 aa23.25■■□□□ 1.31
SLC11A2-204ENST00000541174 ACIN1Q9UKV3 1341 aaKnown RBP23.22■■□□□ 1.31
SLC11A2-204ENST00000541174 PEG3Q9GZU2 1588 aa23.19■■□□□ 1.3
SLC11A2-204ENST00000541174 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
SLC11A2-204ENST00000541174 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
SLC11A2-204ENST00000541174 NEUROD1Q13562 356 aa23■■□□□ 1.27
SLC11A2-204ENST00000541174 CENPBP07199 599 aaPredicted RBP22.99■■□□□ 1.27
SLC11A2-204ENST00000541174 SOGA1O94964 1423 aa22.9■■□□□ 1.26
SLC11A2-204ENST00000541174 GTF3C3Q9Y5Q9 886 aa22.87■■□□□ 1.25
SLC11A2-204ENST00000541174 RUSC2Q8N2Y8 1516 aa22.84■■□□□ 1.25
SLC11A2-204ENST00000541174 WRNQ14191 1432 aaPredicted RBP eCLIP22.83■■□□□ 1.25
SLC11A2-204ENST00000541174 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
SLC11A2-204ENST00000541174 DIEXFQ68CQ4 756 aaKnown RBP22.75■■□□□ 1.23
SLC11A2-204ENST00000541174 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
SLC11A2-204ENST00000541174 NCAPD3P42695 1498 aa22.7■■□□□ 1.22
SLC11A2-204ENST00000541174 CSRNP3Q8WYN3 585 aa22.67■■□□□ 1.22
SLC11A2-204ENST00000541174 CCER1Q8TC90 406 aaPredicted RBP22.64■■□□□ 1.21
SLC11A2-204ENST00000541174 EEA1Q15075 1411 aa22.64■■□□□ 1.21
SLC11A2-204ENST00000541174 CEP162Q5TB80 1403 aa22.59■■□□□ 1.21
SLC11A2-204ENST00000541174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.56■■□□□ 1.2
SLC11A2-204ENST00000541174 UBTFP17480 764 aaKnown RBP22.56■■□□□ 1.2
SLC11A2-204ENST00000541174 TNIKQ9UKE5 1360 aa22.54■■□□□ 1.2
SLC11A2-204ENST00000541174 TOP2BQ02880 1626 aa22.52■■□□□ 1.2
SLC11A2-204ENST00000541174 GOLGA3Q08378 1498 aa22.52■■□□□ 1.2
SLC11A2-204ENST00000541174 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
SLC11A2-204ENST00000541174 TTBK1Q5TCY1 1321 aaPredicted RBP22.45■■□□□ 1.18
SLC11A2-204ENST00000541174 KIF21BO75037 1637 aa22.43■■□□□ 1.18
SLC11A2-204ENST00000541174 CFTRP13569 1480 aa22.43■■□□□ 1.18
SLC11A2-204ENST00000541174 CEP164Q9UPV0 1460 aa22.43■■□□□ 1.18
SLC11A2-204ENST00000541174 CC2D2AQ9P2K1 1620 aa22.42■■□□□ 1.18
SLC11A2-204ENST00000541174 CUX1P39880 1505 aa22.41■■□□□ 1.18
SLC11A2-204ENST00000541174 ZNF316A6NFI3 1004 aaPredicted RBP22.4■■□□□ 1.18
SLC11A2-204ENST00000541174 RAPGEF2Q9Y4G8 1499 aa22.37■■□□□ 1.17
SLC11A2-204ENST00000541174 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
SLC11A2-204ENST00000541174 CLSPNQ9HAW4 1339 aa22.29■■□□□ 1.16
SLC11A2-204ENST00000541174 RANGAP1P46060 587 aaPredicted RBP22.28■■□□□ 1.16
SLC11A2-204ENST00000541174 CLIP1P30622 1438 aa22.25■■□□□ 1.15
SLC11A2-204ENST00000541174 CADPSQ9ULU8 1353 aa22.24■■□□□ 1.15
SLC11A2-204ENST00000541174 PRXQ9BXM0 1461 aa22.16■■□□□ 1.14
SLC11A2-204ENST00000541174 KIF27Q86VH2 1401 aa22.15■■□□□ 1.14
SLC11A2-204ENST00000541174 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
SLC11A2-204ENST00000541174 VPS8Q8N3P4 1428 aa22.09■■□□□ 1.13
SLC11A2-204ENST00000541174 MIER1Q8N108 512 aa22.08■■□□□ 1.13
SLC11A2-204ENST00000541174 NESP48681 1621 aa22.08■■□□□ 1.12
SLC11A2-204ENST00000541174 YTHDC1Q96MU7 727 aaKnown RBP22.07■■□□□ 1.12
SLC11A2-204ENST00000541174 FGD5Q6ZNL6 1462 aa22.06■■□□□ 1.12
SLC11A2-204ENST00000541174 CUX2O14529 1486 aa22.06■■□□□ 1.12
SLC11A2-204ENST00000541174 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
SLC11A2-204ENST00000541174 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
SLC11A2-204ENST00000541174 ARAP1Q96P48 1450 aa21.98■■□□□ 1.11
SLC11A2-204ENST00000541174 IGF1RP08069 1367 aa21.94■■□□□ 1.1
SLC11A2-204ENST00000541174 APLP2Q06481 763 aa21.92■■□□□ 1.1
SLC11A2-204ENST00000541174 ANP32EQ9BTT0 268 aa21.92■■□□□ 1.1
SLC11A2-204ENST00000541174 RAD54L2Q9Y4B4 1467 aa21.9■■□□□ 1.1
SLC11A2-204ENST00000541174 DNMBPQ6XZF7 1577 aa21.9■■□□□ 1.1
SLC11A2-204ENST00000541174 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
SLC11A2-204ENST00000541174 SUPT16HQ9Y5B9 1047 aaKnown RBP21.87■■□□□ 1.09
SLC11A2-204ENST00000541174 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
SLC11A2-204ENST00000541174 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
SLC11A2-204ENST00000541174 CARMIL1Q5VZK9 1371 aa21.84■■□□□ 1.09
SLC11A2-204ENST00000541174 ARHGAP35Q9NRY4 1499 aa21.84■■□□□ 1.09
SLC11A2-204ENST00000541174 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms