RNA–Protein interactions for RNA: ENST00000540533.2

AC005906.2-218, humanhuman

TSL 5

Gene AC005906.2, Length 2,172 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005906.2-218ENST00000540533 NISCHQ9Y2I1 1504 aa29.47■■■□□ 2.31
AC005906.2-218ENST00000540533 CCDC180Q9P1Z9 1646 aa25.65■■□□□ 1.7
AC005906.2-218ENST00000540533 ZCCHC6Q5VYS8 1495 aaKnown RBP24.98■■□□□ 1.59
AC005906.2-218ENST00000540533 ABCC9O60706 1549 aa24.98■■□□□ 1.59
AC005906.2-218ENST00000540533 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
AC005906.2-218ENST00000540533 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
AC005906.2-218ENST00000540533 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
AC005906.2-218ENST00000540533 DCAF8L2P0C7V8 631 aa24.22■■□□□ 1.47
AC005906.2-218ENST00000540533 NACADO15069 1562 aa24.09■■□□□ 1.45
AC005906.2-218ENST00000540533 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
AC005906.2-218ENST00000540533 MYO15BQ96JP2 1530 aa23.98■■□□□ 1.43
AC005906.2-218ENST00000540533 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
AC005906.2-218ENST00000540533 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
AC005906.2-218ENST00000540533 SCRIBQ14160 1630 aa23.45■■□□□ 1.34
AC005906.2-218ENST00000540533 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.34
AC005906.2-218ENST00000540533 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
AC005906.2-218ENST00000540533 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
AC005906.2-218ENST00000540533 HRCP23327 699 aa23.17■■□□□ 1.3
AC005906.2-218ENST00000540533 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
AC005906.2-218ENST00000540533 LOC105371045A0A1W2PR82 267 aa22.91■■□□□ 1.26
AC005906.2-218ENST00000540533 MROH2BQ7Z745 1585 aa22.82■■□□□ 1.24
AC005906.2-218ENST00000540533 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
AC005906.2-218ENST00000540533 TRIM41Q8WV44 630 aa22.78■■□□□ 1.24
AC005906.2-218ENST00000540533 DNAJC5BQ9UF47 199 aa22.76■■□□□ 1.23
AC005906.2-218ENST00000540533 BAZ1AQ9NRL2 1556 aaPredicted RBP22.74■■□□□ 1.23
AC005906.2-218ENST00000540533 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
AC005906.2-218ENST00000540533 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
AC005906.2-218ENST00000540533 WIZO95785 1651 aa22.71■■□□□ 1.23
AC005906.2-218ENST00000540533 CC2D2AQ9P2K1 1620 aa22.58■■□□□ 1.21
AC005906.2-218ENST00000540533 TOP2AP11388 1531 aaKnown RBP22.5■■□□□ 1.19
AC005906.2-218ENST00000540533 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
AC005906.2-218ENST00000540533 PPARGC1BQ86YN6 1023 aaKnown RBP22.43■■□□□ 1.18
AC005906.2-218ENST00000540533 FAM9AQ8IZU1 332 aaPredicted RBP22.4■■□□□ 1.18
AC005906.2-218ENST00000540533 ZEB1P37275 1124 aaPredicted RBP22.39■■□□□ 1.17
AC005906.2-218ENST00000540533 SMARCA2P51531 1590 aa22.32■■□□□ 1.16
AC005906.2-218ENST00000540533 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
AC005906.2-218ENST00000540533 CCDC88BA6NC98 1476 aa22.26■■□□□ 1.15
AC005906.2-218ENST00000540533 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
AC005906.2-218ENST00000540533 PEG3Q9GZU2 1588 aa22.19■■□□□ 1.14
AC005906.2-218ENST00000540533 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
AC005906.2-218ENST00000540533 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
AC005906.2-218ENST00000540533 BAZ1BQ9UIG0 1483 aaKnown RBP22.11■■□□□ 1.13
AC005906.2-218ENST00000540533 EEA1Q15075 1411 aa22.11■■□□□ 1.13
AC005906.2-218ENST00000540533 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
AC005906.2-218ENST00000540533 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
AC005906.2-218ENST00000540533 TNIKQ9UKE5 1360 aa21.95■■□□□ 1.11
AC005906.2-218ENST00000540533 CEP162Q5TB80 1403 aa21.93■■□□□ 1.1
AC005906.2-218ENST00000540533 SOGA1O94964 1423 aa21.91■■□□□ 1.1
AC005906.2-218ENST00000540533 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
AC005906.2-218ENST00000540533 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.09
AC005906.2-218ENST00000540533 KIF21BO75037 1637 aa21.79■■□□□ 1.08
AC005906.2-218ENST00000540533 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.07
AC005906.2-218ENST00000540533 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
AC005906.2-218ENST00000540533 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
AC005906.2-218ENST00000540533 CCER1Q8TC90 406 aaPredicted RBP21.67■■□□□ 1.06
AC005906.2-218ENST00000540533 UBTFP17480 764 aaKnown RBP21.66■■□□□ 1.06
AC005906.2-218ENST00000540533 NESP48681 1621 aa21.65■■□□□ 1.06
AC005906.2-218ENST00000540533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
AC005906.2-218ENST00000540533 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
AC005906.2-218ENST00000540533 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
AC005906.2-218ENST00000540533 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
AC005906.2-218ENST00000540533 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
AC005906.2-218ENST00000540533 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
AC005906.2-218ENST00000540533 CLIP1P30622 1438 aa21.52■■□□□ 1.04
AC005906.2-218ENST00000540533 CFTRP13569 1480 aa21.5■■□□□ 1.03
AC005906.2-218ENST00000540533 VPS8Q8N3P4 1428 aa21.49■■□□□ 1.03
AC005906.2-218ENST00000540533 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
AC005906.2-218ENST00000540533 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
AC005906.2-218ENST00000540533 RAPGEF2Q9Y4G8 1499 aa21.43■■□□□ 1.02
AC005906.2-218ENST00000540533 TTBK1Q5TCY1 1321 aaPredicted RBP21.42■■□□□ 1.02
AC005906.2-218ENST00000540533 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.01
AC005906.2-218ENST00000540533 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
AC005906.2-218ENST00000540533 PRXQ9BXM0 1461 aa21.33■■□□□ 1
AC005906.2-218ENST00000540533 PRDM2Q13029 1718 aa21.33■■□□□ 1
AC005906.2-218ENST00000540533 APLP2Q06481 763 aa21.29■■□□□ 1
AC005906.2-218ENST00000540533 DIEXFQ68CQ4 756 aaKnown RBP21.28■■□□□ 1
AC005906.2-218ENST00000540533 CUX1P39880 1505 aa21.28■■□□□ 1
AC005906.2-218ENST00000540533 THOC2Q8NI27 1593 aaKnown RBP21.26■□□□□ 0.99
AC005906.2-218ENST00000540533 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
AC005906.2-218ENST00000540533 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
AC005906.2-218ENST00000540533 KIF27Q86VH2 1401 aa21.22■□□□□ 0.99
AC005906.2-218ENST00000540533 CUX2O14529 1486 aa21.21■□□□□ 0.99
AC005906.2-218ENST00000540533 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
AC005906.2-218ENST00000540533 ZNF316A6NFI3 1004 aaPredicted RBP21.17■□□□□ 0.98
AC005906.2-218ENST00000540533 PELP1Q8IZL8 1130 aaKnown RBP21.16■□□□□ 0.98
AC005906.2-218ENST00000540533 ACIN1Q9UKV3 1341 aaKnown RBP21.16■□□□□ 0.98
AC005906.2-218ENST00000540533 WDR62O43379 1518 aa21.15■□□□□ 0.98
AC005906.2-218ENST00000540533 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
AC005906.2-218ENST00000540533 HNRNPUL2Q1KMD3 747 aaKnown RBP21.13■□□□□ 0.97
AC005906.2-218ENST00000540533 URB2Q14146 1524 aaKnown RBP21.12■□□□□ 0.97
AC005906.2-218ENST00000540533 CLSPNQ9HAW4 1339 aa21.07■□□□□ 0.96
AC005906.2-218ENST00000540533 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
AC005906.2-218ENST00000540533 RRBP1Q9P2E9 1410 aaKnown RBP21.02■□□□□ 0.95
AC005906.2-218ENST00000540533 NEUROD1Q13562 356 aa21.02■□□□□ 0.95
AC005906.2-218ENST00000540533 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
AC005906.2-218ENST00000540533 RANGAP1P46060 587 aaPredicted RBP21■□□□□ 0.95
AC005906.2-218ENST00000540533 ARHGAP35Q9NRY4 1499 aa20.99■□□□□ 0.95
AC005906.2-218ENST00000540533 MAP3K1Q13233 1512 aa20.94■□□□□ 0.94
AC005906.2-218ENST00000540533 DHX57Q6P158 1386 aaKnown RBP20.91■□□□□ 0.94
AC005906.2-218ENST00000540533 FGD5Q6ZNL6 1462 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 412.4 ms