RNA–Protein interactions for RNA: ENST00000540121.5

PRKAB1-205, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 5 BASIC

Gene PRKAB1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-205ENST00000540121 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
PRKAB1-205ENST00000540121 AEBP2Q6ZN18 517 aaPredicted RBP25.14■■□□□ 1.62
PRKAB1-205ENST00000540121 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
PRKAB1-205ENST00000540121 ABCC9O60706 1549 aa24.61■■□□□ 1.53
PRKAB1-205ENST00000540121 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
PRKAB1-205ENST00000540121 ZCCHC6Q5VYS8 1495 aaKnown RBP24.17■■□□□ 1.46
PRKAB1-205ENST00000540121 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
PRKAB1-205ENST00000540121 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
PRKAB1-205ENST00000540121 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
PRKAB1-205ENST00000540121 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
PRKAB1-205ENST00000540121 MYO15BQ96JP2 1530 aa23.25■■□□□ 1.31
PRKAB1-205ENST00000540121 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
PRKAB1-205ENST00000540121 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
PRKAB1-205ENST00000540121 NACADO15069 1562 aa23.03■■□□□ 1.28
PRKAB1-205ENST00000540121 PABPN1Q86U42 306 aaKnown RBP eCLIP22.79■■□□□ 1.24
PRKAB1-205ENST00000540121 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
PRKAB1-205ENST00000540121 BICRAQ9NZM4 1560 aa22.61■■□□□ 1.21
PRKAB1-205ENST00000540121 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
PRKAB1-205ENST00000540121 SCRIBQ14160 1630 aa22.47■■□□□ 1.19
PRKAB1-205ENST00000540121 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
PRKAB1-205ENST00000540121 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
PRKAB1-205ENST00000540121 EIF4G1Q04637 1599 aaKnown RBP22.1■■□□□ 1.13
PRKAB1-205ENST00000540121 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.12
PRKAB1-205ENST00000540121 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
PRKAB1-205ENST00000540121 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
PRKAB1-205ENST00000540121 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
PRKAB1-205ENST00000540121 HRCP23327 699 aa21.95■■□□□ 1.1
PRKAB1-205ENST00000540121 TRIM41Q8WV44 630 aa21.91■■□□□ 1.1
PRKAB1-205ENST00000540121 LOC105371045A0A1W2PR82 267 aa21.84■■□□□ 1.09
PRKAB1-205ENST00000540121 WIZO95785 1651 aa21.81■■□□□ 1.08
PRKAB1-205ENST00000540121 PCGF6Q9BYE7 350 aa21.75■■□□□ 1.07
PRKAB1-205ENST00000540121 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
PRKAB1-205ENST00000540121 TRIM26Q12899 539 aaPredicted RBP21.73■■□□□ 1.07
PRKAB1-205ENST00000540121 SMARCA4P51532 1647 aa21.72■■□□□ 1.07
PRKAB1-205ENST00000540121 PEG3Q9GZU2 1588 aa21.56■■□□□ 1.04
PRKAB1-205ENST00000540121 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.03
PRKAB1-205ENST00000540121 CUX2O14529 1486 aa21.52■■□□□ 1.03
PRKAB1-205ENST00000540121 SMARCA2P51531 1590 aa21.51■■□□□ 1.03
PRKAB1-205ENST00000540121 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
PRKAB1-205ENST00000540121 EEA1Q15075 1411 aa21.43■■□□□ 1.02
PRKAB1-205ENST00000540121 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1
PRKAB1-205ENST00000540121 ERCC6Q03468 1493 aa21.3■■□□□ 1
PRKAB1-205ENST00000540121 NCAPD3P42695 1498 aa21.27■□□□□ 0.99
PRKAB1-205ENST00000540121 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
PRKAB1-205ENST00000540121 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
PRKAB1-205ENST00000540121 TNIKQ9UKE5 1360 aa21.2■□□□□ 0.98
PRKAB1-205ENST00000540121 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
PRKAB1-205ENST00000540121 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
PRKAB1-205ENST00000540121 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
PRKAB1-205ENST00000540121 HMGXB3Q12766 1538 aa21.07■□□□□ 0.96
PRKAB1-205ENST00000540121 SOGA1O94964 1423 aa21.05■□□□□ 0.96
PRKAB1-205ENST00000540121 GOLGA3Q08378 1498 aa21.02■□□□□ 0.96
PRKAB1-205ENST00000540121 CEP162Q5TB80 1403 aa21.02■□□□□ 0.96
PRKAB1-205ENST00000540121 PPARGC1BQ86YN6 1023 aaKnown RBP21.02■□□□□ 0.95
PRKAB1-205ENST00000540121 NESP48681 1621 aa20.99■□□□□ 0.95
PRKAB1-205ENST00000540121 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
PRKAB1-205ENST00000540121 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
PRKAB1-205ENST00000540121 KIF21BO75037 1637 aa20.96■□□□□ 0.95
PRKAB1-205ENST00000540121 THOC2Q8NI27 1593 aaKnown RBP20.95■□□□□ 0.94
PRKAB1-205ENST00000540121 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
PRKAB1-205ENST00000540121 LAMC3Q9Y6N6 1575 aa20.86■□□□□ 0.93
PRKAB1-205ENST00000540121 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
PRKAB1-205ENST00000540121 RUSC2Q8N2Y8 1516 aa20.86■□□□□ 0.93
PRKAB1-205ENST00000540121 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.93
PRKAB1-205ENST00000540121 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
PRKAB1-205ENST00000540121 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
PRKAB1-205ENST00000540121 PDS5BQ9NTI5 1447 aa20.74■□□□□ 0.91
PRKAB1-205ENST00000540121 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
PRKAB1-205ENST00000540121 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
PRKAB1-205ENST00000540121 CFTRP13569 1480 aa20.71■□□□□ 0.91
PRKAB1-205ENST00000540121 CLIP1P30622 1438 aa20.68■□□□□ 0.9
PRKAB1-205ENST00000540121 VPS8Q8N3P4 1428 aa20.66■□□□□ 0.9
PRKAB1-205ENST00000540121 PRXQ9BXM0 1461 aa20.65■□□□□ 0.9
PRKAB1-205ENST00000540121 CCER1Q8TC90 406 aaPredicted RBP20.62■□□□□ 0.89
PRKAB1-205ENST00000540121 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
PRKAB1-205ENST00000540121 RAPGEF2Q9Y4G8 1499 aa20.59■□□□□ 0.89
PRKAB1-205ENST00000540121 WDR62O43379 1518 aa20.57■□□□□ 0.88
PRKAB1-205ENST00000540121 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
PRKAB1-205ENST00000540121 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
PRKAB1-205ENST00000540121 CUX1P39880 1505 aa20.54■□□□□ 0.88
PRKAB1-205ENST00000540121 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
PRKAB1-205ENST00000540121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.51■□□□□ 0.87
PRKAB1-205ENST00000540121 APLP2Q06481 763 aa20.5■□□□□ 0.87
PRKAB1-205ENST00000540121 OSCARQ8IYS5 282 aa20.39■□□□□ 0.86
PRKAB1-205ENST00000540121 CLSPNQ9HAW4 1339 aa20.38■□□□□ 0.85
PRKAB1-205ENST00000540121 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
PRKAB1-205ENST00000540121 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
PRKAB1-205ENST00000540121 MAP3K1Q13233 1512 aa20.31■□□□□ 0.84
PRKAB1-205ENST00000540121 IGF1RP08069 1367 aa20.29■□□□□ 0.84
PRKAB1-205ENST00000540121 RRBP1Q9P2E9 1410 aaKnown RBP20.23■□□□□ 0.83
PRKAB1-205ENST00000540121 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
PRKAB1-205ENST00000540121 DIEXFQ68CQ4 756 aaKnown RBP20.2■□□□□ 0.82
PRKAB1-205ENST00000540121 PLPPR3Q6T4P5 718 aa20.2■□□□□ 0.82
PRKAB1-205ENST00000540121 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
PRKAB1-205ENST00000540121 TTBK1Q5TCY1 1321 aaPredicted RBP20.19■□□□□ 0.82
PRKAB1-205ENST00000540121 CARMIL1Q5VZK9 1371 aa20.19■□□□□ 0.82
PRKAB1-205ENST00000540121 RIMBP3CA6NJZ7 1639 aa20.18■□□□□ 0.82
PRKAB1-205ENST00000540121 RIMBP3BA6NNM3 1639 aa20.18■□□□□ 0.82
PRKAB1-205ENST00000540121 RIMBP3Q9UFD9 1639 aa20.18■□□□□ 0.82
PRKAB1-205ENST00000540121 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms