RNA–Protein interactions for RNA: ENST00000540108.1

HNF1A-207, Transcript of HNF1 homeobox A, humanhuman

TSL 1 (best)

Gene HNF1A, Length 3,039 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF1A-207ENST00000540108 NISCHQ9Y2I1 1504 aa32.01■■■□□ 2.72
HNF1A-207ENST00000540108 CCDC180Q9P1Z9 1646 aa27.55■■■□□ 2
HNF1A-207ENST00000540108 ZCCHC6Q5VYS8 1495 aaKnown RBP26.97■■□□□ 1.91
HNF1A-207ENST00000540108 SHROOM4Q9ULL8 1493 aa26.78■■□□□ 1.88
HNF1A-207ENST00000540108 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
HNF1A-207ENST00000540108 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
HNF1A-207ENST00000540108 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
HNF1A-207ENST00000540108 ABCC9O60706 1549 aa25.91■■□□□ 1.74
HNF1A-207ENST00000540108 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
HNF1A-207ENST00000540108 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
HNF1A-207ENST00000540108 NACADO15069 1562 aa25.58■■□□□ 1.69
HNF1A-207ENST00000540108 RB1CC1Q8TDY2 1594 aa25.29■■□□□ 1.64
HNF1A-207ENST00000540108 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.61
HNF1A-207ENST00000540108 HRCP23327 699 aa25.02■■□□□ 1.6
HNF1A-207ENST00000540108 CHIC1Q5VXU3 224 aa25.01■■□□□ 1.59
HNF1A-207ENST00000540108 CECR2Q9BXF3 1484 aa24.97■■□□□ 1.59
HNF1A-207ENST00000540108 UNC13AQ9UPW8 1703 aa24.91■■□□□ 1.58
HNF1A-207ENST00000540108 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
HNF1A-207ENST00000540108 PPARGC1BQ86YN6 1023 aaKnown RBP24.82■■□□□ 1.56
HNF1A-207ENST00000540108 WIZO95785 1651 aa24.69■■□□□ 1.54
HNF1A-207ENST00000540108 PCGF6Q9BYE7 350 aa24.67■■□□□ 1.54
HNF1A-207ENST00000540108 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
HNF1A-207ENST00000540108 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
HNF1A-207ENST00000540108 BICRAQ9NZM4 1560 aa24.59■■□□□ 1.53
HNF1A-207ENST00000540108 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
HNF1A-207ENST00000540108 TOP2AP11388 1531 aaKnown RBP24.32■■□□□ 1.48
HNF1A-207ENST00000540108 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
HNF1A-207ENST00000540108 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
HNF1A-207ENST00000540108 CCDC88BA6NC98 1476 aa24.17■■□□□ 1.46
HNF1A-207ENST00000540108 SMARCA2P51531 1590 aa24.15■■□□□ 1.46
HNF1A-207ENST00000540108 EIF4G1Q04637 1599 aaKnown RBP24.11■■□□□ 1.45
HNF1A-207ENST00000540108 PEG3Q9GZU2 1588 aa24.09■■□□□ 1.45
HNF1A-207ENST00000540108 FAM9AQ8IZU1 332 aaPredicted RBP24.02■■□□□ 1.44
HNF1A-207ENST00000540108 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
HNF1A-207ENST00000540108 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
HNF1A-207ENST00000540108 BAZ1BQ9UIG0 1483 aaKnown RBP23.91■■□□□ 1.42
HNF1A-207ENST00000540108 ABCC8Q09428 1581 aa23.91■■□□□ 1.42
HNF1A-207ENST00000540108 SCAF1Q9H7N4 1312 aaKnown RBP23.86■■□□□ 1.41
HNF1A-207ENST00000540108 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
HNF1A-207ENST00000540108 NCAPD3P42695 1498 aa23.65■■□□□ 1.38
HNF1A-207ENST00000540108 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
HNF1A-207ENST00000540108 TRIM26Q12899 539 aaPredicted RBP23.6■■□□□ 1.37
HNF1A-207ENST00000540108 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
HNF1A-207ENST00000540108 SOGA1O94964 1423 aa23.55■■□□□ 1.36
HNF1A-207ENST00000540108 SYNJ1O43426 1573 aa23.5■■□□□ 1.35
HNF1A-207ENST00000540108 RUSC2Q8N2Y8 1516 aa23.47■■□□□ 1.35
HNF1A-207ENST00000540108 EEA1Q15075 1411 aa23.38■■□□□ 1.33
HNF1A-207ENST00000540108 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
HNF1A-207ENST00000540108 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
HNF1A-207ENST00000540108 ZEB1P37275 1124 aaPredicted RBP23.3■■□□□ 1.32
HNF1A-207ENST00000540108 CFTRP13569 1480 aa23.29■■□□□ 1.32
HNF1A-207ENST00000540108 TOP2BQ02880 1626 aa23.29■■□□□ 1.32
HNF1A-207ENST00000540108 BIVM-ERCC5R4GMW8 1640 aa23.23■■□□□ 1.31
HNF1A-207ENST00000540108 UBTFP17480 764 aaKnown RBP23.22■■□□□ 1.31
HNF1A-207ENST00000540108 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.3
HNF1A-207ENST00000540108 NEUROD1Q13562 356 aa23.19■■□□□ 1.3
HNF1A-207ENST00000540108 GOLGA3Q08378 1498 aa23.18■■□□□ 1.3
HNF1A-207ENST00000540108 CEP162Q5TB80 1403 aa23.18■■□□□ 1.3
HNF1A-207ENST00000540108 CUX1P39880 1505 aa23.17■■□□□ 1.3
HNF1A-207ENST00000540108 PRDM2Q13029 1718 aa23.14■■□□□ 1.3
HNF1A-207ENST00000540108 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
HNF1A-207ENST00000540108 ACIN1Q9UKV3 1341 aaKnown RBP23.13■■□□□ 1.29
HNF1A-207ENST00000540108 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
HNF1A-207ENST00000540108 KIF21BO75037 1637 aa23.1■■□□□ 1.29
HNF1A-207ENST00000540108 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
HNF1A-207ENST00000540108 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
HNF1A-207ENST00000540108 MYT1Q01538 1121 aa22.99■■□□□ 1.27
HNF1A-207ENST00000540108 NESP48681 1621 aa22.92■■□□□ 1.26
HNF1A-207ENST00000540108 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
HNF1A-207ENST00000540108 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
HNF1A-207ENST00000540108 TTBK1Q5TCY1 1321 aaPredicted RBP22.89■■□□□ 1.26
HNF1A-207ENST00000540108 CLIP1P30622 1438 aa22.88■■□□□ 1.25
HNF1A-207ENST00000540108 RANGAP1P46060 587 aaPredicted RBP22.88■■□□□ 1.25
HNF1A-207ENST00000540108 PRXQ9BXM0 1461 aa22.88■■□□□ 1.25
HNF1A-207ENST00000540108 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
HNF1A-207ENST00000540108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
HNF1A-207ENST00000540108 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
HNF1A-207ENST00000540108 ERICH3Q5RHP9 1530 aa22.83■■□□□ 1.25
HNF1A-207ENST00000540108 CUX2O14529 1486 aa22.81■■□□□ 1.24
HNF1A-207ENST00000540108 LAMC3Q9Y6N6 1575 aa22.75■■□□□ 1.23
HNF1A-207ENST00000540108 CENPBP07199 599 aaPredicted RBP22.75■■□□□ 1.23
HNF1A-207ENST00000540108 DIEXFQ68CQ4 756 aaKnown RBP22.74■■□□□ 1.23
HNF1A-207ENST00000540108 DNMBPQ6XZF7 1577 aa22.73■■□□□ 1.23
HNF1A-207ENST00000540108 CCER1Q8TC90 406 aaPredicted RBP22.71■■□□□ 1.23
HNF1A-207ENST00000540108 TOPBP1Q92547 1522 aa22.71■■□□□ 1.23
HNF1A-207ENST00000540108 IGF1RP08069 1367 aa22.71■■□□□ 1.23
HNF1A-207ENST00000540108 VPS8Q8N3P4 1428 aa22.71■■□□□ 1.23
HNF1A-207ENST00000540108 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
HNF1A-207ENST00000540108 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
HNF1A-207ENST00000540108 YTHDC1Q96MU7 727 aaKnown RBP22.62■■□□□ 1.21
HNF1A-207ENST00000540108 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
HNF1A-207ENST00000540108 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
HNF1A-207ENST00000540108 CARMIL1Q5VZK9 1371 aa22.6■■□□□ 1.21
HNF1A-207ENST00000540108 ARAP1Q96P48 1450 aa22.59■■□□□ 1.21
HNF1A-207ENST00000540108 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.2
HNF1A-207ENST00000540108 APLP2Q06481 763 aa22.57■■□□□ 1.2
HNF1A-207ENST00000540108 KIF21AQ7Z4S6 1674 aa22.57■■□□□ 1.2
HNF1A-207ENST00000540108 ARHGAP35Q9NRY4 1499 aa22.49■■□□□ 1.19
HNF1A-207ENST00000540108 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
HNF1A-207ENST00000540108 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms