RNA–Protein interactions for RNA: ENST00000540006.5

CARS2-220, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene CARS2, Length 1,485 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARS2-220ENST00000540006 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.77
CARS2-220ENST00000540006 CCDC180Q9P1Z9 1646 aa34.19■■■■□ 3.06
CARS2-220ENST00000540006 ABCC9O60706 1549 aa34.05■■■■□ 3.04
CARS2-220ENST00000540006 DCAF8L2P0C7V8 631 aa32.71■■■□□ 2.83
CARS2-220ENST00000540006 RB1CC1Q8TDY2 1594 aa32.44■■■□□ 2.78
CARS2-220ENST00000540006 NACADO15069 1562 aa32.32■■■□□ 2.76
CARS2-220ENST00000540006 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
CARS2-220ENST00000540006 MYO15BQ96JP2 1530 aa31.97■■■□□ 2.71
CARS2-220ENST00000540006 PABPN1Q86U42 306 aaKnown RBP eCLIP31.92■■■□□ 2.71e-6■■■■■ 29
CARS2-220ENST00000540006 DCAF1Q9Y4B6 1507 aa31.76■■■□□ 2.68
CARS2-220ENST00000540006 DNAJC5BQ9UF47 199 aa31.62■■■□□ 2.65
CARS2-220ENST00000540006 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
CARS2-220ENST00000540006 BICRAQ9NZM4 1560 aa31.49■■■□□ 2.63
CARS2-220ENST00000540006 SCRIBQ14160 1630 aa31.41■■■□□ 2.62
CARS2-220ENST00000540006 SHROOM4Q9ULL8 1493 aa30.99■■■□□ 2.55
CARS2-220ENST00000540006 EIF4G1Q04637 1599 aaKnown RBP30.7■■■□□ 2.5
CARS2-220ENST00000540006 CC2D2AQ9P2K1 1620 aa30.66■■■□□ 2.5
CARS2-220ENST00000540006 CECR2Q9BXF3 1484 aa30.58■■■□□ 2.49
CARS2-220ENST00000540006 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
CARS2-220ENST00000540006 SMARCA4P51532 1647 aa29.92■■■□□ 2.38
CARS2-220ENST00000540006 NCAPD3P42695 1498 aa29.91■■■□□ 2.38
CARS2-220ENST00000540006 BAZ1AQ9NRL2 1556 aaPredicted RBP29.87■■■□□ 2.37
CARS2-220ENST00000540006 SMARCA2P51531 1590 aa29.78■■■□□ 2.36
CARS2-220ENST00000540006 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
CARS2-220ENST00000540006 BAZ1BQ9UIG0 1483 aaKnown RBP29.66■■■□□ 2.34
CARS2-220ENST00000540006 HMGXB3Q12766 1538 aa29.64■■■□□ 2.34
CARS2-220ENST00000540006 PEG3Q9GZU2 1588 aa29.56■■■□□ 2.32
CARS2-220ENST00000540006 WIZO95785 1651 aa29.39■■■□□ 2.3
CARS2-220ENST00000540006 NESP48681 1621 aa29.37■■■□□ 2.29
CARS2-220ENST00000540006 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
CARS2-220ENST00000540006 ERCC6Q03468 1493 aa29.34■■■□□ 2.29
CARS2-220ENST00000540006 CADPSQ9ULU8 1353 aa29.1■■■□□ 2.25
CARS2-220ENST00000540006 LAMC3Q9Y6N6 1575 aa29.08■■■□□ 2.25
CARS2-220ENST00000540006 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
CARS2-220ENST00000540006 PDS5BQ9NTI5 1447 aa29.02■■■□□ 2.24
CARS2-220ENST00000540006 CUX2O14529 1486 aa28.99■■■□□ 2.23
CARS2-220ENST00000540006 KIF21AQ7Z4S6 1674 aa28.83■■■□□ 2.21
CARS2-220ENST00000540006 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
CARS2-220ENST00000540006 CFTRP13569 1480 aa28.8■■■□□ 2.2
CARS2-220ENST00000540006 THOC2Q8NI27 1593 aaKnown RBP28.8■■■□□ 2.2
CARS2-220ENST00000540006 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
CARS2-220ENST00000540006 MRC2Q9UBG0 1479 aa28.7■■■□□ 2.18
CARS2-220ENST00000540006 CEP164Q9UPV0 1460 aa28.7■■■□□ 2.18
CARS2-220ENST00000540006 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
CARS2-220ENST00000540006 DNAJC5Q9H3Z4 198 aa28.59■■■□□ 2.17
CARS2-220ENST00000540006 WDR62O43379 1518 aa28.55■■■□□ 2.16
CARS2-220ENST00000540006 URB2Q14146 1524 aaKnown RBP28.47■■■□□ 2.15
CARS2-220ENST00000540006 PRDM2Q13029 1718 aa28.28■■■□□ 2.12
CARS2-220ENST00000540006 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
CARS2-220ENST00000540006 ABCC8Q09428 1581 aa28.14■■■□□ 2.09
CARS2-220ENST00000540006 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
CARS2-220ENST00000540006 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
CARS2-220ENST00000540006 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.09
CARS2-220ENST00000540006 POLA1P09884 1462 aaPredicted RBP27.98■■■□□ 2.07
CARS2-220ENST00000540006 RAD54L2Q9Y4B4 1467 aa27.96■■■□□ 2.07
CARS2-220ENST00000540006 AQRO60306 1485 aaKnown RBP eCLIP27.94■■■□□ 2.065e-7■■■■■ 30.8
CARS2-220ENST00000540006 OSCARQ8IYS5 282 aa27.94■■■□□ 2.06
CARS2-220ENST00000540006 SOGA1O94964 1423 aa27.94■■■□□ 2.06
CARS2-220ENST00000540006 CUX1P39880 1505 aa27.93■■■□□ 2.06
CARS2-220ENST00000540006 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.05
CARS2-220ENST00000540006 TDRD9Q8NDG6 1382 aaKnown RBP27.88■■■□□ 2.05
CARS2-220ENST00000540006 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
CARS2-220ENST00000540006 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
CARS2-220ENST00000540006 FBLN2P98095 1184 aa27.79■■■□□ 2.04
CARS2-220ENST00000540006 TRIM41Q8WV44 630 aa27.7■■■□□ 2.02
CARS2-220ENST00000540006 WRNQ14191 1432 aaPredicted RBP eCLIP27.69■■■□□ 2.02
CARS2-220ENST00000540006 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
CARS2-220ENST00000540006 CHMP7Q8WUX9 453 aaPredicted RBP27.59■■■□□ 2.01
CARS2-220ENST00000540006 SYNJ1O43426 1573 aa27.57■■■□□ 2
CARS2-220ENST00000540006 GRIN2BQ13224 1484 aa27.56■■■□□ 2
CARS2-220ENST00000540006 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
CARS2-220ENST00000540006 ABCA10Q8WWZ4 1543 aa27.56■■■□□ 2
CARS2-220ENST00000540006 TOP2BQ02880 1626 aa27.53■■■□□ 2
CARS2-220ENST00000540006 WDR97A6NE52 1622 aa27.5■■□□□ 1.99
CARS2-220ENST00000540006 CHD1O14646 1710 aa27.47■■□□□ 1.99
CARS2-220ENST00000540006 BIVM-ERCC5R4GMW8 1640 aa27.47■■□□□ 1.99
CARS2-220ENST00000540006 MAGI1Q96QZ7 1491 aaPredicted RBP27.47■■□□□ 1.99
CARS2-220ENST00000540006 SYNJ2O15056 1496 aa27.4■■□□□ 1.98
CARS2-220ENST00000540006 ABCA5Q8WWZ7 1642 aa27.39■■□□□ 1.98
CARS2-220ENST00000540006 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
CARS2-220ENST00000540006 RIMBP3CA6NJZ7 1639 aa27.35■■□□□ 1.97
CARS2-220ENST00000540006 RIMBP3BA6NNM3 1639 aa27.35■■□□□ 1.97
CARS2-220ENST00000540006 RIMBP3Q9UFD9 1639 aa27.35■■□□□ 1.97
CARS2-220ENST00000540006 CYB5RLQ6IPT4 315 aa27.34■■□□□ 1.97
CARS2-220ENST00000540006 PBRM1Q86U86 1689 aa27.34■■□□□ 1.97
CARS2-220ENST00000540006 FHAD1B1AJZ9 1412 aa27.22■■□□□ 1.95
CARS2-220ENST00000540006 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
CARS2-220ENST00000540006 GRIN2AQ12879 1464 aa27.2■■□□□ 1.94
CARS2-220ENST00000540006 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
CARS2-220ENST00000540006 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
CARS2-220ENST00000540006 ARAP1Q96P48 1450 aa27.15■■□□□ 1.94
CARS2-220ENST00000540006 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
CARS2-220ENST00000540006 IGF1RP08069 1367 aa27.11■■□□□ 1.93
CARS2-220ENST00000540006 NUP160Q12769 1436 aa27.07■■□□□ 1.92
CARS2-220ENST00000540006 CEP170Q5SW79 1584 aa27.06■■□□□ 1.92
CARS2-220ENST00000540006 JPH4Q96JJ6 628 aa26.96■■□□□ 1.91
CARS2-220ENST00000540006 ERCC6L2Q5T890 1561 aa26.93■■□□□ 1.9
CARS2-220ENST00000540006 CARMIL1Q5VZK9 1371 aa26.93■■□□□ 1.9
CARS2-220ENST00000540006 TRHP20396 242 aaPredicted RBP26.91■■□□□ 1.9
CARS2-220ENST00000540006 RUSC2Q8N2Y8 1516 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms