RNA–Protein interactions for RNA: ENST00000539653.5

AC025419.1-204, humanhuman

TSL 3 BASIC

Gene AC025419.1, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025419.1-204ENST00000539653 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
AC025419.1-204ENST00000539653 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
AC025419.1-204ENST00000539653 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
AC025419.1-204ENST00000539653 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
AC025419.1-204ENST00000539653 FOXD1Q16676 465 aa18.58■□□□□ 0.56
AC025419.1-204ENST00000539653 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
AC025419.1-204ENST00000539653 MSH5O43196 834 aa17.37■□□□□ 0.37
AC025419.1-204ENST00000539653 PPP6R1Q9UPN7 881 aa17.32■□□□□ 0.36
AC025419.1-204ENST00000539653 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
AC025419.1-204ENST00000539653 ADRA2BP18089 450 aa17.25■□□□□ 0.35
AC025419.1-204ENST00000539653 POTEDQ86YR6 584 aa17.23■□□□□ 0.35
AC025419.1-204ENST00000539653 NISCHQ9Y2I1 1504 aa16.43■□□□□ 0.22
AC025419.1-204ENST00000539653 MAPK8IP2Q13387 824 aaPredicted RBP15.9■□□□□ 0.14
AC025419.1-204ENST00000539653 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
AC025419.1-204ENST00000539653 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
AC025419.1-204ENST00000539653 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
AC025419.1-204ENST00000539653 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
AC025419.1-204ENST00000539653 HOXD11P31277 338 aaPredicted RBP15.11■□□□□ 0.01
AC025419.1-204ENST00000539653 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
AC025419.1-204ENST00000539653 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
AC025419.1-204ENST00000539653 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
AC025419.1-204ENST00000539653 ABCC9O60706 1549 aa14.94□□□□□ -0.02
AC025419.1-204ENST00000539653 RNF39Q9H2S5 420 aa14.84□□□□□ -0.03
AC025419.1-204ENST00000539653 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
AC025419.1-204ENST00000539653 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
AC025419.1-204ENST00000539653 C1QBPQ07021 282 aaKnown RBP14.59□□□□□ -0.07
AC025419.1-204ENST00000539653 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
AC025419.1-204ENST00000539653 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
AC025419.1-204ENST00000539653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.1
AC025419.1-204ENST00000539653 DCAF8L2P0C7V8 631 aa14.25□□□□□ -0.13
AC025419.1-204ENST00000539653 KCNA4P22459 653 aa14.16□□□□□ -0.14
AC025419.1-204ENST00000539653 RB1CC1Q8TDY2 1594 aa14.12□□□□□ -0.15
AC025419.1-204ENST00000539653 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
AC025419.1-204ENST00000539653 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
AC025419.1-204ENST00000539653 NACADO15069 1562 aa13.99□□□□□ -0.17
AC025419.1-204ENST00000539653 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
AC025419.1-204ENST00000539653 CAPN15O75808 1086 aa13.93□□□□□ -0.18
AC025419.1-204ENST00000539653 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
AC025419.1-204ENST00000539653 DSG3P32926 999 aa13.87□□□□□ -0.19
AC025419.1-204ENST00000539653 MYO15BQ96JP2 1530 aa13.71□□□□□ -0.21
AC025419.1-204ENST00000539653 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
AC025419.1-204ENST00000539653 ABCB7O75027 752 aa13.63□□□□□ -0.23
AC025419.1-204ENST00000539653 BICRAQ9NZM4 1560 aa13.62□□□□□ -0.23
AC025419.1-204ENST00000539653 APLP2Q06481 763 aa13.61□□□□□ -0.23
AC025419.1-204ENST00000539653 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
AC025419.1-204ENST00000539653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.59□□□□□ -0.23
AC025419.1-204ENST00000539653 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
AC025419.1-204ENST00000539653 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
AC025419.1-204ENST00000539653 ZCCHC6Q5VYS8 1495 aaKnown RBP13.55□□□□□ -0.24
AC025419.1-204ENST00000539653 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
AC025419.1-204ENST00000539653 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
AC025419.1-204ENST00000539653 POTEHQ6S545 545 aa13.47□□□□□ -0.25
AC025419.1-204ENST00000539653 CECR2Q9BXF3 1484 aa13.46□□□□□ -0.25
AC025419.1-204ENST00000539653 SCRIBQ14160 1630 aa13.46□□□□□ -0.26
AC025419.1-204ENST00000539653 SHROOM4Q9ULL8 1493 aa13.45□□□□□ -0.26
AC025419.1-204ENST00000539653 CC2D2AQ9P2K1 1620 aa13.4□□□□□ -0.26
AC025419.1-204ENST00000539653 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
AC025419.1-204ENST00000539653 EIF4G1Q04637 1599 aaKnown RBP13.34□□□□□ -0.27
AC025419.1-204ENST00000539653 SLC4A1APQ9BWU0 796 aaKnown RBP13.31□□□□□ -0.28
AC025419.1-204ENST00000539653 POLA2Q14181 598 aa13.29□□□□□ -0.28
AC025419.1-204ENST00000539653 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
AC025419.1-204ENST00000539653 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
AC025419.1-204ENST00000539653 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
AC025419.1-204ENST00000539653 DNAJC5Q9H3Z4 198 aa13.09□□□□□ -0.31
AC025419.1-204ENST00000539653 ZBTB22O15209 634 aa13.04□□□□□ -0.32
AC025419.1-204ENST00000539653 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
AC025419.1-204ENST00000539653 ERCC6Q03468 1493 aa12.96□□□□□ -0.34
AC025419.1-204ENST00000539653 NCAPD3P42695 1498 aa12.95□□□□□ -0.34
AC025419.1-204ENST00000539653 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
AC025419.1-204ENST00000539653 ATAD2BQ9ULI0 1458 aa12.89□□□□□ -0.35
AC025419.1-204ENST00000539653 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
AC025419.1-204ENST00000539653 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
AC025419.1-204ENST00000539653 CUX2O14529 1486 aa12.86□□□□□ -0.35
AC025419.1-204ENST00000539653 SMARCA2P51531 1590 aa12.84□□□□□ -0.35
AC025419.1-204ENST00000539653 BAZ1BQ9UIG0 1483 aaKnown RBP12.79□□□□□ -0.36
AC025419.1-204ENST00000539653 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
AC025419.1-204ENST00000539653 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
AC025419.1-204ENST00000539653 NESP48681 1621 aa12.77□□□□□ -0.36
AC025419.1-204ENST00000539653 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
AC025419.1-204ENST00000539653 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
AC025419.1-204ENST00000539653 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
AC025419.1-204ENST00000539653 PIP4P2Q8N4L2 257 aa12.68□□□□□ -0.38
AC025419.1-204ENST00000539653 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
AC025419.1-204ENST00000539653 MROH2BQ7Z745 1585 aa12.66□□□□□ -0.38
AC025419.1-204ENST00000539653 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
AC025419.1-204ENST00000539653 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
AC025419.1-204ENST00000539653 LAMC3Q9Y6N6 1575 aa12.62□□□□□ -0.39
AC025419.1-204ENST00000539653 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
AC025419.1-204ENST00000539653 FBLN2P98095 1184 aa12.59□□□□□ -0.39
AC025419.1-204ENST00000539653 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
AC025419.1-204ENST00000539653 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
AC025419.1-204ENST00000539653 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
AC025419.1-204ENST00000539653 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
AC025419.1-204ENST00000539653 MKRN4PQ13434 485 aaPredicted RBP12.55□□□□□ -0.4
AC025419.1-204ENST00000539653 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
AC025419.1-204ENST00000539653 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
AC025419.1-204ENST00000539653 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.4
AC025419.1-204ENST00000539653 MRC2Q9UBG0 1479 aa12.5□□□□□ -0.41
AC025419.1-204ENST00000539653 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
AC025419.1-204ENST00000539653 HAX1O00165 279 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms