RNA–Protein interactions for RNA: ENST00000539609.7

ZEB2-224, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 2 BASIC

Gene ZEB2, Length 4,061 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-224ENST00000539609 NISCHQ9Y2I1 1504 aa21.19■□□□□ 0.98
ZEB2-224ENST00000539609 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
ZEB2-224ENST00000539609 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
ZEB2-224ENST00000539609 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
ZEB2-224ENST00000539609 ABCC9O60706 1549 aa18.13■□□□□ 0.49
ZEB2-224ENST00000539609 CCDC180Q9P1Z9 1646 aa17.97■□□□□ 0.47
ZEB2-224ENST00000539609 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
ZEB2-224ENST00000539609 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
ZEB2-224ENST00000539609 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
ZEB2-224ENST00000539609 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
ZEB2-224ENST00000539609 NACADO15069 1562 aa17.2■□□□□ 0.34
ZEB2-224ENST00000539609 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
ZEB2-224ENST00000539609 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
ZEB2-224ENST00000539609 TRIM41Q8WV44 630 aa17.07■□□□□ 0.32
ZEB2-224ENST00000539609 FAM9AQ8IZU1 332 aaPredicted RBP17.05■□□□□ 0.32
ZEB2-224ENST00000539609 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
ZEB2-224ENST00000539609 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
ZEB2-224ENST00000539609 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.25
ZEB2-224ENST00000539609 RSF1Q96T23 1441 aaPredicted RBP16.63■□□□□ 0.25
ZEB2-224ENST00000539609 RANGAP1P46060 587 aaPredicted RBP16.62■□□□□ 0.25
ZEB2-224ENST00000539609 APLP2Q06481 763 aa16.6■□□□□ 0.25
ZEB2-224ENST00000539609 CECR2Q9BXF3 1484 aa16.59■□□□□ 0.25
ZEB2-224ENST00000539609 BAZ1AQ9NRL2 1556 aaPredicted RBP16.52■□□□□ 0.24
ZEB2-224ENST00000539609 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
ZEB2-224ENST00000539609 LOC105371045A0A1W2PR82 267 aa16.4■□□□□ 0.22
ZEB2-224ENST00000539609 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
ZEB2-224ENST00000539609 ATP1B4Q9UN42 357 aaPredicted RBP16.37■□□□□ 0.21
ZEB2-224ENST00000539609 TTBK1Q5TCY1 1321 aaPredicted RBP16.37■□□□□ 0.21
ZEB2-224ENST00000539609 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
ZEB2-224ENST00000539609 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
ZEB2-224ENST00000539609 ATAD2BQ9ULI0 1458 aa16.15■□□□□ 0.18
ZEB2-224ENST00000539609 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
ZEB2-224ENST00000539609 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
ZEB2-224ENST00000539609 WIZO95785 1651 aa16.13■□□□□ 0.17
ZEB2-224ENST00000539609 FBLN2P98095 1184 aa16.13■□□□□ 0.17
ZEB2-224ENST00000539609 PPARGC1BQ86YN6 1023 aaKnown RBP16.11■□□□□ 0.17
ZEB2-224ENST00000539609 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
ZEB2-224ENST00000539609 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
ZEB2-224ENST00000539609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
ZEB2-224ENST00000539609 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
ZEB2-224ENST00000539609 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
ZEB2-224ENST00000539609 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
ZEB2-224ENST00000539609 BICRAQ9NZM4 1560 aa16.01■□□□□ 0.15
ZEB2-224ENST00000539609 ERCC6Q03468 1493 aa15.95■□□□□ 0.14
ZEB2-224ENST00000539609 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
ZEB2-224ENST00000539609 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
ZEB2-224ENST00000539609 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
ZEB2-224ENST00000539609 P3H3Q8IVL6 736 aa15.88■□□□□ 0.13
ZEB2-224ENST00000539609 TRIM26Q12899 539 aaPredicted RBP15.86■□□□□ 0.13
ZEB2-224ENST00000539609 EEA1Q15075 1411 aa15.83■□□□□ 0.12
ZEB2-224ENST00000539609 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
ZEB2-224ENST00000539609 CHMP7Q8WUX9 453 aaPredicted RBP15.81■□□□□ 0.12
ZEB2-224ENST00000539609 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
ZEB2-224ENST00000539609 HRCP23327 699 aa15.81■□□□□ 0.12
ZEB2-224ENST00000539609 ITGAEP38570 1179 aa15.79■□□□□ 0.12
ZEB2-224ENST00000539609 ABCC8Q09428 1581 aa15.78■□□□□ 0.12
ZEB2-224ENST00000539609 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
ZEB2-224ENST00000539609 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
ZEB2-224ENST00000539609 CUX2O14529 1486 aa15.7■□□□□ 0.1
ZEB2-224ENST00000539609 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
ZEB2-224ENST00000539609 SOGA1O94964 1423 aa15.7■□□□□ 0.1
ZEB2-224ENST00000539609 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
ZEB2-224ENST00000539609 ARID3CA6NKF2 412 aa15.69■□□□□ 0.1
ZEB2-224ENST00000539609 HMGXB3Q12766 1538 aa15.69■□□□□ 0.1
ZEB2-224ENST00000539609 MYT1LQ9UL68 1186 aa15.68■□□□□ 0.1
ZEB2-224ENST00000539609 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
ZEB2-224ENST00000539609 GOLGA3Q08378 1498 aa15.65■□□□□ 0.1
ZEB2-224ENST00000539609 TDRD9Q8NDG6 1382 aaKnown RBP15.63■□□□□ 0.09
ZEB2-224ENST00000539609 FAM50AQ14320 339 aaKnown RBP15.63■□□□□ 0.09
ZEB2-224ENST00000539609 ZEB1P37275 1124 aaPredicted RBP15.63■□□□□ 0.09
ZEB2-224ENST00000539609 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
ZEB2-224ENST00000539609 CLIP1P30622 1438 aa15.6■□□□□ 0.09
ZEB2-224ENST00000539609 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
ZEB2-224ENST00000539609 CFTRP13569 1480 aa15.58■□□□□ 0.09
ZEB2-224ENST00000539609 TNIKQ9UKE5 1360 aa15.55■□□□□ 0.08
ZEB2-224ENST00000539609 NESP48681 1621 aa15.55■□□□□ 0.08
ZEB2-224ENST00000539609 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
ZEB2-224ENST00000539609 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
ZEB2-224ENST00000539609 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
ZEB2-224ENST00000539609 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
ZEB2-224ENST00000539609 ZNF777Q9ULD5 760 aaPredicted RBP15.42■□□□□ 0.06
ZEB2-224ENST00000539609 RUSC2Q8N2Y8 1516 aa15.41■□□□□ 0.06
ZEB2-224ENST00000539609 RAD54L2Q9Y4B4 1467 aa15.39■□□□□ 0.05
ZEB2-224ENST00000539609 MTUS2Q5JR59 1369 aa15.39■□□□□ 0.05
ZEB2-224ENST00000539609 TRIM52Q96A61 297 aa15.36■□□□□ 0.05
ZEB2-224ENST00000539609 RAPGEF2Q9Y4G8 1499 aa15.35■□□□□ 0.05
ZEB2-224ENST00000539609 LAMC3Q9Y6N6 1575 aa15.33■□□□□ 0.04
ZEB2-224ENST00000539609 IGF1RP08069 1367 aa15.33■□□□□ 0.04
ZEB2-224ENST00000539609 PLEKHD1A6NEE1 506 aa15.33■□□□□ 0.04
ZEB2-224ENST00000539609 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
ZEB2-224ENST00000539609 GAPVD1Q14C86 1478 aa15.32■□□□□ 0.04
ZEB2-224ENST00000539609 TOPBP1Q92547 1522 aa15.31■□□□□ 0.04
ZEB2-224ENST00000539609 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
ZEB2-224ENST00000539609 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.041e-6■■■□□ 19.1
ZEB2-224ENST00000539609 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
ZEB2-224ENST00000539609 CUX1P39880 1505 aa15.28■□□□□ 0.04
ZEB2-224ENST00000539609 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
ZEB2-224ENST00000539609 CARMIL2Q6F5E8 1435 aa15.25■□□□□ 0.03
ZEB2-224ENST00000539609 JPH4Q96JJ6 628 aa15.25■□□□□ 0.03
ZEB2-224ENST00000539609 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms