RNA–Protein interactions for RNA: ENST00000538581.6

AMT-221, Transcript of aminomethyltransferase, humanhuman

TSL 2 BASIC

Gene AMT, Length 2,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-221ENST00000538581 NISCHQ9Y2I1 1504 aa28.37■■■□□ 2.13
AMT-221ENST00000538581 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
AMT-221ENST00000538581 ZCCHC6Q5VYS8 1495 aaKnown RBP23.82■■□□□ 1.4
AMT-221ENST00000538581 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
AMT-221ENST00000538581 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
AMT-221ENST00000538581 ABCC9O60706 1549 aa23.36■■□□□ 1.33
AMT-221ENST00000538581 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
AMT-221ENST00000538581 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
AMT-221ENST00000538581 NACADO15069 1562 aa23.02■■□□□ 1.28
AMT-221ENST00000538581 HRCP23327 699 aa23.01■■□□□ 1.27
AMT-221ENST00000538581 PELP1Q8IZL8 1130 aaKnown RBP22.91■■□□□ 1.26
AMT-221ENST00000538581 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
AMT-221ENST00000538581 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
AMT-221ENST00000538581 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
AMT-221ENST00000538581 UNC13AQ9UPW8 1703 aa22.27■■□□□ 1.16
AMT-221ENST00000538581 MYT1Q01538 1121 aa22.24■■□□□ 1.15
AMT-221ENST00000538581 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
AMT-221ENST00000538581 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
AMT-221ENST00000538581 PCGF6Q9BYE7 350 aa22.1■■□□□ 1.13
AMT-221ENST00000538581 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.123e-6■■■■□ 23.3
AMT-221ENST00000538581 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
AMT-221ENST00000538581 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
AMT-221ENST00000538581 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
AMT-221ENST00000538581 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
AMT-221ENST00000538581 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
AMT-221ENST00000538581 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
AMT-221ENST00000538581 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
AMT-221ENST00000538581 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
AMT-221ENST00000538581 WIZO95785 1651 aa21.71■■□□□ 1.07
AMT-221ENST00000538581 TRIM26Q12899 539 aaPredicted RBP21.63■■□□□ 1.05
AMT-221ENST00000538581 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
AMT-221ENST00000538581 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
AMT-221ENST00000538581 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.02
AMT-221ENST00000538581 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
AMT-221ENST00000538581 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
AMT-221ENST00000538581 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
AMT-221ENST00000538581 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
AMT-221ENST00000538581 NCAPD3P42695 1498 aa21.28■■□□□ 1
AMT-221ENST00000538581 ACIN1Q9UKV3 1341 aaKnown RBP21.28■■□□□ 1
AMT-221ENST00000538581 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
AMT-221ENST00000538581 CC2D2AQ9P2K1 1620 aa21.12■□□□□ 0.97
AMT-221ENST00000538581 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
AMT-221ENST00000538581 NEUROD1Q13562 356 aa21.04■□□□□ 0.96
AMT-221ENST00000538581 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
AMT-221ENST00000538581 CENPBP07199 599 aaPredicted RBP21.03■□□□□ 0.96
AMT-221ENST00000538581 TRIM41Q8WV44 630 aa21.01■□□□□ 0.95
AMT-221ENST00000538581 GTF3C3Q9Y5Q9 886 aa20.95■□□□□ 0.94
AMT-221ENST00000538581 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
AMT-221ENST00000538581 CFTRP13569 1480 aa20.81■□□□□ 0.92
AMT-221ENST00000538581 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
AMT-221ENST00000538581 WRNQ14191 1432 aaPredicted RBP eCLIP20.74■□□□□ 0.91
AMT-221ENST00000538581 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
AMT-221ENST00000538581 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
AMT-221ENST00000538581 FAM9AQ8IZU1 332 aaPredicted RBP20.61■□□□□ 0.89
AMT-221ENST00000538581 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
AMT-221ENST00000538581 PRDM2Q13029 1718 aa20.58■□□□□ 0.89
AMT-221ENST00000538581 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
AMT-221ENST00000538581 NESP48681 1621 aa20.51■□□□□ 0.87
AMT-221ENST00000538581 LAMC3Q9Y6N6 1575 aa20.51■□□□□ 0.87
AMT-221ENST00000538581 SOGA1O94964 1423 aa20.49■□□□□ 0.87
AMT-221ENST00000538581 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
AMT-221ENST00000538581 FANCD2Q9BXW9 1451 aa20.49■□□□□ 0.87
AMT-221ENST00000538581 CUX1P39880 1505 aa20.48■□□□□ 0.87
AMT-221ENST00000538581 EEA1Q15075 1411 aa20.46■□□□□ 0.87
AMT-221ENST00000538581 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
AMT-221ENST00000538581 CLSPNQ9HAW4 1339 aa20.42■□□□□ 0.86
AMT-221ENST00000538581 RUSC2Q8N2Y8 1516 aa20.4■□□□□ 0.86
AMT-221ENST00000538581 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
AMT-221ENST00000538581 CSRNP3Q8WYN3 585 aa20.38■□□□□ 0.85
AMT-221ENST00000538581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.36■□□□□ 0.85
AMT-221ENST00000538581 CEP164Q9UPV0 1460 aa20.34■□□□□ 0.85
AMT-221ENST00000538581 ZNF316A6NFI3 1004 aaPredicted RBP20.31■□□□□ 0.84
AMT-221ENST00000538581 EHMT2Q96KQ7 1210 aa20.3■□□□□ 0.84
AMT-221ENST00000538581 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
AMT-221ENST00000538581 BCL11AQ9H165 835 aa20.28■□□□□ 0.84
AMT-221ENST00000538581 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
AMT-221ENST00000538581 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
AMT-221ENST00000538581 ANP32EQ9BTT0 268 aa20.24■□□□□ 0.83
AMT-221ENST00000538581 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
AMT-221ENST00000538581 KIF27Q86VH2 1401 aa20.22■□□□□ 0.83
AMT-221ENST00000538581 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
AMT-221ENST00000538581 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
AMT-221ENST00000538581 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
AMT-221ENST00000538581 KIF21BO75037 1637 aa20.15■□□□□ 0.82
AMT-221ENST00000538581 CUX2O14529 1486 aa20.14■□□□□ 0.82
AMT-221ENST00000538581 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
AMT-221ENST00000538581 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
AMT-221ENST00000538581 RAD54L2Q9Y4B4 1467 aa20.1■□□□□ 0.81
AMT-221ENST00000538581 MRC2Q9UBG0 1479 aa20.1■□□□□ 0.81
AMT-221ENST00000538581 ABCA10Q8WWZ4 1543 aa20.09■□□□□ 0.81
AMT-221ENST00000538581 PRXQ9BXM0 1461 aa20.08■□□□□ 0.81
AMT-221ENST00000538581 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
AMT-221ENST00000538581 IGF1RP08069 1367 aa20.06■□□□□ 0.8
AMT-221ENST00000538581 YTHDC1Q96MU7 727 aaKnown RBP20.06■□□□□ 0.8
AMT-221ENST00000538581 MIER1Q8N108 512 aa20.05■□□□□ 0.8
AMT-221ENST00000538581 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.8
AMT-221ENST00000538581 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
AMT-221ENST00000538581 CEP162Q5TB80 1403 aa20■□□□□ 0.79
AMT-221ENST00000538581 SUPT16HQ9Y5B9 1047 aaKnown RBP19.98■□□□□ 0.79
AMT-221ENST00000538581 WDR62O43379 1518 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms