RNA–Protein interactions for RNA: ENST00000538408.1

AC027544.1-201, humanhuman

BASIC

Gene AC027544.1, Length 433 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027544.1-201ENST00000538408 AEBP2Q6ZN18 517 aaPredicted RBP27.72■■■□□ 2.03
AC027544.1-201ENST00000538408 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
AC027544.1-201ENST00000538408 SENP3Q9H4L4 574 aaPredicted RBP23.82■■□□□ 1.4
AC027544.1-201ENST00000538408 PHF23Q9BUL5 403 aaPredicted RBP23.41■■□□□ 1.34
AC027544.1-201ENST00000538408 FOXD1Q16676 465 aa22.2■■□□□ 1.14
AC027544.1-201ENST00000538408 POTEDQ86YR6 584 aa21.36■■□□□ 1.01
AC027544.1-201ENST00000538408 MSH5O43196 834 aa21.06■□□□□ 0.96
AC027544.1-201ENST00000538408 PIAS4Q8N2W9 510 aaPredicted RBP20.66■□□□□ 0.9
AC027544.1-201ENST00000538408 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
AC027544.1-201ENST00000538408 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
AC027544.1-201ENST00000538408 ADRA2BP18089 450 aa20.26■□□□□ 0.83
AC027544.1-201ENST00000538408 NISCHQ9Y2I1 1504 aa19.74■□□□□ 0.75
AC027544.1-201ENST00000538408 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
AC027544.1-201ENST00000538408 MAPK8IP2Q13387 824 aaPredicted RBP18.75■□□□□ 0.59
AC027544.1-201ENST00000538408 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
AC027544.1-201ENST00000538408 CACNB1Q02641 598 aaPredicted RBP18.38■□□□□ 0.53
AC027544.1-201ENST00000538408 DCAF8L1A6NGE4 600 aa18.07■□□□□ 0.48
AC027544.1-201ENST00000538408 HOXD11P31277 338 aaPredicted RBP17.89■□□□□ 0.45
AC027544.1-201ENST00000538408 RNF39Q9H2S5 420 aa17.88■□□□□ 0.45
AC027544.1-201ENST00000538408 PPP4R3CPQ6ZMV5 832 aa17.86■□□□□ 0.45
AC027544.1-201ENST00000538408 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
AC027544.1-201ENST00000538408 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
AC027544.1-201ENST00000538408 C1QBPQ07021 282 aaKnown RBP17.63■□□□□ 0.41
AC027544.1-201ENST00000538408 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
AC027544.1-201ENST00000538408 CCDC180Q9P1Z9 1646 aa17.2■□□□□ 0.34
AC027544.1-201ENST00000538408 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
AC027544.1-201ENST00000538408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
AC027544.1-201ENST00000538408 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
AC027544.1-201ENST00000538408 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
AC027544.1-201ENST00000538408 POTEHQ6S545 545 aa16.67■□□□□ 0.26
AC027544.1-201ENST00000538408 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
AC027544.1-201ENST00000538408 CAPN15O75808 1086 aa16.57■□□□□ 0.24
AC027544.1-201ENST00000538408 DSG3P32926 999 aa16.56■□□□□ 0.24
AC027544.1-201ENST00000538408 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
AC027544.1-201ENST00000538408 DCAF1Q9Y4B6 1507 aa16.4■□□□□ 0.22
AC027544.1-201ENST00000538408 APLP2Q06481 763 aa16.22■□□□□ 0.19
AC027544.1-201ENST00000538408 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
AC027544.1-201ENST00000538408 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
AC027544.1-201ENST00000538408 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
AC027544.1-201ENST00000538408 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
AC027544.1-201ENST00000538408 ABCB7O75027 752 aa16.09■□□□□ 0.17
AC027544.1-201ENST00000538408 ABCC9O60706 1549 aa16.08■□□□□ 0.16
AC027544.1-201ENST00000538408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
AC027544.1-201ENST00000538408 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
AC027544.1-201ENST00000538408 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
AC027544.1-201ENST00000538408 KCNA4P22459 653 aa15.95■□□□□ 0.14
AC027544.1-201ENST00000538408 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
AC027544.1-201ENST00000538408 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
AC027544.1-201ENST00000538408 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
AC027544.1-201ENST00000538408 NACADO15069 1562 aa15.83■□□□□ 0.12
AC027544.1-201ENST00000538408 SCRIBQ14160 1630 aa15.71■□□□□ 0.11
AC027544.1-201ENST00000538408 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
AC027544.1-201ENST00000538408 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
AC027544.1-201ENST00000538408 POLA2Q14181 598 aa15.62■□□□□ 0.09
AC027544.1-201ENST00000538408 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
AC027544.1-201ENST00000538408 MYCNP04198 464 aaPredicted RBP15.54■□□□□ 0.08
AC027544.1-201ENST00000538408 UNC13AQ9UPW8 1703 aa15.47■□□□□ 0.07
AC027544.1-201ENST00000538408 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
AC027544.1-201ENST00000538408 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
AC027544.1-201ENST00000538408 AKT1S1Q96B36 256 aa15.39■□□□□ 0.05
AC027544.1-201ENST00000538408 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
AC027544.1-201ENST00000538408 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
AC027544.1-201ENST00000538408 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
AC027544.1-201ENST00000538408 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
AC027544.1-201ENST00000538408 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.03
AC027544.1-201ENST00000538408 WIZO95785 1651 aa15.19■□□□□ 0.02
AC027544.1-201ENST00000538408 PIP4P2Q8N4L2 257 aa15.19■□□□□ 0.02
AC027544.1-201ENST00000538408 BICRAQ9NZM4 1560 aa15.15■□□□□ 0.02
AC027544.1-201ENST00000538408 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
AC027544.1-201ENST00000538408 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
AC027544.1-201ENST00000538408 HAX1O00165 279 aa15.1■□□□□ 0.01
AC027544.1-201ENST00000538408 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
AC027544.1-201ENST00000538408 FOXD4L1Q9NU39 408 aa15.1■□□□□ 0.01
AC027544.1-201ENST00000538408 PITPNM1O00562 1244 aa15.04■□□□□ -0
AC027544.1-201ENST00000538408 TOP2AP11388 1531 aaKnown RBP15.03■□□□□ -0
AC027544.1-201ENST00000538408 FXR2P51116 673 aaKnown RBP eCLIP15.03■□□□□ -0
AC027544.1-201ENST00000538408 EIF4G1Q04637 1599 aaKnown RBP15.02□□□□□ -0.01
AC027544.1-201ENST00000538408 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
AC027544.1-201ENST00000538408 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
AC027544.1-201ENST00000538408 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
AC027544.1-201ENST00000538408 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
AC027544.1-201ENST00000538408 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
AC027544.1-201ENST00000538408 EVX2Q03828 476 aa14.78□□□□□ -0.04
AC027544.1-201ENST00000538408 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
AC027544.1-201ENST00000538408 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
AC027544.1-201ENST00000538408 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
AC027544.1-201ENST00000538408 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
AC027544.1-201ENST00000538408 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
AC027544.1-201ENST00000538408 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
AC027544.1-201ENST00000538408 FBLN2P98095 1184 aa14.71□□□□□ -0.05
AC027544.1-201ENST00000538408 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
AC027544.1-201ENST00000538408 LOC105371045A0A1W2PR82 267 aa14.66□□□□□ -0.06
AC027544.1-201ENST00000538408 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
AC027544.1-201ENST00000538408 SPDYE1Q8NFV5 336 aaPredicted RBP14.65□□□□□ -0.06
AC027544.1-201ENST00000538408 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
AC027544.1-201ENST00000538408 ABCC8Q09428 1581 aa14.64□□□□□ -0.07
AC027544.1-201ENST00000538408 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
AC027544.1-201ENST00000538408 ZBTB22O15209 634 aa14.61□□□□□ -0.07
AC027544.1-201ENST00000538408 C19orf67A6NJJ6 358 aa14.56□□□□□ -0.08
AC027544.1-201ENST00000538408 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms